Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4650
Gene name
LocationContig_399:4396..5682
Strand+
Gene length (bp)1286
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01393 Chromo_shadow Chromo shadow domain 1.6E-17 195 249
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.7E-12 81 133

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O42934|CHP2_SCHPO Chromo domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=chp2 PE=3 SV=1 78 250 6.0E-19
sp|P40381|SWI6_SCHPO Chromatin-associated protein swi6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swi6 PE=1 SV=1 194 254 3.0E-14

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0043229 intracellular organelle No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043226 organelle No
GO:0043227 membrane-bounded organelle No
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4196
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4650 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|4585
Ophiocordyceps camponoti-floridani Ophcf2|01265
Ophiocordyceps camponoti-rufipedis Ophun1|802
Ophiocordyceps kimflemingae Ophio5|8488
Ophiocordyceps subramaniannii Hirsu2|8528

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4650
MPPALSEDEASDMELQHGGSSSQSVSPDQDEVIHDAAPTSSKKGARKQKVEQVRQEEEGEEEEEEEEEEDDDGDD
LDEDEFIVESIKKHMVDVDGTLKFLVKWEGWDKKTDMTWEPEENLKESASEILEAYLESIGGRDSIFEETEKAVR
SKKRSRASGGATPASAKRSRKNGTHPSEMTPPATSKKWSPPAGSWEDEIETIDACEAEGNGKLVVYLIWKNGRKT
RHDTSIIYKKCPQKMLQFYERHVKIIRDEKAVEEA*
Coding >OphauG2|4650
ATGCCTCCAGCATTGAGCGAAGACGAGGCGTCGGACATGGAGCTGCAGCACGGCGGAAGCTCCAGCCAGTCAGTA
TCGCCAGACCAAGATGAAGTCATACATGATGCAGCTCCGACAAGCAGCAAAAAAGGCGCTCGCAAGCAAAAAGTC
GAACAAGTGAGACAAGAGGAAGAAGGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGATGGCGACGAT
CTGGATGAAGACGAGTTCATTGTAGAAAGCATCAAGAAACACATGGTTGACGTCGATGGCACTCTCAAATTTCTC
GTCAAGTGGGAGGGATGGGACAAGAAGACGGACATGACATGGGAGCCCGAAGAGAACCTCAAGGAATCCGCGTCG
GAAATACTCGAAGCCTATCTAGAGAGCATCGGTGGGCGAGACTCGATTTTTGAGGAGACGGAAAAGGCGGTGCGG
AGCAAGAAGCGTTCAAGGGCTTCGGGGGGTGCTACGCCTGCTTCAGCGAAGCGATCGCGCAAGAATGGCACACAT
CCATCTGAAATGACGCCTCCTGCGACATCTAAGAAATGGAGTCCTCCTGCCGGCTCTTGGGAGGACGAAATTGAA
ACAATTGACGCTTGCGAGGCCGAGGGCAATGGTAAGTTGGTTGTGTACCTGATTTGGAAGAATGGACGCAAAACC
AGGCACGACACGTCGATTATATACAAGAAGTGCCCGCAAAAGATGCTTCAGTTCTACGAGCGGCATGTCAAGATT
