Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4368
Gene name
LocationContig_361:16579..17199
Strand-
Gene length (bp)620
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00775 Dioxygenase_C Dioxygenase 8.5E-39 1 150

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P86029|HQD2_CANAL Catechol 1,2-dioxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HQD2 PE=1 SV=1 1 150 1.0E-31
sp|P31019|PHEB_PSEUE Catechol 1,2-dioxygenase OS=Pseudomonas sp. (strain EST1001) GN=pheB PE=3 SV=1 1 151 1.0E-22
sp|P95607|CATA_RHOOP Catechol 1,2-dioxygenase (Fragment) OS=Rhodococcus opacus GN=catA PE=1 SV=1 1 151 2.0E-21
sp|O67987|CLCA_RHOOP Chlorocatechol 1,2-dioxygenase OS=Rhodococcus opacus GN=clcA PE=1 SV=1 3 152 3.0E-21
sp|O33948|CATA1_ACILW Catechol 1,2-dioxygenase 1 OS=Acinetobacter lwoffii GN=catA1 PE=1 SV=3 1 150 1.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|P86029|HQD2_CANAL Catechol 1,2-dioxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HQD2 PE=1 SV=1 1 150 1.0E-31
sp|P31019|PHEB_PSEUE Catechol 1,2-dioxygenase OS=Pseudomonas sp. (strain EST1001) GN=pheB PE=3 SV=1 1 151 1.0E-22
sp|P95607|CATA_RHOOP Catechol 1,2-dioxygenase (Fragment) OS=Rhodococcus opacus GN=catA PE=1 SV=1 1 151 2.0E-21
sp|O67987|CLCA_RHOOP Chlorocatechol 1,2-dioxygenase OS=Rhodococcus opacus GN=clcA PE=1 SV=1 3 152 3.0E-21
sp|O33948|CATA1_ACILW Catechol 1,2-dioxygenase 1 OS=Acinetobacter lwoffii GN=catA1 PE=1 SV=3 1 150 1.0E-20
sp|P07773|CATA_ACIAD Catechol 1,2-dioxygenase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catA PE=1 SV=1 1 129 5.0E-20
sp|P27098|TCBC_PSESQ Chlorocatechol 1,2-dioxygenase OS=Pseudomonas sp. (strain P51) GN=tcbC PE=3 SV=1 13 147 8.0E-20
sp|O33950|CATA2_ACILW Catechol 1,2-dioxygenase 2 OS=Acinetobacter lwoffii GN=catA2 PE=1 SV=1 12 127 6.0E-19
sp|Q43984|CATA_ACIGI Catechol 1,2-dioxygenase OS=Acinetobacter guillouiae GN=catA PE=2 SV=1 1 138 6.0E-19
sp|Q6F4M7|NPCC_RHOOP Hydroxyquinol 1,2-dioxygenase OS=Rhodococcus opacus GN=npcC PE=2 SV=1 1 130 4.0E-18
sp|Q5PXQ6|CHQB_NOCSI Hydroxyquinol 1,2-dioxygenase OS=Nocardioides simplex GN=chqB PE=1 SV=1 1 131 4.0E-17
sp|P0A396|TFDC_CUPPJ Chlorocatechol 1,2-dioxygenase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=tfdC PE=3 SV=1 1 127 2.0E-15
sp|P0A397|TFDC_BURCE Chlorocatechol 1,2-dioxygenase OS=Burkholderia cepacia GN=tfdC PE=3 SV=1 1 127 2.0E-15
sp|P11451|CLCA_PSEPU Chlorocatechol 1,2-dioxygenase OS=Pseudomonas putida GN=clcA PE=1 SV=1 10 127 2.0E-13
sp|P15110|PCXB_BURCE Protocatechuate 3,4-dioxygenase beta chain OS=Burkholderia cepacia GN=pcaH PE=3 SV=1 12 149 1.0E-08
