Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4325
Gene name
Location	Contig_357:10705..12541
Strand	-
Gene length (bp)	1836
Transcript length (bp)	1659
Coding sequence length (bp)	1659
Protein length (aa)	553

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10281	Ish1	Putative nuclear envelope organisation protein	6.4E-13	132	165
PF10281	Ish1	Putative nuclear envelope organisation protein	3.6E-12	188	221
PF10281	Ish1	Putative nuclear envelope organisation protein	1.3E-10	336	369
PF10281	Ish1	Putative nuclear envelope organisation protein	4.6E-12	454	488

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q03104\|MSC1_YEAST	Meiotic sister chromatid recombination protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC1 PE=1 SV=1	126	497	7.0E-25
sp\|Q9Y7X6\|ISH1_SCHPO	Stress response protein ish1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ish1 PE=1 SV=1	9	489	2.0E-22
sp\|O94559\|YF65_SCHPO	Uncharacterized protein C23C4.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C4.05c PE=3 SV=1	132	477	5.0E-12
sp\|O94559\|YF65_SCHPO	Uncharacterized protein C23C4.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C4.05c PE=3 SV=1	73	279	4.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4325 MRQFTTLLAAGLAASGALASSWFPGTKAVYNKWHETELERWLDDHDIPHSTPAERHDLEVLIEKNWNDAVVEPYS KWDADRLSKYLQTKGAEVGQGAEETKESLLAKVKANWLETGDNASQAWANVKDWILDTWTDSQLKAFCDKHGIPV PQPRQRDTLLQKARSGYESAAKKLGESAAYPGDWLYASWSDSDFKSWLDANGIPAPQPTTRDKLVASVRRNSRLA YLQAQQQAAKARANAQAVYATVSDKVIDAWGESELKDFCDKNSIPVPQGTRVNELRALVRKHRAEIMDDTVGAKA SLAFGAATSNAQNEYAKATDSASLAAQDAFDRATEAWSDSRLKSYLDARGIPVPHSSTTDELRALVRKNVHKITT GGSAWTYDDLSREKLQQYLAQQGDAAAKTLAEKKDATREELVSAAQSAYSSASTAGGEAYASATSYLAEATAAAK NSAFDTWTETDLKAYLDSYGVPVPQGSKLEELKALARKQSTYFKYGTSSPSETLFAKLEETARGGWNWIAHQLNL GGEAAREKAAEAEAQAKAKAEQLREEL*
Coding	>OphauG2\|4325 ATGAGGCAGTTCACGACCCTGCTGGCGGCCGGCCTGGCTGCCTCGGGTGCTCTTGCCAGTAGCTGGTTCCCTGGT ACAAAAGCTGTCTATAACAAGTGGCATGAGACGGAACTTGAGCGTTGGTTGGACGACCACGACATTCCGCACTCC ACCCCGGCTGAGCGTCATGACCTTGAGGTCTTGATTGAGAAGAATTGGAACGATGCTGTCGTTGAGCCTTACTCA AAATGGGATGCGGATCGCCTGAGCAAGTACCTGCAGACCAAGGGCGCCGAGGTTGGCCAAGGTGCCGAGGAGACC AAGGAGAGTCTCCTCGCAAAGGTCAAGGCCAATTGGTTGGAGACTGGGGACAACGCTTCTCAGGCCTGGGCAAAC GTCAAGGATTGGATTCTCGACACGTGGACCGACAGCCAGCTCAAGGCGTTTTGCGATAAACACGGCATCCCTGTC CCTCAGCCGCGCCAACGCGATACGCTGCTTCAGAAGGCTCGCTCTGGCTACGAATCGGCTGCCAAAAAGCTGGGC GAGTCTGCCGCCTATCCTGGCGACTGGCTCTATGCCTCATGGTCGGATTCTGACTTCAAGTCGTGGCTCGATGCC