© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4372 |
| Gene name | |
| Location | Contig_362:8405..10639 |
| Strand | + |
| Gene length (bp) | 2234 |
| Transcript length (bp) | 2055 |
| Coding sequence length (bp) | 2055 |
| Protein length (aa) | 685 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00520 | Ion_trans | Ion transport protein | 1.4E-07 | 289 | 505 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5A2J7|YVC1_CANAL | Calcium channel YVC1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YVC1 PE=2 SV=1 | 217 | 595 | 9.0E-19 |
| sp|Q12324|YVC1_YEAST | Calcium channel YVC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YVC1 PE=1 SV=2 | 217 | 672 | 2.0E-14 |
| sp|Q91YD4|TRPM2_MOUSE | Transient receptor potential cation channel subfamily M member 2 OS=Mus musculus GN=Trpm2 PE=2 SV=1 | 211 | 452 | 3.0E-07 |
| sp|Q8R455|TRPM8_RAT | Transient receptor potential cation channel subfamily M member 8 OS=Rattus norvegicus GN=Trpm8 PE=1 SV=4 | 213 | 413 | 2.0E-06 |
| sp|Q8R4D5|TRPM8_MOUSE | Transient receptor potential cation channel subfamily M member 8 OS=Mus musculus GN=Trpm8 PE=1 SV=3 | 213 | 413 | 2.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5A2J7|YVC1_CANAL | Calcium channel YVC1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YVC1 PE=2 SV=1 | 217 | 595 | 9.0E-19 |
| sp|Q12324|YVC1_YEAST | Calcium channel YVC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YVC1 PE=1 SV=2 | 217 | 672 | 2.0E-14 |
| sp|Q91YD4|TRPM2_MOUSE | Transient receptor potential cation channel subfamily M member 2 OS=Mus musculus GN=Trpm2 PE=2 SV=1 | 211 | 452 | 3.0E-07 |
| sp|Q8R455|TRPM8_RAT | Transient receptor potential cation channel subfamily M member 8 OS=Rattus norvegicus GN=Trpm8 PE=1 SV=4 | 213 | 413 | 2.0E-06 |
| sp|Q8R4D5|TRPM8_MOUSE | Transient receptor potential cation channel subfamily M member 8 OS=Mus musculus GN=Trpm8 PE=1 SV=3 | 213 | 413 | 2.0E-06 |
| sp|Q9QX29|TRPC5_MOUSE | Short transient receptor potential channel 5 OS=Mus musculus GN=Trpc5 PE=1 SV=2 | 207 | 540 | 3.0E-06 |
