Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4679
Gene name
LocationContig_4:58679..60459
Strand-
Gene length (bp)1780
Transcript length (bp)1647
Coding sequence length (bp)1647
Protein length (aa) 549

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus GN=Pkd1l3 PE=1 SV=2 349 528 1.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4679
MRAAVCCLLVACIQAAALTTPDVSRNEIQRRKTPAEIVNDVLGAAGGAAGGGQGGGIGNLLGGLLGNIGGGNNGN
ARASPNRATTPANGRNSAGGGRTNPTRQGNGGTTPARGGNTGGRAPSRNNPAAGGDTDGNTGGRAPSRNSPAVGG
DIDGNTGGRAPSRNNPAVGGDIDGNTGGTVPGRNNPAVGGDIDGNTGGTAPGRNNPGVNPAIGGDMDGNTGGRAP
TRNSPAAVGGNTGNTECQCPSNSSSSGGNRRFDGLRVSFITVTETASGQAAAPSMAMATVTETVNHTMTVMGGGP
AMTVTVNHTMTMTAGADNTDRVIVIDPALVCGDQGGNGSNGGQRGASPVTSAASSRKTPVPVLPGNGNPADENGV
ASSVMLPQTPRKTTPAETDRAKAPSQEPAATEPAATEPAKAPVQEPAATEPAKAPSEEPAVKDPAVKDPVNDPAA
KEPVVQDPSTMTIPAESSTSTDPASQSPTSTLSSSSSSTEMTMPTDPAMAPPAAADPATEPGTPAPEPPVENNVQ
PPDVSGLKLKKMLNLGALEGDKS*
Coding >OphauG2|4679
ATGAGAGCCGCCGTCTGTTGTCTTTTGGTGGCCTGCATCCAAGCAGCGGCACTCACCACACCGGACGTCTCCAGG
AATGAAATCCAACGAAGAAAAACTCCTGCCGAAATCGTCAACGATGTTCTCGGAGCGGCAGGAGGAGCAGCAGGA
GGGGGACAAGGTGGAGGAATAGGCAATCTCTTGGGCGGCCTTCTGGGAAACATAGGCGGAGGCAATAATGGCAAC
GCCCGTGCCAGCCCGAATCGCGCCACGACTCCGGCCAACGGAAGAAACTCTGCTGGTGGAGGCCGTACCAACCCA
ACCCGTCAGGGCAATGGAGGCACTACCCCTGCCAGAGGCGGCAACACTGGAGGCAGAGCCCCATCCCGCAACAAT
CCTGCTGCCGGCGGCGACACTGACGGCAACACCGGAGGCAGAGCCCCATCCCGCAATAGTCCTGCTGTCGGCGGC
GACATTGACGGCAACACCGGAGGCAGAGCACCAAGCCGCAATAATCCTGCTGTCGGCGGCGACATTGACGGCAAC
ACTGGAGGCACAGTGCCAGGCCGCAATAATCCTGCTGTCGGCGGCGACATTGACGGCAACACTGGAGGCACAGCG
CCAGGCCGCAATAATCCTGGTGTTAACCCTGCTATCGGCGGCGACATGGACGGCAACACTGGAGGCAGAGCACCA
ACTCGCAACAGCCCTGCTGCTGTAGGCGGCAACACTGGCAACACCGAATGCCAATGCCCCAGCAACTCGTCGAGC
TCAGGCGGAAATAGAAGATTTGATGGCCTTCGCGTGTCCTTCATCACCGTCACCGAGACTGCCTCGGGCCAGGCC
GCCGCTCCCTCAATGGCAATGGCTACCGTCACCGAGACTGTCAACCACACCATGACCGTCATGGGCGGCGGACCA
GCCATGACGGTTACTGTCAATCACACCATGACCATGACGGCAGGTGCCGACAACACCGACAGAGTCATTGTCATT
GACCCGGCCCTAGTTTGTGGCGATCAAGGCGGAAACGGCTCCAACGGGGGTCAAAGGGGCGCCAGCCCAGTCACG
TCGGCGGCGTCGTCACGAAAGACGCCAGTTCCTGTGCTGCCGGGCAACGGCAACCCCGCTGACGAGAACGGGGTC