AATGGTATTCCAGCTCCCCAGCCCACCACACGTGACAAGCTTGTAGCTTCGGTGCGCCGAAATTCGCGTCTTGCC TACCTCCAGGCCCAACAGCAAGCCGCTAAAGCTAGGGCCAACGCCCAGGCCGTCTATGCTACTGTTTCTGACAAG GTCATTGACGCCTGGGGCGAGTCGGAACTCAAGGACTTCTGTGACAAGAATTCTATTCCCGTTCCTCAGGGTACC CGAGTCAATGAGCTTCGGGCCTTGGTGCGCAAGCATCGAGCCGAAATCATGGATGACACTGTTGGTGCCAAGGCT TCTTTAGCGTTTGGTGCTGCGACTTCGAATGCTCAAAATGAGTACGCAAAGGCTACCGACAGTGCTTCATTGGCT GCCCAGGATGCTTTTGATCGTGCCACTGAGGCCTGGTCTGACAGCCGGCTCAAGTCATATCTCGATGCTCGGGGC ATTCCTGTCCCACACTCGTCGACGACAGATGAGCTTCGGGCGCTGGTCCGAAAGAATGTGCACAAGATTACGACG GGTGGCAGTGCATGGACCTATGATGACTTGTCTCGCGAGAAGCTGCAGCAGTACCTTGCCCAGCAAGGCGACGCT GCTGCCAAGACGCTTGCTGAGAAGAAAGACGCTACTCGTGAGGAGCTCGTCAGTGCTGCACAATCGGCGTATTCA TCAGCATCGACGGCAGGCGGCGAGGCTTATGCCTCGGCAACCAGTTACCTGGCCGAGGCCACGGCGGCCGCCAAG AACAGCGCTTTCGACACTTGGACCGAGACCGATCTCAAGGCTTACCTTGATAGCTATGGCGTCCCCGTTCCGCAG GGCTCCAAGCTTGAGGAGCTCAAAGCCCTAGCTCGCAAGCAGTCGACATACTTCAAATACGGTACCTCATCGCCT AGCGAGACTCTGTTTGCTAAGCTCGAAGAGACTGCCAGGGGAGGATGGAACTGGATCGCTCATCAGCTCAACCTG GGTGGTGAGGCTGCCCGCGAGAAGGCGGCCGAAGCTGAGGCTCAAGCAAAGGCCAAGGCGGAGCAACTCAGGGAG GAGCTTTGA
Transcript	>OphauG2\|4325 ATGAGGCAGTTCACGACCCTGCTGGCGGCCGGCCTGGCTGCCTCGGGTGCTCTTGCCAGTAGCTGGTTCCCTGGT ACAAAAGCTGTCTATAACAAGTGGCATGAGACGGAACTTGAGCGTTGGTTGGACGACCACGACATTCCGCACTCC ACCCCGGCTGAGCGTCATGACCTTGAGGTCTTGATTGAGAAGAATTGGAACGATGCTGTCGTTGAGCCTTACTCA AAATGGGATGCGGATCGCCTGAGCAAGTACCTGCAGACCAAGGGCGCCGAGGTTGGCCAAGGTGCCGAGGAGACC AAGGAGAGTCTCCTCGCAAAGGTCAAGGCCAATTGGTTGGAGACTGGGGACAACGCTTCTCAGGCCTGGGCAAAC GTCAAGGATTGGATTCTCGACACGTGGACCGACAGCCAGCTCAAGGCGTTTTGCGATAAACACGGCATCCCTGTC CCTCAGCCGCGCCAACGCGATACGCTGCTTCAGAAGGCTCGCTCTGGCTACGAATCGGCTGCCAAAAAGCTGGGC GAGTCTGCCGCCTATCCTGGCGACTGGCTCTATGCCTCATGGTCGGATTCTGACTTCAAGTCGTGGCTCGATGCC AATGGTATTCCAGCTCCCCAGCCCACCACACGTGACAAGCTTGTAGCTTCGGTGCGCCGAAATTCGCGTCTTGCC TACCTCCAGGCCCAACAGCAAGCCGCTAAAGCTAGGGCCAACGCCCAGGCCGTCTATGCTACTGTTTCTGACAAG GTCATTGACGCCTGGGGCGAGTCGGAACTCAAGGACTTCTGTGACAAGAATTCTATTCCCGTTCCTCAGGGTACC CGAGTCAATGAGCTTCGGGCCTTGGTGCGCAAGCATCGAGCCGAAATCATGGATGACACTGTTGGTGCCAAGGCT TCTTTAGCGTTTGGTGCTGCGACTTCGAATGCTCAAAATGAGTACGCAAAGGCTACCGACAGTGCTTCATTGGCT GCCCAGGATGCTTTTGATCGTGCCACTGAGGCCTGGTCTGACAGCCGGCTCAAGTCATATCTCGATGCTCGGGGC ATTCCTGTCCCACACTCGTCGACGACAGATGAGCTTCGGGCGCTGGTCCGAAAGAATGTGCACAAGATTACGACG GGTGGCAGTGCATGGACCTATGATGACTTGTCTCGCGAGAAGCTGCAGCAGTACCTTGCCCAGCAAGGCGACGCT GCTGCCAAGACGCTTGCTGAGAAGAAAGACGCTACTCGTGAGGAGCTCGTCAGTGCTGCACAATCGGCGTATTCA