ATCAGGGATGAGAAGGCGGTTGAGGAAGCGTGA
Transcript >OphauG2|4650
ATGCCTCCAGCATTGAGCGAAGACGAGGCGTCGGACATGGAGCTGCAGCACGGCGGAAGCTCCAGCCAGTCAGTA
TCGCCAGACCAAGATGAAGTCATACATGATGCAGCTCCGACAAGCAGCAAAAAAGGCGCTCGCAAGCAAAAAGTC
GAACAAGTGAGACAAGAGGAAGAAGGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGATGGCGACGAT
CTGGATGAAGACGAGTTCATTGTAGAAAGCATCAAGAAACACATGGTTGACGTCGATGGCACTCTCAAATTTCTC
GTCAAGTGGGAGGGATGGGACAAGAAGACGGACATGACATGGGAGCCCGAAGAGAACCTCAAGGAATCCGCGTCG
GAAATACTCGAAGCCTATCTAGAGAGCATCGGTGGGCGAGACTCGATTTTTGAGGAGACGGAAAAGGCGGTGCGG
AGCAAGAAGCGTTCAAGGGCTTCGGGGGGTGCTACGCCTGCTTCAGCGAAGCGATCGCGCAAGAATGGCACACAT
CCATCTGAAATGACGCCTCCTGCGACATCTAAGAAATGGAGTCCTCCTGCCGGCTCTTGGGAGGACGAAATTGAA
ACAATTGACGCTTGCGAGGCCGAGGGCAATGGTAAGTTGGTTGTGTACCTGATTTGGAAGAATGGACGCAAAACC
AGGCACGACACGTCGATTATATACAAGAAGTGCCCGCAAAAGATGCTTCAGTTCTACGAGCGGCATGTCAAGATT
ATCAGGGATGAGAAGGCGGTTGAGGAAGCGTGA
Gene >OphauG2|4650
ATGCCTCCAGGTTCGTTTGCACTCTCTTGGTCGCCAATGACAATCACCCATCCTAGCCCGAGTCCCATGTTGTTG
CGTTGTGTCGGTCCCATTCCCATGCCGGAAAAAATATCCCTGCGCATACGGATCCCGTTGTTGCACGCTCCGTGA
CCCCTATCTGTCATGAAGAAAAAGGCCAGCGCTGCATCTGCATCTCGGCCCAATTCTCGCTCTCTCACTACCGCA
CGCTACCTGCAATGGCGCGCAGAGGACGTTCTGCTAAGAACAAGTTAGCATTGAGCGAAGACGAGGCGTCGGACA
TGGAGCTGCAGCACGGCGGAAGCTCCAGCCAGTCAGTATCGCCAGACCAAGATGAAGTCATACATGATGCAGCTC
CGACAAGCAGCAAAAAAGGCGCTCGCAAGCAAAAAGTCGAACAAGTGAGACAAGAGGAAGAAGGGGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGACGACGATGGCGACGATCTGGATGAAGACGAGTGTGGCTCCCCGAGATACTCCC
TGCGCCAGTACACACTAATTTCTGCGCAGGTTCATTGTAGAAAGCATCAAGAAACACATGGTTGACGTCGATGTG
AGAAGTCGAGCCTCTGCCAGTAGGTCGCCATGGTCACTGACTCGTGACAGGGCACTCTCAAATTTCTCGTCAAGT
GGGAGGGATGGGACAAGAAGACGGACATGACATGGGAGCCCGAAGAGAACCTCAAGTAAGTTTCTGGGGGGCGTA
GATTGAGGCGCCAAGTTGAATGGGTATGTGACTGACACATTGCAGGGAATCCGCGTCGGAAATACTCGAAGCCTA
TCTAGAGAGCATCGGTGGGCGAGACTCGATTTTTGAGGAGACGGAAAAGGCGGTGCGGAGCAAGAAGCGTTCAAG
GGCTTCGGGGGGTGCTACGCCTGCTTCAGCGAAGCGATCGCGCAAGAATGGCACACATCCATCTGAAATGACGCC
TCCTGCGACATCTAAGAAATGGAGTCCTCCTGCCGGCTCTTGGGAGGACGAAATTGAAACAATTGACGCTTGCGA
GGCCGAGGGCAATGGTAAGTTGGTTGTGTACCTGATTTGGAAGAATGGACGCAAAACCAGGCACGACACGTCGAT
TATATACAAGAAGTGCCCGCAAAAGGTATGGCGTCTAGCAATGGTGTATTCTACTCGAGTTGGATGCGTGCTTGC
TGACTATTCTGCACGCACAGATGCTTCAGTTCTACGAGCGGCATGTCAAGATTATCAGGGATGAGAAGGCGGTTG
AGGAAGCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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