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GO

GO Term Description Terminal node
GO:0006725 cellular aromatic compound metabolic process Yes
GO:0008199 ferric iron binding Yes
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No
GO:0046914 transition metal ion binding No
GO:0046872 metal ion binding No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0044237 cellular metabolic process No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0008150 biological_process No
GO:0005506 iron ion binding No
GO:0009987 cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4368
MHGTITDLVTRKPIPGVVFDLWQASANGKYDFQDPHHQSPNNLRGKFCTDAGGRYSLYCYYPTAYSLPVDGPSHA
LLEIMHRHPMRPAHIHIKVTHPDYRGCTTQLYPKDDPWLATDTVFAVKHDLVVDFKPLKDDPKAELDLEFNVVLT
PNNYKSPHTNGHATP*
Coding >OphauG2|4368
ATGCACGGCACAATCACCGACCTCGTCACCCGCAAGCCCATCCCCGGCGTCGTCTTTGATCTGTGGCAGGCCAGC
GCCAACGGCAAATACGATTTCCAGGACCCGCATCACCAGTCGCCCAACAACCTCCGCGGCAAGTTTTGCACCGAT
GCCGGGGGCAGATATTCCCTCTACTGCTACTATCCCACTGCCTACTCGCTGCCCGTCGACGGGCCGAGCCATGCG
CTTCTTGAAATCATGCATCGCCATCCCATGCGCCCTGCTCATATCCACATCAAGGTAACACATCCCGACTACCGC
GGCTGCACAACCCAGCTCTACCCCAAAGACGATCCATGGCTAGCCACAGACACCGTCTTTGCCGTCAAGCATGAC
CTAGTCGTCGACTTTAAGCCGCTAAAAGACGACCCCAAGGCCGAGCTGGACCTCGAGTTCAACGTCGTCCTCACC
CCCAACAACTACAAGAGCCCACACACCAACGGACATGCCACTCCCTGA
Transcript >OphauG2|4368
ATGCACGGCACAATCACCGACCTCGTCACCCGCAAGCCCATCCCCGGCGTCGTCTTTGATCTGTGGCAGGCCAGC
GCCAACGGCAAATACGATTTCCAGGACCCGCATCACCAGTCGCCCAACAACCTCCGCGGCAAGTTTTGCACCGAT
GCCGGGGGCAGATATTCCCTCTACTGCTACTATCCCACTGCCTACTCGCTGCCCGTCGACGGGCCGAGCCATGCG
CTTCTTGAAATCATGCATCGCCATCCCATGCGCCCTGCTCATATCCACATCAAGGTAACACATCCCGACTACCGC
GGCTGCACAACCCAGCTCTACCCCAAAGACGATCCATGGCTAGCCACAGACACCGTCTTTGCCGTCAAGCATGAC
CTAGTCGTCGACTTTAAGCCGCTAAAAGACGACCCCAAGGCCGAGCTGGACCTCGAGTTCAACGTCGTCCTCACC
CCCAACAACTACAAGAGCCCACACACCAACGGACATGCCACTCCCTGA
Gene >OphauG2|4368
ATGCACGGCACAATCACCGACCTCGTCACCCGCAAGCCCATCCCCGGCGTCGTCTTTGATCTGTGGCAGGCCAGC
GCCAACGGCAAATACGATTTCCAGGACCCGCATCACCAGTCGCCCAACAACCTCCGCGGCAAGTTTTGCACCGAT
GCCGGGGGCAGATATTCCCTCTACTGCTACTATCCCACTGCCTACTCGCTGCCCGTCGACGGGCCGAGCCATGCG
CTTCTTGAAATCATGCATCGCCATCCCATGCGCCCTGCTCATATCCACATCAAGGTTAGCCATTTACCTCTTTAC
CTCTTTTTCTTTTTTTCTTTTCTTCTTCGCGTCTTGCTCCTGTGTGCAAAAAACCGTCAACGCCAATATAAAAAA
AATCAACTCGACTAAACACCATCTAGGTAACACATCCCGACTACCGCGGCTGCACAACCCAGCTCTACCCCAAAG
ACGATCCATGGCTAGCCACAGACACCGTCTTTGCCGTCAAGCATGACCTAGTCGTCGACTTTAAGCCGCTAAAAG
ACGACCCCAAGGCCGAGCTGGACCTCGAGTTCAACGTCGTCCTCACCCCCAACAACTACAAGAGCCCACACACCA
ACGGACATGCCACTCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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