| sp|O62852|TRPC5_RABIT | Short transient receptor potential channel 5 OS=Oryctolagus cuniculus GN=TRPC5 PE=2 SV=1 | 207 | 540 | 4.0E-06 |
| sp|Q9UL62|TRPC5_HUMAN | Short transient receptor potential channel 5 OS=Homo sapiens GN=TRPC5 PE=1 SV=1 | 207 | 540 | 5.0E-06 |
| sp|Q7Z2W7|TRPM8_HUMAN | Transient receptor potential cation channel subfamily M member 8 OS=Homo sapiens GN=TRPM8 PE=1 SV=2 | 213 | 413 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0006811 | ion transport | Yes |
| GO:0005216 | ion channel activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0015267 | channel activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 285 | 303 | 18 |
| 2 | 310 | 329 | 19 |
| 3 | 344 | 366 | 22 |
| 4 | 417 | 439 | 22 |
| 5 | 444 | 466 | 22 |
| 6 | 473 | 495 | 22 |
| 7 | 530 | 552 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4372 MPIRLRVGARTAARDQSPLNSHMELDLPEIGDDDSFRQVARKLSRYLAQAIELPSTFEQLRTTAAGNCLRVLVDH LNATCTNPSIVHGLLALKWHYDADSEHMGLSETRSSACEIVAWRFLVRLSEREAMNFCLYEIPAANHAPQPSSSD AEQGFNTTASSPLLPRLLPTFQDNPDALQLANTPMRVKMVTSLARLANTSEESPDAEADPTAAFRGLNALEIAAV ANAKRFLSQNVVQKIISAIWNGDIVFWDSLSVHSSKRHRFYNPEASDPFSRLRVPKYVKIWEVLFFAVFLCLYYA VLLVRDEHHITLTEILLYIWLAAFFYDELSEWMDAGSVFYAADIWNIFDMSMIVIGLTFAVLRVIGIAHQDKRIN DLAFDVLALEALFMMPRICSILSLSPYWGTLIPCLKEMGKDFLKFMVLVVIIYFGFLTTFSLIGRDTFSFYNMTG ILTKIFFGSSYVGFEIMNQIDPIFGPPLMIIFITLTSILLTGSMTGMLSNSFSRVIIHAREEYLYIYSVFVLEAS TSNRLTHFYPPFNLLALIIFRPLRLVFRRDEKFRAGRIALLKVTHLPIVAAIQFYELVRRKVHADKYAGLRGTGE AYVRGPRPQAATPSRPSSSYDRQLWPPPRDSGLIGSRSKGDDDVVDAPTSVEVQIAELNRKIDRLTNVVMSLRDG GKHTGYGSP* |
| Coding | >OphauG2|4372 ATGCCCATCCGCCTCAGGGTGGGCGCCCGCACGGCAGCGCGCGACCAGAGCCCCCTCAACTCCCACATGGAGCTT GATCTGCCCGAGATTGGAGACGACGATTCCTTTCGCCAGGTGGCCCGCAAGCTGTCGCGCTACTTGGCCCAGGCC ATCGAGCTGCCCAGCACCTTTGAGCAGCTGCGCACCACGGCGGCGGGAAACTGCCTGCGCGTCTTGGTGGACCAT CTCAATGCCACGTGCACGAATCCCTCCATTGTCCATGGCTTGCTCGCCCTCAAGTGGCACTACGATGCCGACTCG GAGCACATGGGCCTCAGCGAGACTCGCTCAAGCGCCTGCGAGATTGTCGCCTGGCGCTTCCTCGTCCGCCTATCC GAGCGCGAGGCCATGAATTTCTGTCTCTACGAGATTCCTGCCGCAAACCACGCCCCTCAGCCCAGCTCGAGCGAT