Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4531
Gene name
Location	Contig_383:2266..3544
Strand	-
Gene length (bp)	1278
Transcript length (bp)	1167
Coding sequence length (bp)	1167
Protein length (aa)	389

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01940	DUF92	Integral membrane protein DUF92	4.4E-86	9	367

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q96HH6\|TMM19_HUMAN	Transmembrane protein 19 OS=Homo sapiens GN=TMEM19 PE=1 SV=1	6	267	1.0E-22
sp\|Q5RF73\|TMM19_PONAB	Transmembrane protein 19 OS=Pongo abelii GN=TMEM19 PE=2 SV=1	6	267	5.0E-22
sp\|Q91W52\|TMM19_MOUSE	Transmembrane protein 19 OS=Mus musculus GN=Tmem19 PE=1 SV=1	4	266	3.0E-19
sp\|Q0P4L9\|TMM19_XENTR	Transmembrane protein 19 OS=Xenopus tropicalis GN=tmem19 PE=2 SV=1	5	267	2.0E-18
sp\|Q6P726\|TMM19_RAT	Transmembrane protein 19 OS=Rattus norvegicus GN=Tmem19 PE=2 SV=2	18	267	2.0E-16

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q96HH6\|TMM19_HUMAN	Transmembrane protein 19 OS=Homo sapiens GN=TMEM19 PE=1 SV=1	6	267	1.0E-22
sp\|Q5RF73\|TMM19_PONAB	Transmembrane protein 19 OS=Pongo abelii GN=TMEM19 PE=2 SV=1	6	267	5.0E-22
sp\|Q91W52\|TMM19_MOUSE	Transmembrane protein 19 OS=Mus musculus GN=Tmem19 PE=1 SV=1	4	266	3.0E-19
sp\|Q0P4L9\|TMM19_XENTR	Transmembrane protein 19 OS=Xenopus tropicalis GN=tmem19 PE=2 SV=1	5	267	2.0E-18
sp\|Q6P726\|TMM19_RAT	Transmembrane protein 19 OS=Rattus norvegicus GN=Tmem19 PE=2 SV=2	18	267	2.0E-16
sp\|Q6IR76\|TMM19_XENLA	Transmembrane protein 19 OS=Xenopus laevis GN=tmem19 PE=2 SV=1	5	267	3.0E-15
sp\|Q58343\|Y933_METJA	Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0933 PE=3 SV=1	129	256	6.0E-11

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GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No
GO:0031224	intrinsic component of membrane	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 61	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	36	58	22
2	182	204	22
3	231	253	22
