Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4438
Gene name
Location	Contig_370:14231..17178
Strand	+
Gene length (bp)	2947
Transcript length (bp)	2526
Coding sequence length (bp)	2526
Protein length (aa)	842

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01585	G-patch	G-patch domain	1.8E-07	760	803

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P87143\|YDMD_SCHPO	Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=3 SV=1	178	807	6.0E-19
sp\|A4IGK4\|RBM5_XENTR	RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1	651	840	8.0E-08
sp\|A0JMV4\|RBM5A_XENLA	RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1	651	840	2.0E-07
sp\|Q99KG3\|RBM10_MOUSE	RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1	651	808	8.0E-07
sp\|P98175\|RBM10_HUMAN	RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3	651	808	9.0E-07

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P87143\|YDMD_SCHPO	Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=3 SV=1	178	807	6.0E-19
sp\|A4IGK4\|RBM5_XENTR	RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1	651	840	8.0E-08
sp\|A0JMV4\|RBM5A_XENLA	RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1	651	840	2.0E-07
sp\|Q99KG3\|RBM10_MOUSE	RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1	651	808	8.0E-07
sp\|P98175\|RBM10_HUMAN	RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3	651	808	9.0E-07
sp\|Q91YE7\|RBM5_MOUSE	RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1	652	808	1.0E-06
sp\|B2GV05\|RBM5_RAT	RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=1 SV=1	652	808	1.0E-06
sp\|P70501\|RBM10_RAT	RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=1 SV=1	651	808	1.0E-06
sp\|Q1RMU5\|RBM5_BOVIN	RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1	652	808	1.0E-06
sp\|P52756\|RBM5_HUMAN	RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2	652	808	1.0E-06
sp\|Q6DDU9\|RBM5B_XENLA	RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1	704	840	2.0E-06

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GO

GO Term	Description	Terminal node
GO:0003676	nucleic acid binding	Yes
GO:0003674	molecular_function	No
GO:1901363	heterocyclic compound binding	No
GO:0005488	binding	No
