© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4619 |
| Gene name | |
| Location | Contig_394:6447..8946 |
| Strand | + |
| Gene length (bp) | 2499 |
| Transcript length (bp) | 2187 |
| Coding sequence length (bp) | 2187 |
| Protein length (aa) | 729 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02516 | STT3 | Oligosaccharyl transferase STT3 subunit | 4.8E-75 | 21 | 234 |
| PF02516 | STT3 | Oligosaccharyl transferase STT3 subunit | 3.9E-50 | 234 | 483 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94335|STT3_SCHPO | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=stt3 PE=3 SV=1 | 21 | 718 | 0.0E+00 |
| sp|P39007|STT3_YEAST | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STT3 PE=1 SV=2 | 18 | 727 | 0.0E+00 |
| sp|P46975|STT3_CAEEL | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3 OS=Caenorhabditis elegans GN=stt-3 PE=1 SV=1 | 19 | 723 | 0.0E+00 |
| sp|Q3TDQ1|STT3B_MOUSE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Mus musculus GN=Stt3b PE=1 SV=2 | 18 | 720 | 0.0E+00 |
| sp|Q8TCJ2|STT3B_HUMAN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1 | 18 | 720 | 0.0E+00 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94335|STT3_SCHPO | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=stt3 PE=3 SV=1 | 21 | 718 | 0.0E+00 |
| sp|P39007|STT3_YEAST | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STT3 PE=1 SV=2 | 18 | 727 | 0.0E+00 |
| sp|P46975|STT3_CAEEL | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3 OS=Caenorhabditis elegans GN=stt-3 PE=1 SV=1 | 19 | 723 | 0.0E+00 |
| sp|Q3TDQ1|STT3B_MOUSE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Mus musculus GN=Stt3b PE=1 SV=2 | 18 | 720 | 0.0E+00 |
| sp|Q8TCJ2|STT3B_HUMAN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1 | 18 | 720 | 0.0E+00 |
| sp|Q5RCE2|STT3A_PONAB | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Pongo abelii GN=STT3A PE=2 SV=1 | 12 | 696 | 0.0E+00 |
| sp|P46977|STT3A_HUMAN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Homo sapiens GN=STT3A PE=1 SV=2 | 12 | 696 | 0.0E+00 |
| sp|P46978|STT3A_MOUSE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Mus musculus GN=Stt3a PE=1 SV=1 | 12 | 696 | 0.0E+00 |
| sp|Q2KJI2|STT3A_BOVIN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Bos taurus GN=STT3A PE=2 SV=1 | 12 | 696 | 0.0E+00 |