GCCGAACAAGGTTTCAATACAACAGCCTCTTCACCACTACTGCCTCGTCTGCTACCCACTTTCCAAGACAATCCA GACGCCCTACAACTAGCAAACACTCCCATGAGAGTAAAGATGGTGACCTCACTCGCCCGTTTGGCAAACACCTCG GAAGAATCGCCCGACGCCGAGGCAGATCCTACCGCCGCCTTTAGAGGTCTCAATGCGCTTGAGATTGCGGCAGTG GCCAACGCCAAGCGCTTTCTCAGCCAGAATGTCGTACAGAAAATCATCAGCGCCATATGGAATGGCGACATTGTC TTTTGGGACAGTCTTTCAGTGCACTCGTCCAAGAGGCATCGCTTCTATAACCCAGAAGCATCGGACCCATTTTCA CGACTTCGCGTGCCCAAGTATGTCAAGATTTGGGAGGTGCTCTTCTTTGCAGTCTTTCTCTGCCTCTACTATGCC GTCTTGCTCGTCCGTGATGAACATCACATCACCCTTACCGAAATCCTTCTCTACATTTGGCTCGCCGCCTTCTTT TACGATGAGCTGAGCGAGTGGATGGATGCTGGTTCCGTTTTCTATGCTGCAGATATTTGGAACATCTTCGACATG AGCATGATTGTCATTGGCCTCACGTTTGCTGTCTTGAGAGTAATTGGCATCGCTCATCAAGACAAGCGCATCAAC GACTTGGCATTCGACGTGCTTGCTCTCGAGGCCCTCTTCATGATGCCGCGCATCTGTTCCATACTCAGCCTGAGC CCGTACTGGGGCACGCTTATTCCTTGTCTTAAGGAGATGGGCAAAGACTTTCTCAAGTTCATGGTGCTCGTCGTC ATTATATATTTTGGCTTCCTCACCACCTTCTCGCTCATTGGTCGTGACACGTTTAGCTTCTACAACATGACGGGC ATCCTGACCAAAATCTTTTTCGGTTCGAGCTATGTCGGCTTCGAAATCATGAATCAGATTGATCCCATCTTTGGG CCCCCGCTAATGATAATCTTCATCACCTTGACATCGATACTTCTCACTGGGTCCATGACTGGTATGCTGTCCAAC AGCTTCTCGCGCGTAATAATTCACGCAAGAGAGGAATACCTCTACATTTACAGCGTCTTTGTGCTCGAGGCATCA ACCAGTAATAGGCTCACTCACTTTTATCCACCCTTTAACCTCTTGGCCCTCATCATCTTCCGGCCTCTACGACTG GTATTCCGGCGTGACGAAAAGTTTCGCGCCGGTCGCATCGCCTTGCTCAAGGTGACGCATCTGCCAATTGTGGCA GCAATCCAGTTTTATGAGCTCGTTCGGCGAAAAGTTCACGCCGACAAATATGCCGGCCTGCGAGGCACGGGAGAG GCGTATGTTAGAGGTCCGAGGCCACAAGCAGCGACGCCATCGAGACCTTCATCAAGCTATGACCGACAGCTGTGG CCGCCGCCGCGGGATTCGGGCCTGATTGGAAGCCGTAGCAAGGGTGACGATGATGTTGTGGATGCGCCTACATCT GTTGAGGTACAGATTGCCGAGTTGAATCGCAAGATTGATCGACTCACCAATGTTGTCATGTCACTGCGGGATGGT GGCAAGCACACCGGGTACGGTTCACCGTAG |
| Transcript | >OphauG2|4372 ATGCCCATCCGCCTCAGGGTGGGCGCCCGCACGGCAGCGCGCGACCAGAGCCCCCTCAACTCCCACATGGAGCTT GATCTGCCCGAGATTGGAGACGACGATTCCTTTCGCCAGGTGGCCCGCAAGCTGTCGCGCTACTTGGCCCAGGCC ATCGAGCTGCCCAGCACCTTTGAGCAGCTGCGCACCACGGCGGCGGGAAACTGCCTGCGCGTCTTGGTGGACCAT CTCAATGCCACGTGCACGAATCCCTCCATTGTCCATGGCTTGCTCGCCCTCAAGTGGCACTACGATGCCGACTCG