GO:0097159	organic cyclic compound binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 13	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4438 MREYYRERSPARGMRRDDHRPPLRGSDDSRDERDDVHRSPSRRDYNCVKRELSDDESNYTDRPPRGRFEPYRGRH DGMSPRRYHDARRSRYDAWHDSHHHDMYQDAPRLGRRSRDPHRPDPLLPDGYMHQDDAQRSSPRRYAPHDSDPLD HPIKHEFDGQRAIKHEFDGQRAIKHEFDGQRAPPTWSSRDGRSRSRSKPRFSAAGPPSRTVVVDGLPLGLSDRAA HECLFQANSFADSCLDLRLVPSRGFCRAYLDFVNCGRAVSFVRMLFPTFHVTVPRPAGDGPPMDCQLSIGFFRKR RNSDSENAQGAPNTCSFDWLCPQCAFNNFASRDKCKQCGCPVPALSATPALAPTPGSLGRTGAADIGRDVDQKVQ ILVVYPLPRDMDETMFANEMKRLELVKMDKPKEGAPKLRSTAPSVDGAGYGARQGSLHRVFLMRDVHTNASLRYG FAEFWTLPDALAALKKVQMTRCFEIGGTPVTIASIHLGVFVPEERELTPAIEAVSFVPLFNPSLRVRYRDVEVCP SCSMVSPKPLVEDEGPKPAQDDVKGDAQKQKKRKADDSFAESAAAAKKPPVMAAQLAVWKRKHNEIRGDDEAVQT DASGAEQQSPIKFSLSGAKPGASAAKTMAATGSEPQGQPAAPNYADPAYYIDRERLMCLICMMRYKSLGDVAIHE KSRNHQNAMQDKAKVDAAIARIVARQQMVEKQKNGSCQYRDRAKERREAHNQPVKPMASSKSESQQQQSSSAKNE GGKAKAGNADSKGAGMLAKMGWTTGAALGARGEGLGAALAASAYKEGVGLGAEGGKLGDAAEVAESRTTNSYASY VKATKEKARERYNQLG*
Coding	>OphauG2\|4438 ATGCGCGAGTACTACCGCGAGCGATCCCCCGCCCGAGGGATGCGACGTGACGACCACAGGCCTCCTCTGCGAGGC AGCGACGACAGCCGAGACGAGCGAGACGATGTGCATCGGTCTCCCTCGAGGCGCGACTACAACTGCGTCAAAAGG GAGCTGTCTGATGACGAATCTAATTACACCGACCGTCCCCCTCGCGGTCGCTTTGAGCCCTATCGCGGCCGTCAT GATGGCATGTCGCCCAGGAGATACCATGATGCACGTCGCTCGCGCTATGACGCCTGGCACGACTCTCACCATCAT GACATGTACCAAGATGCCCCTCGCCTTGGTCGTCGCTCGCGAGACCCTCACCGTCCGGACCCCCTCCTGCCAGAT GGCTACATGCACCAAGACGACGCCCAACGCTCCTCTCCTCGTAGATATGCCCCCCACGACTCAGACCCCTTGGAC CACCCAATCAAGCACGAGTTTGATGGCCAACGTGCGATCAAGCACGAGTTTGATGGCCAACGTGCGATCAAGCAC GAGTTTGATGGCCAACGTGCGCCTCCAACATGGTCCTCTCGCGATGGTCGCTCCAGGAGCCGCTCCAAACCCCGT TTCAGCGCTGCTGGACCCCCAAGCCGCACAGTCGTCGTCGACGGCTTGCCCTTGGGCCTGTCGGACAGAGCCGCT CATGAGTGTCTCTTCCAAGCCAACTCGTTTGCTGACTCGTGTCTTGACCTTCGACTGGTGCCATCTCGAGGCTTT TGCCGCGCCTATCTGGACTTTGTAAACTGTGGCCGTGCTGTTAGCTTTGTCAGAATGCTATTTCCAACTTTTCAC GTCACGGTGCCGCGCCCAGCTGGCGACGGCCCGCCCATGGACTGCCAACTCTCTATTGGCTTTTTTCGCAAGCGC CGAAACTCGGACAGTGAAAACGCCCAAGGTGCACCCAACACTTGCTCTTTCGACTGGCTGTGCCCCCAATGCGCT TTCAACAACTTTGCTTCGCGTGATAAGTGCAAGCAATGCGGCTGCCCAGTCCCAGCCCTTTCAGCCACGCCAGCC CTTGCTCCAACTCCAGGCTCACTTGGCCGCACCGGCGCGGCTGACATTGGCCGAGATGTTGACCAAAAGGTTCAG ATTCTCGTTGTCTACCCGCTGCCGCGAGACATGGACGAGACCATGTTTGCCAACGAGATGAAGCGCCTGGAGCTG GTCAAGATGGACAAGCCCAAAGAAGGTGCTCCCAAGCTGCGCTCAACTGCCCCTTCGGTAGACGGAGCTGGCTAC GGAGCTCGCCAGGGATCCCTTCATCGCGTCTTTCTCATGCGCGACGTGCACACCAATGCATCGCTCAGATATGGC