4	358	380	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4531 MKTAVSIPAVALLVGYAWKKKSLTPLGLVAGALTGLVHAWHPWNLSFVLLLVFFLAGSRATRVKENVKAHLTTHS RGSSGPEGPRTQVQVLANSLMGSILTILHAIQLRRRAAAYADTDSPDPHGTMCFSWGGDLLVIGIIANYACVTAD TFSSELGILSRSEPRLITSPTLRKVPRGTNGGVTLLGLAAGMLGSLIVVTAAMLSLPVCTQETSHSLGGGIAWSL GQRRELMAFLVMWGTLGSVLDSVLGALFQRSVRDIRSGKIVEGEGGCRVLVSASTDTMVGGSVRRAEAMTAALGG HGGSTAAQKLNTCAIDEHQEETEGRSLPEKRHRRSSFGDERPSRVVESGWDLLDNNDVNFLMACMMSVGAMAVAS WYWAIPLESLMRL*
Coding	>OphauG2\|4531 ATGAAGACGGCCGTGTCCATTCCCGCAGTGGCATTGCTTGTTGGGTATGCGTGGAAGAAAAAATCGCTAACGCCA CTGGGCCTCGTCGCTGGCGCGCTAACAGGCCTTGTGCATGCCTGGCATCCGTGGAACCTTTCATTTGTCCTGCTC TTGGTCTTCTTCTTGGCTGGCTCTCGGGCTACTCGTGTCAAGGAAAATGTCAAGGCTCACTTAACAACGCACTCT AGGGGCAGCTCAGGACCAGAGGGGCCCCGTACGCAAGTCCAGGTCTTGGCAAACTCCCTCATGGGCTCTATTCTC ACCATTCTTCACGCCATTCAACTACGAAGGCGAGCTGCTGCCTATGCCGACACAGATTCGCCAGATCCGCATGGT ACAATGTGCTTCTCGTGGGGTGGCGATCTTCTCGTCATCGGCATCATTGCAAATTACGCCTGCGTCACGGCCGAC ACGTTCAGCTCAGAGCTTGGCATCTTGTCCAGGAGTGAACCACGGCTTATAACATCCCCGACTCTGCGGAAAGTG CCGCGGGGTACCAATGGGGGCGTCACCTTGCTGGGTCTAGCAGCCGGTATGTTGGGTTCTCTGATTGTTGTGACA GCTGCCATGTTATCGCTTCCCGTTTGCACCCAAGAAACTTCACACTCGTTGGGAGGTGGCATTGCCTGGTCACTG GGGCAGCGAAGAGAGTTGATGGCATTCTTGGTGATGTGGGGGACACTGGGGAGCGTCCTGGACAGTGTTCTCGGT GCCTTGTTTCAGCGATCTGTCCGTGACATTCGTTCAGGCAAAATTGTTGAGGGAGAGGGTGGCTGCCGCGTCCTC GTGTCGGCCAGCACAGATACCATGGTTGGAGGCTCTGTCAGACGTGCCGAGGCCATGACAGCAGCCCTTGGCGGG CATGGCGGTAGCACAGCTGCCCAGAAACTCAACACATGTGCTATTGACGAGCATCAAGAAGAAACTGAAGGCCGG TCACTACCAGAGAAAAGGCACCGCAGGTCGAGCTTCGGGGACGAACGGCCCTCACGTGTCGTGGAAAGTGGATGG GATCTTCTCGACAACAATGATGTAAACTTTCTCATGGCATGTATGATGAGCGTTGGTGCCATGGCTGTGGCCAGT TGGTATTGGGCTATTCCCTTGGAATCGCTGATGAGATTGTGA
Transcript	>OphauG2\|4531 ATGAAGACGGCCGTGTCCATTCCCGCAGTGGCATTGCTTGTTGGGTATGCGTGGAAGAAAAAATCGCTAACGCCA CTGGGCCTCGTCGCTGGCGCGCTAACAGGCCTTGTGCATGCCTGGCATCCGTGGAACCTTTCATTTGTCCTGCTC TTGGTCTTCTTCTTGGCTGGCTCTCGGGCTACTCGTGTCAAGGAAAATGTCAAGGCTCACTTAACAACGCACTCT AGGGGCAGCTCAGGACCAGAGGGGCCCCGTACGCAAGTCCAGGTCTTGGCAAACTCCCTCATGGGCTCTATTCTC ACCATTCTTCACGCCATTCAACTACGAAGGCGAGCTGCTGCCTATGCCGACACAGATTCGCCAGATCCGCATGGT ACAATGTGCTTCTCGTGGGGTGGCGATCTTCTCGTCATCGGCATCATTGCAAATTACGCCTGCGTCACGGCCGAC ACGTTCAGCTCAGAGCTTGGCATCTTGTCCAGGAGTGAACCACGGCTTATAACATCCCCGACTCTGCGGAAAGTG