| sp|Q54NM9|STT3_DICDI | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS=Dictyostelium discoideum GN=stt3 PE=3 SV=1 | 3 | 694 | 0.0E+00 |
| sp|Q9FX21|STT3B_ARATH | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Arabidopsis thaliana GN=STT3B PE=2 SV=1 | 12 | 694 | 0.0E+00 |
| sp|Q7XQ88|STT3B_ORYSJ | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Oryza sativa subsp. japonica GN=STT3B PE=2 SV=2 | 12 | 694 | 0.0E+00 |
| sp|Q93ZY3|STT3A_ARATH | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Arabidopsis thaliana GN=STT3A PE=2 SV=1 | 19 | 719 | 0.0E+00 |
| sp|Q6F2Z1|STT3A_ORYSJ | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Oryza sativa subsp. japonica GN=STT3A PE=2 SV=1 | 26 | 697 | 0.0E+00 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0006486 | protein glycosylation | Yes |
| GO:0004576 | oligosaccharyl transferase activity | Yes |
| GO:0036211 | protein modification process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0005575 | cellular_component | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0070085 | glycosylation | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016757 | glycosyltransferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 83 | 105 | 22 |
| 3 | 118 | 137 | 19 |
| 4 | 147 | 167 | 20 |
| 5 | 174 | 191 | 17 |
| 6 | 196 | 218 | 22 |
| 7 | 223 | 245 | 22 |
| 8 | 250 | 269 | 19 |
| 9 | 281 | 303 | 22 |
| 10 | 340 | 362 | 22 |
| 11 | 369 | 386 | 17 |
| 12 | 390 | 409 | 19 |
| 13 | 450 | 472 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4619 MTVKDESILASINTESTRTLLRVVILCLIAAAAISSRLFSVIRFESIIHEFDPWFNFRATKYLVANGFYKFWDWF DDRTWHPLGRVTGGTLYPGLMVTSGVIYHVLQTLAIPVDIRNICVLLAPAFSGLTAFAAYLLTNEMTTSPSAGLL AAIFMGIAPGYISRSVAGSYDNEAIAIFLLVFTFYLWIKALKLGSMLWSAMCALFYGYMVASWGGYAFITCLLPL HAFVLICMAMQIPFVGFLPVKTSEHMPALGIFGFLQLIGFIQYVRSAITGRQFQTFVITILVATFGLGLIGLVAL TSMGYIAPWSGRFYSLWDTGYAKVHIPIIASVSEHQPPAWPAFFFDLNMLIWLFPAGIYLCYQDLRDEHVFVIVY GLFGSYFAGVMVRLMLTLTPIVCVAAAIAVSYLLDTYMTIKSADANKDQGASEATSKNKSKASGLRDSEKPVVGI FSYVSKTGVVTCLLVFLLMFVTHCTWVTSNAYSSPSVVLASRMPDGSQHIIDDYREAYQWLRQNTKYDAKIMSWW DYGYQIGGMADRPTLVDNNTWNNTHIATVGKAMSSREEVSYPIMRQHEVDYVLVVYGGLLGYSGDDINKFLWMVR IAEGIWPDEVKERDFFTSRGEYRVDGEATETMKNSLMYKMCYYNYHTMFPPGQAADRVRGVRLPDQGPVLNTLEE AFTSENWIIRIYKVKDLDNLGRDHAAAAAFERGQKKKKKDAGKKRTARVLRVD* |
