© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4512 |
| Gene name | |
| Location | Contig_38:43755..45700 |
| Strand | + |
| Gene length (bp) | 1945 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20463 | PDH_C | Prephenate dehydrogenase, dimerization domain | 4.3E-06 | 166 | 265 |
| PF03446 | NAD_binding_2 | NAD binding domain of 6-phosphogluconate dehydrogenase | 2.0E-05 | 5 | 111 |
| PF03807 | F420_oxidored | NADP oxidoreductase coenzyme F420-dependent | 2.5E-04 | 5 | 86 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60078|TYR1_SCHPO | Probable prephenate dehydrogenase [NADP(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tyr1 PE=2 SV=1 | 2 | 449 | 1.0E-173 |
| sp|P20049|TYR1_YEAST | Prephenate dehydrogenase [NADP(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TYR1 PE=1 SV=2 | 5 | 450 | 1.0E-164 |
| sp|Q58029|Y612_METJA | Probable arogenate/prephenate dehydrogenase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0612 PE=3 SV=1 | 3 | 263 | 3.0E-17 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050661 | NADP binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4512 MQDFTVGLIGMGDMGKMYAERLSAAGWRLLACDREDRYDDLKKKYAGTVNLEICRNGHLVSRASDFILYSVEAAL IGGVIAQYGPSTKMGAIVGGQTSCKSPEIEAFEAHLPADVSIVSCHSLHGPSVDPRNQPLVLIQHRASDEALQKV EAVLTCLGSKYVYLTAQEHDRITADTQAVTHAAFLSMGKAWHANRQFPWELSRYVGGIENVKINTTLRIYSQKWH VYAGVAILNPEARKQIAQYAESVTQLYKLMLEGDIKGLRERVYLAREKVFGYASSSLSSSTTGEMAATSDNQSPT WTSRPLIEPDILSSFSLGIPTNDCVSRPNNHLSLLAMVDCWAALGIVPYEHMLCSTPLFRLRLGVTEHLFRDSRL LDETIHTAVYDKTYRSDDLEFTFAARGWAECVSLGHFETWKTRFISTQQFFEPRFEEAKTVGDKMMKKILQSTKD T* |
| Coding | >OphauG2|4512 ATGCAAGACTTCACCGTCGGCTTGATTGGCATGGGAGACATGGGCAAGATGTATGCCGAGCGGCTTTCTGCTGCT GGCTGGAGGCTTCTAGCCTGCGATAGAGAAGATAGATACGATGACCTCAAAAAGAAATATGCTGGCACAGTTAAC CTAGAAATCTGTCGCAACGGCCACCTTGTATCCCGTGCTAGCGACTTCATTCTGTACAGCGTCGAGGCTGCTCTA ATAGGAGGCGTTATTGCCCAATATGGACCATCTACTAAGATGGGCGCCATTGTCGGTGGTCAGACTTCGTGCAAG TCTCCCGAGATTGAAGCCTTCGAGGCACACCTTCCCGCCGACGTATCCATTGTCTCATGCCACTCACTGCATGGA CCCAGCGTCGACCCGCGCAACCAGCCGCTCGTCCTCATCCAGCATCGAGCTTCAGACGAGGCGTTGCAAAAGGTG GAGGCGGTACTGACATGTCTGGGCTCCAAATATGTTTATCTGACGGCCCAGGAACACGACCGCATCACAGCTGAC