GCGTCATCCGTCATGTTGCCCCAGACCCCACGAAAGACGACTCCCGCTGAAACCGATAGAGCCAAGGCGCCCTCT
CAGGAGCCCGCCGCCACCGAGCCCGCCGCCACCGAGCCCGCCAAGGCGCCCGTTCAGGAGCCCGCCGCCACCGAG
CCCGCCAAGGCGCCCTCTGAGGAGCCTGCCGTCAAGGACCCCGCCGTCAAGGACCCCGTCAATGATCCCGCTGCC
AAGGAACCCGTGGTTCAAGACCCATCCACAATGACTATACCGGCGGAATCATCAACATCGACCGATCCCGCCAGC
CAGAGCCCAACTTCCACGCTCTCATCCTCGAGCAGTTCGACCGAAATGACTATGCCAACTGACCCTGCTATGGCG
CCACCTGCCGCTGCTGACCCTGCTACGGAACCCGGCACCCCTGCCCCTGAGCCCCCAGTGGAAAATAACGTGCAG
CCTCCCGACGTCAGTGGACTCAAGCTGAAAAAGATGCTGAATCTGGGCGCTTTGGAAGGCGACAAGTCGTAA
Transcript >OphauG2|4679
ATGAGAGCCGCCGTCTGTTGTCTTTTGGTGGCCTGCATCCAAGCAGCGGCACTCACCACACCGGACGTCTCCAGG
AATGAAATCCAACGAAGAAAAACTCCTGCCGAAATCGTCAACGATGTTCTCGGAGCGGCAGGAGGAGCAGCAGGA
GGGGGACAAGGTGGAGGAATAGGCAATCTCTTGGGCGGCCTTCTGGGAAACATAGGCGGAGGCAATAATGGCAAC
GCCCGTGCCAGCCCGAATCGCGCCACGACTCCGGCCAACGGAAGAAACTCTGCTGGTGGAGGCCGTACCAACCCA
ACCCGTCAGGGCAATGGAGGCACTACCCCTGCCAGAGGCGGCAACACTGGAGGCAGAGCCCCATCCCGCAACAAT
CCTGCTGCCGGCGGCGACACTGACGGCAACACCGGAGGCAGAGCCCCATCCCGCAATAGTCCTGCTGTCGGCGGC
GACATTGACGGCAACACCGGAGGCAGAGCACCAAGCCGCAATAATCCTGCTGTCGGCGGCGACATTGACGGCAAC
ACTGGAGGCACAGTGCCAGGCCGCAATAATCCTGCTGTCGGCGGCGACATTGACGGCAACACTGGAGGCACAGCG
CCAGGCCGCAATAATCCTGGTGTTAACCCTGCTATCGGCGGCGACATGGACGGCAACACTGGAGGCAGAGCACCA
ACTCGCAACAGCCCTGCTGCTGTAGGCGGCAACACTGGCAACACCGAATGCCAATGCCCCAGCAACTCGTCGAGC
TCAGGCGGAAATAGAAGATTTGATGGCCTTCGCGTGTCCTTCATCACCGTCACCGAGACTGCCTCGGGCCAGGCC
GCCGCTCCCTCAATGGCAATGGCTACCGTCACCGAGACTGTCAACCACACCATGACCGTCATGGGCGGCGGACCA
GCCATGACGGTTACTGTCAATCACACCATGACCATGACGGCAGGTGCCGACAACACCGACAGAGTCATTGTCATT
GACCCGGCCCTAGTTTGTGGCGATCAAGGCGGAAACGGCTCCAACGGGGGTCAAAGGGGCGCCAGCCCAGTCACG
TCGGCGGCGTCGTCACGAAAGACGCCAGTTCCTGTGCTGCCGGGCAACGGCAACCCCGCTGACGAGAACGGGGTC
GCGTCATCCGTCATGTTGCCCCAGACCCCACGAAAGACGACTCCCGCTGAAACCGATAGAGCCAAGGCGCCCTCT
CAGGAGCCCGCCGCCACCGAGCCCGCCGCCACCGAGCCCGCCAAGGCGCCCGTTCAGGAGCCCGCCGCCACCGAG
CCCGCCAAGGCGCCCTCTGAGGAGCCTGCCGTCAAGGACCCCGCCGTCAAGGACCCCGTCAATGATCCCGCTGCC
AAGGAACCCGTGGTTCAAGACCCATCCACAATGACTATACCGGCGGAATCATCAACATCGACCGATCCCGCCAGC
CAGAGCCCAACTTCCACGCTCTCATCCTCGAGCAGTTCGACCGAAATGACTATGCCAACTGACCCTGCTATGGCG