GAGCACATGGGCCTCAGCGAGACTCGCTCAAGCGCCTGCGAGATTGTCGCCTGGCGCTTCCTCGTCCGCCTATCC GAGCGCGAGGCCATGAATTTCTGTCTCTACGAGATTCCTGCCGCAAACCACGCCCCTCAGCCCAGCTCGAGCGAT GCCGAACAAGGTTTCAATACAACAGCCTCTTCACCACTACTGCCTCGTCTGCTACCCACTTTCCAAGACAATCCA GACGCCCTACAACTAGCAAACACTCCCATGAGAGTAAAGATGGTGACCTCACTCGCCCGTTTGGCAAACACCTCG GAAGAATCGCCCGACGCCGAGGCAGATCCTACCGCCGCCTTTAGAGGTCTCAATGCGCTTGAGATTGCGGCAGTG GCCAACGCCAAGCGCTTTCTCAGCCAGAATGTCGTACAGAAAATCATCAGCGCCATATGGAATGGCGACATTGTC TTTTGGGACAGTCTTTCAGTGCACTCGTCCAAGAGGCATCGCTTCTATAACCCAGAAGCATCGGACCCATTTTCA CGACTTCGCGTGCCCAAGTATGTCAAGATTTGGGAGGTGCTCTTCTTTGCAGTCTTTCTCTGCCTCTACTATGCC GTCTTGCTCGTCCGTGATGAACATCACATCACCCTTACCGAAATCCTTCTCTACATTTGGCTCGCCGCCTTCTTT TACGATGAGCTGAGCGAGTGGATGGATGCTGGTTCCGTTTTCTATGCTGCAGATATTTGGAACATCTTCGACATG AGCATGATTGTCATTGGCCTCACGTTTGCTGTCTTGAGAGTAATTGGCATCGCTCATCAAGACAAGCGCATCAAC GACTTGGCATTCGACGTGCTTGCTCTCGAGGCCCTCTTCATGATGCCGCGCATCTGTTCCATACTCAGCCTGAGC CCGTACTGGGGCACGCTTATTCCTTGTCTTAAGGAGATGGGCAAAGACTTTCTCAAGTTCATGGTGCTCGTCGTC ATTATATATTTTGGCTTCCTCACCACCTTCTCGCTCATTGGTCGTGACACGTTTAGCTTCTACAACATGACGGGC ATCCTGACCAAAATCTTTTTCGGTTCGAGCTATGTCGGCTTCGAAATCATGAATCAGATTGATCCCATCTTTGGG CCCCCGCTAATGATAATCTTCATCACCTTGACATCGATACTTCTCACTGGGTCCATGACTGGTATGCTGTCCAAC AGCTTCTCGCGCGTAATAATTCACGCAAGAGAGGAATACCTCTACATTTACAGCGTCTTTGTGCTCGAGGCATCA ACCAGTAATAGGCTCACTCACTTTTATCCACCCTTTAACCTCTTGGCCCTCATCATCTTCCGGCCTCTACGACTG GTATTCCGGCGTGACGAAAAGTTTCGCGCCGGTCGCATCGCCTTGCTCAAGGTGACGCATCTGCCAATTGTGGCA GCAATCCAGTTTTATGAGCTCGTTCGGCGAAAAGTTCACGCCGACAAATATGCCGGCCTGCGAGGCACGGGAGAG GCGTATGTTAGAGGTCCGAGGCCACAAGCAGCGACGCCATCGAGACCTTCATCAAGCTATGACCGACAGCTGTGG CCGCCGCCGCGGGATTCGGGCCTGATTGGAAGCCGTAGCAAGGGTGACGATGATGTTGTGGATGCGCCTACATCT GTTGAGGTACAGATTGCCGAGTTGAATCGCAAGATTGATCGACTCACCAATGTTGTCATGTCACTGCGGGATGGT GGCAAGCACACCGGGTACGGTTCACCGTAG |