CCGCGGGGTACCAATGGGGGCGTCACCTTGCTGGGTCTAGCAGCCGGTATGTTGGGTTCTCTGATTGTTGTGACA GCTGCCATGTTATCGCTTCCCGTTTGCACCCAAGAAACTTCACACTCGTTGGGAGGTGGCATTGCCTGGTCACTG GGGCAGCGAAGAGAGTTGATGGCATTCTTGGTGATGTGGGGGACACTGGGGAGCGTCCTGGACAGTGTTCTCGGT GCCTTGTTTCAGCGATCTGTCCGTGACATTCGTTCAGGCAAAATTGTTGAGGGAGAGGGTGGCTGCCGCGTCCTC GTGTCGGCCAGCACAGATACCATGGTTGGAGGCTCTGTCAGACGTGCCGAGGCCATGACAGCAGCCCTTGGCGGG CATGGCGGTAGCACAGCTGCCCAGAAACTCAACACATGTGCTATTGACGAGCATCAAGAAGAAACTGAAGGCCGG TCACTACCAGAGAAAAGGCACCGCAGGTCGAGCTTCGGGGACGAACGGCCCTCACGTGTCGTGGAAAGTGGATGG GATCTTCTCGACAACAATGATGTAAACTTTCTCATGGCATGTATGATGAGCGTTGGTGCCATGGCTGTGGCCAGT TGGTATTGGGCTATTCCCTTGGAATCGCTGATGAGATTGTGA
Gene	>OphauG2\|4531 ATGAAGACGGCCGTGTCCATTCCCGCAGTGGCATTGCTTGTTGGGTATGCGTGGAAGAAAAAATCGCTAACGCCA CTGGGCCTCGTCGCTGGCGCGCTAACAGGCCTTGTGCATGCCTGGCATCCGTGGAACCTTTCATTTGTCCTGCTC TTGGTCTTCTTCTTGGCTGGCTCTCGGGCTACTCGTGTTTGTTCAAGTCGGCCTTGTTCGTGTCGCGTCTGCTGA CTTCTGGTGCAGGTCAAGGAAAATGTCAAGGCTCACTTAACAACGCACTCTAGGGGCAGCTCAGGACCAGAGGGG CCCCGTACGCAAGTCCAGGGCACGTTTCTTCCCCCGTTATTTCAGGTCTAGCAAAGCACGACTGACATGGAGCGT GCAGTCTTGGCAAACTCCCTCATGGGCTCTATTCTCACCATTCTTCACGCCATTCAACTACGAAGGCGAGCTGCT GCCTATGCCGACACAGATTCGCCAGATCCGCATGGTACAATGTGCTTCTCGTGGGGTGGCGATCTTCTCGTCATC GGCATCATTGCAAATTACGCCTGCGTCACGGCCGACACGTTCAGCTCAGAGCTTGGCATCTTGTCCAGGAGTGAA CCACGGCTTATAACATCCCCGACTCTGCGGAAAGTGCCGCGGGGTACCAATGGGGGCGTCACCTTGCTGGGTCTA GCAGCCGGTATGTTGGGTTCTCTGATTGTTGTGACAGCTGCCATGTTATCGCTTCCCGTTTGCACCCAAGAAACT TCACACTCGTTGGGAGGTGGCATTGCCTGGTCACTGGGGCAGCGAAGAGAGTTGATGGCATTCTTGGTGATGTGG GGGACACTGGGGAGCGTCCTGGACAGTGTTCTCGGTGCCTTGTTTCAGCGATCTGTCCGTGACATTCGTTCAGGC AAAATTGTTGAGGGAGAGGGTGGCTGCCGCGTCCTCGTGTCGGCCAGCACAGATACCATGGTTGGAGGCTCTGTC AGACGTGCCGAGGCCATGACAGCAGCCCTTGGCGGGCATGGCGGTAGCACAGCTGCCCAGAAACTCAACACATGT GCTATTGACGAGCATCAAGAAGAAACTGAAGGCCGGTCACTACCAGAGAAAAGGCACCGCAGGTCGAGCTTCGGG GACGAACGGCCCTCACGTGTCGTGGAAAGTGGATGGGATCTTCTCGACAACAATGATGTAAACTTTCTCATGGCA TGTATGATGAGCGTTGGTGCCATGGCTGTGGCCAGTTGGTATTGGGCTATTCCCTTGGAATCGCTGATGAGATTG TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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