TTTGCTGAGTTTTGGACCCTGCCCGACGCCCTTGCCGCTCTCAAAAAGGTGCAGATGACACGATGCTTTGAGATT GGCGGCACCCCCGTCACTATTGCCTCGATTCATTTGGGCGTCTTTGTCCCAGAGGAACGCGAATTGACGCCAGCC ATTGAGGCCGTGTCATTTGTCCCGCTCTTCAATCCTTCGCTTCGGGTCCGATACCGAGATGTGGAAGTTTGTCCG AGTTGTAGCATGGTTTCCCCGAAGCCTCTTGTCGAAGACGAAGGGCCCAAGCCAGCTCAGGACGACGTCAAGGGC GACGCTCAGAAGCAGAAGAAGCGCAAGGCCGATGACAGCTTTGCAGAGTCGGCGGCGGCGGCCAAGAAACCACCC GTCATGGCTGCCCAGCTGGCCGTCTGGAAGCGCAAGCACAACGAAATCCGTGGCGACGACGAAGCGGTGCAGACT GACGCGAGTGGTGCGGAGCAGCAATCGCCCATCAAATTCTCGCTTTCTGGCGCCAAGCCTGGCGCGTCAGCAGCA AAGACCATGGCGGCTACTGGCTCGGAGCCGCAGGGCCAGCCAGCAGCCCCAAACTATGCCGACCCTGCTTATTAC ATTGACAGAGAGCGCCTCATGTGCCTGATTTGCATGATGCGGTACAAGTCATTGGGCGATGTAGCCATTCACGAA AAGTCGCGCAACCACCAGAATGCCATGCAAGACAAGGCCAAGGTGGATGCTGCCATTGCGCGCATTGTTGCGAGG CAGCAGATGGTTGAAAAGCAGAAAAACGGGTCCTGTCAGTATCGTGACCGAGCCAAAGAGCGTCGCGAGGCGCAC AACCAGCCCGTTAAGCCAATGGCAAGCTCCAAGTCGGAATCTCAGCAACAGCAAAGCTCGTCGGCCAAGAATGAA GGCGGAAAAGCCAAGGCGGGCAACGCAGACTCCAAGGGAGCGGGCATGCTGGCCAAGATGGGCTGGACGACGGGA GCTGCCCTGGGAGCTCGAGGCGAGGGTCTTGGCGCAGCCCTTGCGGCCAGTGCTTATAAAGAGGGTGTTGGCTTG GGAGCCGAGGGTGGCAAGCTGGGCGATGCAGCCGAGGTTGCCGAATCGCGCACGACTAACAGCTATGCTAGCTAC GTCAAGGCCACCAAGGAAAAGGCGCGCGAGCGCTACAACCAGCTGGGATGA
Transcript	>OphauG2\|4438 ATGCGCGAGTACTACCGCGAGCGATCCCCCGCCCGAGGGATGCGACGTGACGACCACAGGCCTCCTCTGCGAGGC AGCGACGACAGCCGAGACGAGCGAGACGATGTGCATCGGTCTCCCTCGAGGCGCGACTACAACTGCGTCAAAAGG GAGCTGTCTGATGACGAATCTAATTACACCGACCGTCCCCCTCGCGGTCGCTTTGAGCCCTATCGCGGCCGTCAT GATGGCATGTCGCCCAGGAGATACCATGATGCACGTCGCTCGCGCTATGACGCCTGGCACGACTCTCACCATCAT GACATGTACCAAGATGCCCCTCGCCTTGGTCGTCGCTCGCGAGACCCTCACCGTCCGGACCCCCTCCTGCCAGAT GGCTACATGCACCAAGACGACGCCCAACGCTCCTCTCCTCGTAGATATGCCCCCCACGACTCAGACCCCTTGGAC CACCCAATCAAGCACGAGTTTGATGGCCAACGTGCGATCAAGCACGAGTTTGATGGCCAACGTGCGATCAAGCAC GAGTTTGATGGCCAACGTGCGCCTCCAACATGGTCCTCTCGCGATGGTCGCTCCAGGAGCCGCTCCAAACCCCGT TTCAGCGCTGCTGGACCCCCAAGCCGCACAGTCGTCGTCGACGGCTTGCCCTTGGGCCTGTCGGACAGAGCCGCT CATGAGTGTCTCTTCCAAGCCAACTCGTTTGCTGACTCGTGTCTTGACCTTCGACTGGTGCCATCTCGAGGCTTT TGCCGCGCCTATCTGGACTTTGTAAACTGTGGCCGTGCTGTTAGCTTTGTCAGAATGCTATTTCCAACTTTTCAC GTCACGGTGCCGCGCCCAGCTGGCGACGGCCCGCCCATGGACTGCCAACTCTCTATTGGCTTTTTTCGCAAGCGC CGAAACTCGGACAGTGAAAACGCCCAAGGTGCACCCAACACTTGCTCTTTCGACTGGCTGTGCCCCCAATGCGCT TTCAACAACTTTGCTTCGCGTGATAAGTGCAAGCAATGCGGCTGCCCAGTCCCAGCCCTTTCAGCCACGCCAGCC