ACGCAAGCCGTCACCCATGCTGCCTTTCTTTCAATGGGCAAGGCCTGGCACGCCAACCGCCAGTTTCCCTGGGAA CTAAGCCGCTATGTTGGCGGTATCGAAAATGTCAAAATCAACACCACCTTACGAATATATAGCCAGAAGTGGCAC GTCTACGCCGGTGTCGCAATTTTAAACCCAGAGGCAAGAAAGCAGATCGCCCAGTATGCCGAGAGTGTCACTCAA CTCTATAAGCTCATGCTCGAGGGAGACATTAAGGGCCTTCGTGAGCGAGTCTACCTGGCCCGTGAAAAGGTCTTT GGTTATGCTTCGTCGTCTTTGTCGTCTTCTACCACTGGAGAGATGGCTGCTACTAGCGACAACCAATCTCCGACC TGGACCTCGCGGCCTCTAATTGAGCCCGATATCTTGTCCTCCTTCTCGCTCGGCATTCCTACCAACGACTGTGTC TCGAGGCCCAATAATCACCTTTCTCTGCTTGCCATGGTTGATTGCTGGGCTGCACTCGGAATTGTTCCCTATGAA CACATGCTATGTAGCACGCCTCTTTTCCGCCTTCGCCTTGGCGTAACGGAGCACCTATTTCGAGACTCTCGCCTC CTCGATGAGACTATACACACTGCCGTATACGACAAGACGTACCGCAGTGACGATCTTGAGTTTACATTTGCCGCT CGTGGCTGGGCAGAATGCGTGTCACTCGGCCACTTCGAAACCTGGAAGACGCGCTTTATCAGTACCCAACAATTT TTTGAGCCTCGGTTCGAAGAGGCTAAGACTGTTGGTGATAAGATGATGAAAAAAATACTACAAAGCACAAAAGAC ACTTGA |
| Transcript | >OphauG2|4512 ATGCAAGACTTCACCGTCGGCTTGATTGGCATGGGAGACATGGGCAAGATGTATGCCGAGCGGCTTTCTGCTGCT GGCTGGAGGCTTCTAGCCTGCGATAGAGAAGATAGATACGATGACCTCAAAAAGAAATATGCTGGCACAGTTAAC CTAGAAATCTGTCGCAACGGCCACCTTGTATCCCGTGCTAGCGACTTCATTCTGTACAGCGTCGAGGCTGCTCTA ATAGGAGGCGTTATTGCCCAATATGGACCATCTACTAAGATGGGCGCCATTGTCGGTGGTCAGACTTCGTGCAAG TCTCCCGAGATTGAAGCCTTCGAGGCACACCTTCCCGCCGACGTATCCATTGTCTCATGCCACTCACTGCATGGA CCCAGCGTCGACCCGCGCAACCAGCCGCTCGTCCTCATCCAGCATCGAGCTTCAGACGAGGCGTTGCAAAAGGTG GAGGCGGTACTGACATGTCTGGGCTCCAAATATGTTTATCTGACGGCCCAGGAACACGACCGCATCACAGCTGAC ACGCAAGCCGTCACCCATGCTGCCTTTCTTTCAATGGGCAAGGCCTGGCACGCCAACCGCCAGTTTCCCTGGGAA CTAAGCCGCTATGTTGGCGGTATCGAAAATGTCAAAATCAACACCACCTTACGAATATATAGCCAGAAGTGGCAC GTCTACGCCGGTGTCGCAATTTTAAACCCAGAGGCAAGAAAGCAGATCGCCCAGTATGCCGAGAGTGTCACTCAA CTCTATAAGCTCATGCTCGAGGGAGACATTAAGGGCCTTCGTGAGCGAGTCTACCTGGCCCGTGAAAAGGTCTTT GGTTATGCTTCGTCGTCTTTGTCGTCTTCTACCACTGGAGAGATGGCTGCTACTAGCGACAACCAATCTCCGACC TGGACCTCGCGGCCTCTAATTGAGCCCGATATCTTGTCCTCCTTCTCGCTCGGCATTCCTACCAACGACTGTGTC TCGAGGCCCAATAATCACCTTTCTCTGCTTGCCATGGTTGATTGCTGGGCTGCACTCGGAATTGTTCCCTATGAA CACATGCTATGTAGCACGCCTCTTTTCCGCCTTCGCCTTGGCGTAACGGAGCACCTATTTCGAGACTCTCGCCTC CTCGATGAGACTATACACACTGCCGTATACGACAAGACGTACCGCAGTGACGATCTTGAGTTTACATTTGCCGCT CGTGGCTGGGCAGAATGCGTGTCACTCGGCCACTTCGAAACCTGGAAGACGCGCTTTATCAGTACCCAACAATTT TTTGAGCCTCGGTTCGAAGAGGCTAAGACTGTTGGTGATAAGATGATGAAAAAAATACTACAAAGCACAAAAGAC ACTTGA |