| Coding | >OphauG2|4619 ATGACGGTCAAAGACGAGTCAATTCTGGCGAGCATCAATACAGAGAGCACGAGAACCTTGCTGCGAGTCGTCATT CTCTGTCTGATTGCAGCTGCCGCCATCTCGAGCCGTCTCTTCTCCGTGATCCGCTTCGAAAGTATAATTCACGAA TTTGATCCTTGGTTCAACTTCCGCGCAACCAAGTATCTCGTCGCCAATGGATTCTACAAGTTCTGGGATTGGTTC GATGACCGCACATGGCATCCTCTTGGTCGTGTCACCGGAGGCACTCTTTATCCCGGCCTCATGGTAACGAGTGGA GTCATCTATCACGTCCTTCAGACACTCGCCATTCCCGTTGACATCCGAAATATCTGTGTCCTTCTCGCTCCCGCC TTTTCGGGTTTGACGGCCTTTGCTGCCTATCTTCTGACCAATGAGATGACAACATCTCCCTCGGCTGGCCTTCTC GCCGCAATTTTCATGGGCATTGCGCCCGGTTATATCTCGAGATCGGTTGCGGGAAGCTATGACAACGAGGCCATT GCCATTTTCCTCCTCGTCTTCACCTTTTACCTCTGGATAAAGGCTCTCAAGCTGGGATCCATGCTCTGGAGCGCC ATGTGTGCCCTGTTTTATGGCTATATGGTGGCATCTTGGGGTGGCTATGCCTTTATTACTTGCCTATTACCTCTA CATGCCTTTGTTCTCATCTGCATGGCTATGCAGATTCCATTCGTTGGGTTTTTGCCTGTCAAGACTAGCGAGCAC ATGCCGGCACTGGGAATCTTTGGCTTTTTACAGCTTATTGGATTCATCCAATATGTGAGGTCTGCAATCACAGGG CGGCAATTTCAGACATTTGTCATTACTATTTTAGTTGCAACGTTTGGTCTGGGTCTCATTGGCCTTGTTGCTCTG ACGTCGATGGGGTACATTGCCCCGTGGAGTGGCCGCTTCTATTCTCTTTGGGATACGGGTTATGCCAAAGTGCAC ATTCCAATCATTGCGTCCGTGTCGGAACATCAGCCACCAGCCTGGCCAGCCTTCTTCTTCGACCTCAACATGCTC ATATGGCTCTTTCCAGCCGGCATCTATCTGTGCTACCAGGATCTACGAGATGAACACGTCTTTGTCATTGTCTAC GGGCTTTTTGGCAGCTACTTTGCGGGAGTCATGGTTCGACTGATGCTTACTCTAACACCCATTGTCTGCGTTGCG GCCGCTATTGCCGTATCATATCTTCTTGACACATACATGACAATCAAGTCGGCGGACGCCAACAAGGACCAAGGC GCCTCAGAGGCAACGTCCAAGAACAAGTCTAAAGCATCTGGGCTGCGGGACAGCGAGAAGCCGGTTGTTGGCATC TTTAGCTACGTTTCCAAGACGGGTGTCGTGACATGCTTGCTGGTGTTTTTGCTCATGTTTGTCACGCACTGCACA TGGGTCACGTCCAATGCCTATTCATCTCCTTCGGTTGTGTTGGCCAGTCGAATGCCCGACGGGAGTCAGCACATT ATTGACGACTACAGAGAGGCGTACCAATGGCTGCGGCAGAATACCAAGTATGATGCCAAGATTATGTCTTGGTGG GACTATGGCTATCAGATTGGGGGCATGGCTGACCGGCCGACGCTGGTGGACAATAACACGTGGAACAATACACAT ATCGCGACGGTGGGCAAGGCGATGAGCTCAAGAGAAGAGGTTAGCTATCCCATCATGCGACAGCACGAGGTGGAC TATGTGTTGGTGGTGTACGGTGGGCTATTAGGCTACTCGGGCGATGACATCAACAAGTTTTTGTGGATGGTGCGG ATTGCAGAAGGCATTTGGCCCGACGAGGTCAAGGAGCGAGACTTTTTTACATCGCGTGGCGAGTACCGTGTGGAT GGCGAGGCAACAGAAACCATGAAGAACAGCCTCATGTACAAGATGTGCTATTACAACTACCACACCATGTTCCCT CCCGGCCAGGCTGCCGACAGAGTGCGCGGGGTGCGTCTCCCAGACCAGGGGCCGGTGCTAAACACGCTTGAGGAG GCCTTTACCAGCGAGAACTGGATCATTCGCATTTACAAGGTCAAGGATCTTGATAATCTTGGGCGTGATCACGCG GCTGCAGCTGCCTTTGAGCGAGGGCAGAAGAAGAAGAAGAAGGATGCGGGCAAGAAGAGGACAGCGCGTGTGTTG CGGGTAGATTAG |