TCAGCATCGACGGCAGGCGGCGAGGCTTATGCCTCGGCAACCAGTTACCTGGCCGAGGCCACGGCGGCCGCCAAG AACAGCGCTTTCGACACTTGGACCGAGACCGATCTCAAGGCTTACCTTGATAGCTATGGCGTCCCCGTTCCGCAG GGCTCCAAGCTTGAGGAGCTCAAAGCCCTAGCTCGCAAGCAGTCGACATACTTCAAATACGGTACCTCATCGCCT AGCGAGACTCTGTTTGCTAAGCTCGAAGAGACTGCCAGGGGAGGATGGAACTGGATCGCTCATCAGCTCAACCTG GGTGGTGAGGCTGCCCGCGAGAAGGCGGCCGAAGCTGAGGCTCAAGCAAAGGCCAAGGCGGAGCAACTCAGGGAG GAGCTTTGA
Gene	>OphauG2\|4325 ATGAGGCAGTTCACGACCCTGCTGGCGGCCGGCCTGGCTGCCTCGGGTGCTCTTGCCAGTAGCTGGTTCCCTGGT ACAAAAGCTGGTACGTGGCCCACGCGCCTCGTGTTTCAAAGCCCTGATCACACGTATGCGCACTGCATCGCTTTG CTCACGCTTTTGCAGTCTATAACAAGTGGCATGAGACGGAACTTGAGCGTTGGTTGGACGACCACGACATTCCGC ACTCCACCCCGGCTGAGCGTCATGACCTTGAGGTCTTGATTGAGAAGAATTGGAACGATGCTGTCGTTGAGCCTT ACTCAAAATGGGATGCGGATCGCCTGAGCAAGTACCTGCAGACCAAGGGCGCCGAGGTTGGCCAAGGTGCCGAGG AGACCAAGGAGAGTCTCCTCGCAAAGGTCAAGGCCAATTGGTTGGAGACTGGGGACAACGCTTCTCAGGCCTGGG CAAACGTCAAGGATTGGATTCTCGACACGTGGACCGACAGCCAGCTCAAGGCGTTTTGCGATAAACACGGCATCC CTGGTGCGTACTTCGCGTCTCTCCCCCCTCCTACTTGGGAGCATTGTGCACCTGATGCTCCCCACGGGCCTTCAC TGAGTGCTGACCAATCTCCTTGCAGTCCCTCAGCCGCGCCAACGCGATACGCTGCTTCAGAAGGCTCGCTCTGGC TACGAATCGGCTGCCAAAAAGCTGGGCGAGTCTGCCGCCTATCCTGGCGACTGGCTCTATGCCTCATGGTCGGAT TCTGACTTCAAGTCGTGGCTCGATGCCAATGGTATTCCAGCTCCCCAGCCCACCACACGTGACAAGCTTGTAGCT TCGGTGCGCCGAAATTCGCGTCTTGCCTACCTCCAGGCCCAACAGCAAGCCGCTAAAGCTAGGGCCAACGCCCAG GCCGTCTATGCTACTGTTTCTGACAAGGTCATTGACGCCTGGGGCGAGTCGGAACTCAAGGACTTCTGTGACAAG AATTCTATTCCCGTTCCTCAGGGTACCCGAGTCAATGAGCTTCGGGCCTTGGTGCGCAAGCATCGAGCCGAAATC ATGGATGACACTGTTGGTGCCAAGGCTTCTTTAGCGTTTGGTGCTGCGACTTCGAATGCTCAAAATGAGTACGCA AAGGCTACCGACAGTGCTTCATTGGCTGCCCAGGATGCTTTTGATCGTGCCACTGAGGCCTGGTCTGACAGCCGG CTCAAGTCATATCTCGATGCTCGGGGCATTCCTGTCCCACACTCGTCGACGACAGATGAGCTTCGGGCGCTGGTC CGAAAGAATGTGCACAAGATTACGACGGGTGGCAGTGCATGGACCTATGATGACTTGTCTCGCGAGAAGCTGCAG CAGTACCTTGCCCAGCAAGGCGACGCTGCTGCCAAGACGCTTGCTGAGAAGAAAGACGCTACTCGTGAGGAGCTC GTCAGTGCTGCACAATCGGCGTATTCATCAGCATCGACGGCAGGCGGCGAGGCTTATGCCTCGGCAACCAGTTAC CTGGCCGAGGCCACGGCGGCCGCCAAGAACAGCGCTTTCGACACTTGGACCGAGACCGATCTCAAGGCTTACCTT GATAGCTATGGCGTCCCCGTTCCGCAGGGCTCCAAGCTTGAGGAGCTCAAAGCCCTAGCTCGCAAGCAGTCGACA TACTTCAAATACGGTACCTCATCGCCTAGCGAGACTCTGTTTGCTAAGCTCGAAGAGACTGCCAGGGGAGGATGG AACTGGATCGCTCATCAGCTCAACCTGGGTGGTGAGGCTGCCCGCGAGAAGGCGGCCGAAGCTGAGGCTCAAGCA AAGGCCAAGGCGGAGCAACTCAGGGAGGAGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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