CTTGCTCCAACTCCAGGCTCACTTGGCCGCACCGGCGCGGCTGACATTGGCCGAGATGTTGACCAAAAGGTTCAG ATTCTCGTTGTCTACCCGCTGCCGCGAGACATGGACGAGACCATGTTTGCCAACGAGATGAAGCGCCTGGAGCTG GTCAAGATGGACAAGCCCAAAGAAGGTGCTCCCAAGCTGCGCTCAACTGCCCCTTCGGTAGACGGAGCTGGCTAC GGAGCTCGCCAGGGATCCCTTCATCGCGTCTTTCTCATGCGCGACGTGCACACCAATGCATCGCTCAGATATGGC TTTGCTGAGTTTTGGACCCTGCCCGACGCCCTTGCCGCTCTCAAAAAGGTGCAGATGACACGATGCTTTGAGATT GGCGGCACCCCCGTCACTATTGCCTCGATTCATTTGGGCGTCTTTGTCCCAGAGGAACGCGAATTGACGCCAGCC ATTGAGGCCGTGTCATTTGTCCCGCTCTTCAATCCTTCGCTTCGGGTCCGATACCGAGATGTGGAAGTTTGTCCG AGTTGTAGCATGGTTTCCCCGAAGCCTCTTGTCGAAGACGAAGGGCCCAAGCCAGCTCAGGACGACGTCAAGGGC GACGCTCAGAAGCAGAAGAAGCGCAAGGCCGATGACAGCTTTGCAGAGTCGGCGGCGGCGGCCAAGAAACCACCC GTCATGGCTGCCCAGCTGGCCGTCTGGAAGCGCAAGCACAACGAAATCCGTGGCGACGACGAAGCGGTGCAGACT GACGCGAGTGGTGCGGAGCAGCAATCGCCCATCAAATTCTCGCTTTCTGGCGCCAAGCCTGGCGCGTCAGCAGCA AAGACCATGGCGGCTACTGGCTCGGAGCCGCAGGGCCAGCCAGCAGCCCCAAACTATGCCGACCCTGCTTATTAC ATTGACAGAGAGCGCCTCATGTGCCTGATTTGCATGATGCGGTACAAGTCATTGGGCGATGTAGCCATTCACGAA AAGTCGCGCAACCACCAGAATGCCATGCAAGACAAGGCCAAGGTGGATGCTGCCATTGCGCGCATTGTTGCGAGG CAGCAGATGGTTGAAAAGCAGAAAAACGGGTCCTGTCAGTATCGTGACCGAGCCAAAGAGCGTCGCGAGGCGCAC AACCAGCCCGTTAAGCCAATGGCAAGCTCCAAGTCGGAATCTCAGCAACAGCAAAGCTCGTCGGCCAAGAATGAA GGCGGAAAAGCCAAGGCGGGCAACGCAGACTCCAAGGGAGCGGGCATGCTGGCCAAGATGGGCTGGACGACGGGA GCTGCCCTGGGAGCTCGAGGCGAGGGTCTTGGCGCAGCCCTTGCGGCCAGTGCTTATAAAGAGGGTGTTGGCTTG GGAGCCGAGGGTGGCAAGCTGGGCGATGCAGCCGAGGTTGCCGAATCGCGCACGACTAACAGCTATGCTAGCTAC GTCAAGGCCACCAAGGAAAAGGCGCGCGAGCGCTACAACCAGCTGGGATGA
Gene	>OphauG2\|4438 ATGCGCGAGTACTACCGCGAGCGATCCCCCGCCCGAGGGATGCGACGTGACGACCACAGGCCTCCTCTGCGAGGC AGCGACGACAGCCGAGACGAGCGAGACGATGTGCATCGGTCGCGGCACGGTAAACACCTGGCCCGCGCCTTGTGT GGGATCCCGAGAAAGCCAGAGAGGGGCCCGTTCTCGTCACCTTGAGCCATGCGCTAACTTGCCAACCGGCCCCCG AGACTATTCCAGGTCTCCCTCGAGGCGCGACTACAACTGCGTCAAAAGGGAGCTGTCTGATGACGAATCTAATTA CACCGACCGTCCCCCTCGCGGTCGCTTTGAGCCCTATCGCGGCCGTCATGATGGCATGTCGCCCAGGAGATACCA TGATGCACGTCGCTCGCGCTATGACGCCTGGCACGACTCTCACCATCATGACATGTACCAAGATGCCCCTCGCCT TGGTCGTCGCTCGCGAGACCCTCACCGTCCGGACCCCCTCCTGCCAGATGGCTACATGCACCAAGACGACGCCCA ACGCTCCTCTCCTCGTAGATATGCCCCCCACGACTCAGACCCCTTGGACCACCCAATCAAGCACGAGTTTGATGG CCAACGTGCGATCAAGCACGAGTTTGATGGCCAACGTGCGATCAAGCACGAGTTTGATGGCCAACGTGCGCCTCC AACATGGTCCTCTCGCGATGGTCGCTCCAGGAGCCGCTCCAAACCCCGTTTCAGCGCTGCTGGACCCCCAAGCCG