CCACCTGCCGCTGCTGACCCTGCTACGGAACCCGGCACCCCTGCCCCTGAGCCCCCAGTGGAAAATAACGTGCAG
CCTCCCGACGTCAGTGGACTCAAGCTGAAAAAGATGCTGAATCTGGGCGCTTTGGAAGGCGACAAGTCGTAA
Gene >OphauG2|4679
ATGAGAGCCGCCGTCTGTTGTCTTTTGGTGGCCTGCATCCAAGCAGCGGCACTCACCACACCGGACGTCTCCAGG
AATGAAATCCAACGAAGAAAAACTCCTGCCGAAATCGTCAACGATGTTCTCGGAGCGGCAGGAGGAGCAGCAGGA
GGGGGACAAGGTGGAGGAATAGGCAATCTCTTGGGCGGCCTTCTGGGAAACATAGGCGGAGGCAATAATGGCAAC
GCCCGTGCCAGCCCGAATCGCGCCACGACTCCGGCCAACGGAAGAAACTCTGCTGGTGGAGGCCGTACCAACCCA
ACCCGTCAGGGCAATGGAGGCACTACCCCTGCCAGAGGCGGCAACACTGGAGGCAGAGCCCCATCCCGCAACAAT
CCTGCTGCCGGCGGCGACACTGACGGCAACACCGGAGGCAGAGCCCCATCCCGCAATAGTCCTGCTGTCGGCGGC
GACATTGACGGCAACACCGGAGGCAGAGCACCAAGCCGCAATAATCCTGCTGTCGGCGGCGACATTGACGGCAAC
ACTGGAGGCACAGTGCCAGGCCGCAATAATCCTGCTGTCGGCGGCGACATTGACGGCAACACTGGAGGCACAGCG
CCAGGCCGCAATAATCCTGGTGTTAACCCTGCTATCGGCGGCGACATGGACGGCAACACTGGAGGCAGAGCACCA
ACTCGCAACAGCCCTGCTGCTGTAGGCGGCAACACTGGCAACACCGAATGCCAATGCCCCAGCAACTCGTCGAGC
TCAGGCGGAAATAGAAGATTTGATGGGTAAGCACACATCCAACAAGCCTCCCTCTCCCCCCCCAAGATGCAAAGT
CTAACCGCCTGTAATAGCCTTCGCGTGTCCTTCATCACCGTCACCGAGACTGCCTCGGGCCAGGCCGCCGCTCCC
TCAATGGCAATGGCTACCGTCACCGAGACTGTCAACCACACCATGACCGTCATGGGCGGCGGACCAGCCATGACG
GTTACTGTCAATCACACCATGACCATGACGGCAGGTGTAAGTGTCCTCGCGTCATGCCATGGAATCAAAAGAGGA
TGCCGATATTGACACTTTTTTGCTCTAGGCCGACAACACCGACAGAGTCATTGTCATTGACCCGGCCCTAGTTTG
TGGCGATCAAGGCGGAAACGGCTCCAACGGGGGTCAAAGGGGCGCCAGCCCAGTCACGTCGGCGGCGTCGTCACG
AAAGACGCCAGTTCCTGTGCTGCCGGGCAACGGCAACCCCGCTGACGAGAACGGGGTCGCGTCATCCGTCATGTT
GCCCCAGACCCCACGAAAGACGACTCCCGCTGAAACCGATAGAGCCAAGGCGCCCTCTCAGGAGCCCGCCGCCAC
CGAGCCCGCCGCCACCGAGCCCGCCAAGGCGCCCGTTCAGGAGCCCGCCGCCACCGAGCCCGCCAAGGCGCCCTC
TGAGGAGCCTGCCGTCAAGGACCCCGCCGTCAAGGACCCCGTCAATGATCCCGCTGCCAAGGAACCCGTGGTTCA
AGACCCATCCACAATGACTATACCGGCGGAATCATCAACATCGACCGATCCCGCCAGCCAGAGCCCAACTTCCAC
GCTCTCATCCTCGAGCAGTTCGACCGAAATGACTATGCCAACTGACCCTGCTATGGCGCCACCTGCCGCTGCTGA
CCCTGCTACGGAACCCGGCACCCCTGCCCCTGAGCCCCCAGTGGAAAATAACGTGCAGCCTCCCGACGTCAGTGG
ACTCAAGCTGAAAAAGATGCTGAATCTGGGCGCTTTGGAAGGCGACAAGTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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