| Transcript | >OphauG2|4619 ATGACGGTCAAAGACGAGTCAATTCTGGCGAGCATCAATACAGAGAGCACGAGAACCTTGCTGCGAGTCGTCATT CTCTGTCTGATTGCAGCTGCCGCCATCTCGAGCCGTCTCTTCTCCGTGATCCGCTTCGAAAGTATAATTCACGAA TTTGATCCTTGGTTCAACTTCCGCGCAACCAAGTATCTCGTCGCCAATGGATTCTACAAGTTCTGGGATTGGTTC GATGACCGCACATGGCATCCTCTTGGTCGTGTCACCGGAGGCACTCTTTATCCCGGCCTCATGGTAACGAGTGGA GTCATCTATCACGTCCTTCAGACACTCGCCATTCCCGTTGACATCCGAAATATCTGTGTCCTTCTCGCTCCCGCC TTTTCGGGTTTGACGGCCTTTGCTGCCTATCTTCTGACCAATGAGATGACAACATCTCCCTCGGCTGGCCTTCTC GCCGCAATTTTCATGGGCATTGCGCCCGGTTATATCTCGAGATCGGTTGCGGGAAGCTATGACAACGAGGCCATT GCCATTTTCCTCCTCGTCTTCACCTTTTACCTCTGGATAAAGGCTCTCAAGCTGGGATCCATGCTCTGGAGCGCC ATGTGTGCCCTGTTTTATGGCTATATGGTGGCATCTTGGGGTGGCTATGCCTTTATTACTTGCCTATTACCTCTA CATGCCTTTGTTCTCATCTGCATGGCTATGCAGATTCCATTCGTTGGGTTTTTGCCTGTCAAGACTAGCGAGCAC ATGCCGGCACTGGGAATCTTTGGCTTTTTACAGCTTATTGGATTCATCCAATATGTGAGGTCTGCAATCACAGGG CGGCAATTTCAGACATTTGTCATTACTATTTTAGTTGCAACGTTTGGTCTGGGTCTCATTGGCCTTGTTGCTCTG ACGTCGATGGGGTACATTGCCCCGTGGAGTGGCCGCTTCTATTCTCTTTGGGATACGGGTTATGCCAAAGTGCAC ATTCCAATCATTGCGTCCGTGTCGGAACATCAGCCACCAGCCTGGCCAGCCTTCTTCTTCGACCTCAACATGCTC ATATGGCTCTTTCCAGCCGGCATCTATCTGTGCTACCAGGATCTACGAGATGAACACGTCTTTGTCATTGTCTAC GGGCTTTTTGGCAGCTACTTTGCGGGAGTCATGGTTCGACTGATGCTTACTCTAACACCCATTGTCTGCGTTGCG GCCGCTATTGCCGTATCATATCTTCTTGACACATACATGACAATCAAGTCGGCGGACGCCAACAAGGACCAAGGC GCCTCAGAGGCAACGTCCAAGAACAAGTCTAAAGCATCTGGGCTGCGGGACAGCGAGAAGCCGGTTGTTGGCATC TTTAGCTACGTTTCCAAGACGGGTGTCGTGACATGCTTGCTGGTGTTTTTGCTCATGTTTGTCACGCACTGCACA TGGGTCACGTCCAATGCCTATTCATCTCCTTCGGTTGTGTTGGCCAGTCGAATGCCCGACGGGAGTCAGCACATT ATTGACGACTACAGAGAGGCGTACCAATGGCTGCGGCAGAATACCAAGTATGATGCCAAGATTATGTCTTGGTGG GACTATGGCTATCAGATTGGGGGCATGGCTGACCGGCCGACGCTGGTGGACAATAACACGTGGAACAATACACAT ATCGCGACGGTGGGCAAGGCGATGAGCTCAAGAGAAGAGGTTAGCTATCCCATCATGCGACAGCACGAGGTGGAC TATGTGTTGGTGGTGTACGGTGGGCTATTAGGCTACTCGGGCGATGACATCAACAAGTTTTTGTGGATGGTGCGG ATTGCAGAAGGCATTTGGCCCGACGAGGTCAAGGAGCGAGACTTTTTTACATCGCGTGGCGAGTACCGTGTGGAT GGCGAGGCAACAGAAACCATGAAGAACAGCCTCATGTACAAGATGTGCTATTACAACTACCACACCATGTTCCCT CCCGGCCAGGCTGCCGACAGAGTGCGCGGGGTGCGTCTCCCAGACCAGGGGCCGGTGCTAAACACGCTTGAGGAG GCCTTTACCAGCGAGAACTGGATCATTCGCATTTACAAGGTCAAGGATCTTGATAATCTTGGGCGTGATCACGCG GCTGCAGCTGCCTTTGAGCGAGGGCAGAAGAAGAAGAAGAAGGATGCGGGCAAGAAGAGGACAGCGCGTGTGTTG CGGGTAGATTAG |