CACAGTCGTCGTCGACGGCTTGCCCTTGGGCCTGTCGGACAGAGCCGTGAGTCTTGCTTGCTCTTGCTTGCCGCC CAACCCGTCACCAAGGCTAACCCTGCAAAACCCATGGCCCAAGGCTCATGAGTGTCTCTTCCAAGCCAACTCGTT TGCTGACTCGTGTCTTGACCTTCGACTGGTGCCATCTCGAGGTAAATCTATCTTGATGCCAAATCCGTTGCTTCA TGGTGGCTAATACTACTACTACATGCCCCAAGGCTTTTGCCGCGCCTATCTGGACTTTGTAAACTGTGGCCGTGC TGTTAGCTTTGTCAGAATGCTATTTCCAACTTTTCACGTCACGGTGCCGCGCCCAGCTGGCGACGGCCCGCCCAT GGACTGCCAACTCTCTATTGGCTTTTTTCGCAAGCGCCGAAACTCGGACAGTGAAAACGCCCAAGGTGCACCCAA CACTTGCTCTTTCGACTGGCTGTGCCCCCAAGTTAGTCCACTTTTACACACCTCAATCCACGTTGGGCACGCTTT GGATCTCACTGTTTCTTGTTCCCACCCAGTGCGCTTTCAACAACTTTGCTTCGCGTGATAAGTGCAAGCAATGCG GCTGCCCAGTCCCAGGTACAGTCGCCCGCGCCACAGGGGCCGTGCAAACATGCATGCCTTGGCCTACACGCATCC AGCTAATATGTACCGCTCCGCCTTAGCCCTTTCAGCCACGCCAGCCCTTGCTCCAACTCCAGGCTCACTTGGCCG CACCGGCGCGGCTGACATTGGCCGAGATGTTGACCAAAAGGTTCAGATTCTCGTTGTCTACCCGCTGCCGCGAGA CATGGACGAGACCATGTTTGCCAACGAGATGAAGCGCCTGGAGCTGGTCAAGATGGACAAGCCCAAAGAAGGTGC TCCCAAGCTGCGCTCAACTGCCCCTTCGGTAGACGGAGCTGGCTACGGAGCTCGCCAGGGATCCCTTCATCGCGT CTTTCTCATGCGCGACGTGCACACCAATGCATCGCTCAGATATGGCTTTGCTGAGTTTTGGACCCTGCCCGACGC CCTTGCCGCTCTCAAAAAGGTGCAGATGACACGATGCTTTGAGATTGGCGGCACCCCCGTCACTATTGCCTCGAT TCATTTGGGCGTCTTTGTCCCAGAGGAACGCGAATTGACGCCAGCCATTGAGGCCGTGTCATTTGTCCCGCTCTT CAATCCTTCGCTTCGGGTCCGATACCGAGATGTGGAAGTTTGTCCGAGTTGTAGCATGGTTTCCCCGAAGCCTCT TGTCGAAGACGAAGGGCCCAAGCCAGCTCAGGACGACGTCAAGGGCGACGCTCAGAAGCAGAAGAAGCGCAAGGC CGATGACAGCTTTGCAGAGTCGGCGGCGGCGGCCAAGAAACCACCCGTCATGGCTGCCCAGCTGGCCGTCTGGAA GCGCAAGCACAACGAAATCCGTGGCGACGACGAAGCGGTGCAGACTGACGCGAGTGGTGCGGAGCAGCAATCGCC CATCAAATTCTCGCTTTCTGGCGCCAAGCCTGGCGCGTCAGCAGCAAAGACCATGGCGGCTACTGGCTCGGAGCC GCAGGGCCAGCCAGCAGCCCCAAACTATGCCGACCCTGCTTATTACATTGACAGAGAGCGCCTCATGTGCCTGAT TTGCATGATGCGGTACAAGTCATTGGGCGATGTAGCCATTCACGAAAAGTCGCGCAACCACCAGAATGCCATGCA AGACAAGGCCAAGGTGGATGCTGCCATTGCGCGCATTGTTGCGAGGCAGCAGATGGTTGAAAAGCAGAAAAACGG GTCCTGTCAGTATCGTGACCGAGCCAAAGAGCGTCGCGAGGCGCACAACCAGCCCGTTAAGCCAATGGCAAGCTC CAAGTCGGAATCTCAGCAACAGCAAAGCTCGTCGGCCAAGAATGAAGGCGGAAAAGCCAAGGCGGGCAACGCAGA CTCCAAGGGAGCGGGCATGCTGGCCAAGATGGGCTGGACGACGGGAGCTGCCCTGGGAGCTCGAGGCGAGGGTCT TGGCGCAGCCCTTGCGGCCAGTGCTTATAAAGAGGGTGTTGGCTTGGGAGCCGAGGGTGGCAAGCTGGGCGATGC AGCCGAGGTTGCCGAATCGCGCACGACTAACAGCTATGCTAGCTACGTCAAGGCCACCAAGGAAAAGGCGCGCGA GCGCTACAACCAGCTGGGATGA

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