| Gene | >OphauG2|4512 ATGCAAGACTTCACCGTCGGCTTGATTGGCATGGGAGACATGGGCAAGATGTATGCCGAGCGGCTTTCTGCTGCT GGCTGGAGGTGAGTTGCTACCACTGGTGGCGGCCCTTTGATGCCATGGTGAGTTCTTCTTGGCCACTTCTTCTTT TTTCTCTCCCATTTTCCTCCATAATGATGACTAGAGCGCATTTGGCTCGAGTATTGTCCAGGGGCTGCCTGGGGT CCGTTCCGGCGCTCAGGCTTTGTCCCTGGCTTTCGTTGATGAAAATGCTAGCTACCTTTTCATATCATTTGTCTG ATTGAGCACCTTGTGCAAATTTGATGATTTCACGCTCGACTGCTTCTCGAACTTGTTCTGGATGCTGACGATTGT CGTTTTAGATCCCGTGAAAAAACGAATGAATGACATATGCCGACAGCTTTGTGCACAAAACAGGCTTCTAGCCTG CGATAGAGAAGATAGATACGATGACCTCAAAAAGAAATATGCTGGCACAGTACGACTGCCCCACATCTTCGTTCT GCTTGCCTGCTCCTCGACTCTGCTGCCTTGTTGTGCTTCTCTTGTCTGCTGCATGGGCCATATTTAAACAATACT TAGCAACACTTACTGAATGGTGCTCTTGTCAGGTTAACCTAGAAATCTGTCGCAACGGCCACCTTGTATCCCGTG CTAGCGACTTCATTCTGTACAGCGTCGAGGCTGCTCTAATAGGAGGCGTTATTGCCCAATATGGACCATGTATGA TGAGCCAGCCTCGCCTTTTATCTCGTGCCCATTGCCCTTGATGCGGCCTCCCCTCCTAGTTACCGATCAATTCTC ATGACAAACCGTGCACACAGCTACTAAGATGGGCGCCATTGTCGGTGGTCAGACTTCGTGCAAGTCTCCCGAGAT TGAAGCCTTCGAGGCACACCTTCCCGCCGACGTATCCATTGTCTCATGCCACTCACTGCATGGACCCAGCGTCGA CCCGCGCAACCAGCCGCTCGTCCTCATCCAGCATCGAGCTTCAGACGAGGCGTTGCAAAAGGTGGAGGCGGTACT GACATGTCTGGGCTCCAAATATGTTTATCTGACGGCCCAGGAACACGACCGCATCACAGCTGACACGCAAGCCGT CACCCATGCTGCCTTTCTTTCAATGGGCAAGGCCTGGCACGCCAACCGCCAGTTTCCCTGGGAACTAAGCCGCTA TGTTGGCGGTATCGAAAATGTCAAAATCAACACCACCTTACGAATATATAGCCAGAAGTGGCACGTCTACGCCGG TGTCGCAATTTTAAACCCAGAGGCAAGAAAGCAGATCGCCCAGTATGCCGAGAGTGTCACTCAACTCTATAAGCT CATGCTCGAGGGAGACATTAAGGGCCTTCGTGAGCGAGTCTACCTGGCCCGTGAAAAGGTCTTTGGTTATGCTTC GTCGTCTTTGTCGTCTTCTACCACTGGAGAGATGGCTGCTACTAGCGACAACCAATCTCCGACCTGGACCTCGCG GCCTCTAATTGAGCCCGATATCTTGTCCTCCTTCTCGCTCGGCATTCCTACCAACGACTGTGTCTCGAGGCCCAA TAATCACCTTTCTCTGCTTGCCATGGTTGATTGCTGGGCTGCACTCGGAATTGTTCCCTATGAACACATGCTATG TAGCACGCCTCTTTTCCGCCTTCGCCTTGGCGTAACGGAGCACCTATTTCGAGACTCTCGCCTCCTCGATGAGAC TATACACACTGCCGTATACGACAAGACGTACCGCAGTGACGATCTTGAGTTTACATTTGCCGCTCGTGGCTGGGC AGAATGCGTGTCACTCGGCCACTTCGAAACCTGGAAGACGCGCTTTATCAGTACCCAACAATTTTTTGAGCCTCG GTTCGAAGAGGCTAAGACTGTTGGTGATAAGATGATGAAAAAAATACTACAAAGCACAAAAGACACTTGA |