| Gene | >OphauG2|4372 ATGCCCATCCGCCTCAGGGTGGGCGCCCGCACGGCAGCGCGCGACCAGAGCCCCCTCAACTCCCACATGGAGCTT GATCTGCCCGAGATTGGAGACGACGATTCCTTTCGCCAGGTGGCCCGCAAGCTGTCGCGGTGCGTTGCCCCTACT GGCAGCCTTTGCGCTGGACAGTGGCTGACCTCGTTTGCCGCTGCAGCTACTTGGCCCAGGCCATCGAGCTGCCCA GCACCTTTGAGCAGCTGCGCACCACGGCGGCGGGAAACTGCCTGCGCGTCTTGGTGGACCATCTCAATGCCACGT GCACGAATCCCTCCATTGTCCATGGCTTGCTGTACGTCTGTCATTGCTGTTTGGTCACGCTGAACCAAGTCTCGT CTCACGCCCGTCAGCGCCCTCAAGTGGCACTACGATGCCGACTCGGAGCACATGGGCCTCAGCGAGACTCGCTCA AGCGCCTGCGAGATTGTCGCCTGGCGCTTCCTCGTCCGCCTATCCGAGCGCGAGGCCATGAATTTCTGTCTCTAC GAGATTCCTGCCGCAAACCACGCCCCTCAGCCCAGCTCGAGCGATGCCGAACAAGGTTTCAATACAACAGCCTCT TCACCACTACTGCCTCGTCTGCTACCCACTTTCCAAGACAATCCAGACGCCCTACAACTAGCAAACACTCCCATG AGAGTAAAGATGGTGACCTCACTCGCCCGTTTGGCAAACACCTCGGAAGAATCGCCCGACGCCGAGGCAGATCCT ACCGCCGCCTTTAGAGGTCTCAATGCGCTTGAGATTGCGGCAGTGGCCAACGCCAAGCGCTTTCTCAGCCAGAAT GTCGTACAGAAAATCATCAGCGCCATATGGAATGGCGACATTGTCTTTTGGGACAGTCTTTCAGTGCACTCGTCC AAGAGGCATCGCTTCTATAACCCAGAAGCATCGGACCCATTTTCACGACTTCGCGTGCCCAAGTATGTCAAGATT TGGGAGGTGCTCTTCTTTGCAGTCTTTCTCTGCCTCTACTATGCCGTCTTGCTCGTCCGTGATGAACATCACATC ACCCTTACCGAAATCCTTCTCTACATTTGGCTCGCCGCCTTCTTTTACGATGAGCTGAGCGAGTGGATGGATGCT GGTTCCGTTTTCTATGCTGCAGATATTTGGAACATCTTCGACATGAGCATGATTGTCATTGGCCTCACGTTTGCT GTCTTGAGTTAGTTTGCTCACTCCCTTGCTCGAGGTTGTTTTGCTAACACTGTGCCCCAATCCAAGGAGTAATTG GCATCGCTCATCAAGACAAGCGCATCAACGACTTGGCATTCGACGTGCTTGCTCTCGAGGCCCTCTTCATGATGC CGCGCATCTGTTCCATACTCAGCCTGAGCCCGTACTGGGGCACGCTTATTCCTTGTCTTAAGGAGATGGGCAAAG ACTTTCTCAAGTTCATGGTGCTCGTCGTCATTATATATTTTGGCTTCCTCACCACCTTCTCGCTCATTGGTCGTG ACACGTTTAGCTTCTACAACATGACGGGCATCCTGACCAAAATCTTTTTCGGTTCGAGCTATGTCGGCTTCGAAA TCATGAATCAGATTGATCCCATCTTTGGGCCCCCGCTAATGATAATCTTCATCACCTTGACATCGATACTTCTCA CTGGGTCCATGACTGGTATGCTGTCCAACAGCTTCTCGCGCGTAATAATTCACGCAAGAGAGGAATACCTCTACA TTTACAGCGTCTTTGTGCTCGAGGCATCAACCAGTAATAGGCTCACTCACTTTTATCCACCCTTTAACCTCTTGG CCCTCATCATCTTCCGGCCTCTACGACTGGTATTCCGGCGTGACGAAAAGTTTCGCGCCGGTCGCATCGCCTTGC TCAAGGTGACGCATCTGCCAATTGTGGCAGCAATCCAGTTTTATGAGCTCGTTCGGCGAAAAGTTCACGCCGACA AATATGCCGGCCTGCGAGGCACGGGAGAGGCGTATGTTAGAGGTCCGAGGCCACAAGCAGCGACGCCATCGAGAC CTTCATCAAGCTATGACCGACAGCTGTGGCCGCCGCCGCGGGATTCGGGCCTGATTGGAAGCCGTAGCAAGGGTG ACGATGATGTTGTGGATGCGCCTACATCTGTTGAGGTACAGATTGCCGAGTTGAATCGCAAGATTGATCGACTCA CCAATGTTGTCATGTCACTGCGGGATGGTGGCAAGCACACCGGGTACGGTTCACCGTAG |