| Gene | >OphauG2|4619 ATGACGGTCAAAGACGAGTCAATTCTGGCGAGCATCAATACAGAGAGCACGAGAACCTTGCTGCGAGTCGTCATT CTCTGTCTGATTGCAGCTGCCGCCATCTCGAGCCGTCTCTTCTCCGTGATCCGTGAGCTTACTCCGAAACTTGAT CCGCCACTCAAAATAGCTGACTGTTTAGCCCAGGCTTCGAAAGTATAATTCACGAATGTCTGTACTTTCCAGTCT CCAGAAGAGGCCGAGACTCACAGGCTAATTTGATCAGTTGATCCTTGGTTCAACTTCCGCGCAACCAAGTATCTC GTCGCCAATGGATTCTACAAGTTCTGGGATTGGTTCGATGACCGCACATGGCATCCTCTTGGTCGTGTCACCGGA GGCACTCTTTATCCCGGCCTCATGGTAACGAGTGGAGTCATCTATCACGTCCTTCAGACACTCGCCATTCCCGTT GACATCCGAAATATCTGTGTCCTTCTCGCTCCCGCCTTTTCGGGTTTGACGGCCTTTGCTGCCTATCTTCTGACC AATGAGATGACAACATCTCCCTCGGCTGGCCTTCTCGCCGCAATTTTCATGGGCATTGCGCCCGGTTATATCTCG AGATCGGTTGCGGGAAGCTATGACAACGAGGCCATTGCCATTTTCCTCCTCGTCTTCACCTTTTACCTCTGGATA AAGGCTCTCAAGCTGGGATCCATGCTCTGGAGCGCCATGTGTGCCCTGTTTTATGGCTATATGGTGGCATCTTGG GGTGGCTATGCCTTTATTACTTGCCTATTACCTCTACATGCCTTTGTTCTCATCTGCATGGGTAGGTACAGCACT CGGCTTTATGTCAGCTATACAACATGGTACGCTCTCGGAACTCTTGCAGCTATGCAGATTCCATTCGTTGGGTTT TTGCCTGTCAAGACTAGCGAGCACATGCCGGCACTGGGTAAGCCTTTTTTTTTTTTTTTTTGTGTGTGTGTTTTA TTTTCTTGGAACTTGTCATTGACTGTTTTCTTTTTGTACAGGAATCTTTGGCTTTTTACAGCTTATTGGATTCAT CCAATATGTGAGGTCTGCAATCACAGGGCGGCAATTTCAGACATTTGTCATTACTATTTTAGTTGCAACGTTTGG TCTGGGTCTCATTGGCCTTGTTGCTCTGACGTCGATGGGGTACATTGCCCCGTGGAGTGGCCGCTTCTATTCTCT TTGGGATACGGGTTATGCCAAAGTGCACATTCCAATCATTGCGTCCGTGTCGGAACATCAGCCACCAGCCTGGCC AGCCTTCTTCTTCGACCTCAACATGCTCATATGGCTCTTTCCAGCCGGCATCTATCTGTGCTACCAGGATCTACG AGATGAACACGTCTTTGTCATTGTCTACGGGCTTTTTGGCAGCTACTTTGCGGGAGTCATGGTTCGACTGATGCT TACTCTAACACCCATTGTCTGCGTTGCGGCCGCTATTGCCGTATCATATCTTCTTGACACATACATGACAATCAA GTCGGCGGACGCCAACAAGGACCAAGGCGCCTCAGAGGCAACGTCCAAGAACAAGTCTAAAGCATCTGGGCTGCG GGACAGCGAGAAGCCGGTTGTTGGCATCTTTAGCTACGTTTCCAAGACGGGTGTCGTGACATGCTTGCTGGTGTT TTTGCTCATGTTTGTCACGCACTGCACATGGGTCACGTCCAATGCCTATTCATCTCCTTCGGTTGTGTTGGCCAG TCGAATGCCCGACGGGAGTCAGCACATTATTGACGACTACAGAGAGGCGTACCAATGGCTGCGGCAGAATACCAA GTATGATGCCAAGATTATGTCTTGGTGGGACTATGGCTATCAGATTGGGGGCATGGCTGACCGGCCGACGCTGGT GGACAATAACACGTGGAACAATACACATATCGCGACGGTGGGCAAGGCGATGAGCTCAAGAGAAGAGGTTAGCTA TCCCATCATGCGACAGCACGAGGTGGACTATGTGTTGGTGGTGTACGGTGGGCTATTAGGCTACTCGGGCGATGA CATCAACAAGTTTTTGTGGATGGTGCGGATTGCAGAAGGCATTTGGCCCGACGAGGTCAAGGAGCGAGACTTTTT TACATCGCGTGGCGAGTACCGTGTGGATGGCGAGGCAACAGAAACCATGAAGAACAGCCTCATGTGAGTTTGCCA TGGGGGCAATGGCGTTTGATGGAGAGTGGTCTGACAGTGGGCAACAGGTACAAGATGTGCTATTACAACTACCAC ACCATGTTCCCTCCCGGCCAGGCTGCCGACAGAGTGCGCGGGGTGCGTCTCCCAGACCAGGGGCCGGTGCTAAAC ACGCTTGAGGAGGCCTTTACCAGCGAGAACTGGATCATTCGCATTTACAAGGTCAAGGATCTTGATAATCTTGGG CGTGATCACGCGGCTGCAGCTGCCTTTGAGCGAGGGCAGAAGAAGAAGAAGAAGGATGCGGGCAAGAAGAGGACA GCGCGTGTGTTGCGGGTAGATTAG |