Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4240
Gene name
LocationContig_348:13964..15335
Strand+
Gene length (bp)1371
Transcript length (bp)1371
Coding sequence length (bp)1371
Protein length (aa) 457

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11790 Glyco_hydro_cc Glycosyl hydrolase catalytic core 4.4E-56 223 452

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q09788|ASL1_SCHPO Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 220 454 1.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4240
MYPKSLATMAVVATLSQQSLAFNSHRHLHRQEAKRDVAMDMVTVWETVYVTESADPGPQQTTVTAFTTTTMDSMP
QQSSPSEAVAPVEQPPAAAPAPPAQEAPAAPPAQDAPPAPPAEKPPVAPPAEQPPAATPVKQAPPAPPVEQPPPS
SAVQEPPPPPPQTTLATAVKPAPPASAPQISSPAPPVSAIKVQPQSSSQPPAAKPSGSNKMPSSGPGFVGKRGLA
YNDGSLANTFGSSCQQCGWAYNWASSPQGLDPKISFVPMLWGDSPTHTGHWDSDAEKALASGTKALFSFNEPDIK
GQANLSPQQAAASHVKYMNKYAGRALIGAPSVSNSNLEGEGLAWLKSFMSACENQQEKCQVDFCNVHWYAPASAA
DTLFDHLEQAHQACGGKPVWLTEFAPVGDPSQTSGFLQTVMPKLEKLDYVDAYSYFMVSSGNLMSSATDLSSFGK
VYASMA*
Coding >OphauG2|4240
ATGTACCCCAAAAGTCTGGCCACCATGGCCGTCGTGGCTACTCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC
CGCCACCTTCACCGCCAAGAGGCCAAGCGCGATGTGGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG
ACGGAGTCGGCCGACCCCGGCCCCCAGCAGACGACTGTCACGGCCTTTACCACCACCACCATGGACTCTATGCCT
CAGCAGTCGTCGCCCAGCGAGGCCGTTGCCCCGGTTGAGCAGCCTCCTGCTGCTGCTCCTGCGCCTCCAGCTCAA
GAGGCTCCGGCCGCGCCTCCAGCTCAAGACGCTCCGCCTGCGCCTCCCGCTGAAAAGCCCCCGGTTGCGCCGCCA
GCTGAACAGCCCCCCGCTGCCACTCCCGTCAAACAGGCTCCGCCTGCGCCTCCGGTCGAGCAGCCCCCGCCAAGC
TCGGCTGTTCAGGAGCCCCCTCCACCTCCCCCTCAGACCACCTTGGCCACGGCCGTCAAGCCTGCTCCTCCCGCT
TCTGCGCCACAGATCAGCAGCCCTGCTCCTCCTGTCTCTGCTATCAAGGTGCAGCCTCAGAGCTCGTCGCAGCCT
CCTGCTGCCAAGCCCTCGGGCAGCAACAAGATGCCCAGCTCGGGTCCCGGCTTCGTTGGAAAGCGTGGTCTCGCC
TACAACGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAGTGCGGCTGGGCTTACAACTGGGCTTCG
TCGCCTCAGGGCCTCGACCCCAAGATCAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACGGGCCAC
TGGGATTCTGACGCCGAAAAGGCTCTTGCCAGCGGTACCAAGGCGCTCTTTAGCTTCAACGAACCCGACATCAAG
GGCCAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC
CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCATGGCTCAAGAGCTTCATGAGC
GCCTGCGAGAACCAGCAGGAGAAGTGCCAGGTTGATTTCTGCAACGTGCATTGGTATGCGCCTGCTTCGGCTGCC
GACACGCTCTTTGACCACCTCGAACAGGCTCACCAGGCTTGCGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT
CCTGTCGGTGACCCATCGCAGACGTCGGGCTTCTTGCAGACGGTCATGCCCAAGCTTGAGAAACTCGACTACGTT
GATGCCTACTCGTACTTTATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACTGATTTGAGCAGCTTTGGCAAA
GTTTACGCCAGTATGGCTTAA
Transcript >OphauG2|4240
ATGTACCCCAAAAGTCTGGCCACCATGGCCGTCGTGGCTACTCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC
CGCCACCTTCACCGCCAAGAGGCCAAGCGCGATGTGGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG
ACGGAGTCGGCCGACCCCGGCCCCCAGCAGACGACTGTCACGGCCTTTACCACCACCACCATGGACTCTATGCCT
CAGCAGTCGTCGCCCAGCGAGGCCGTTGCCCCGGTTGAGCAGCCTCCTGCTGCTGCTCCTGCGCCTCCAGCTCAA
GAGGCTCCGGCCGCGCCTCCAGCTCAAGACGCTCCGCCTGCGCCTCCCGCTGAAAAGCCCCCGGTTGCGCCGCCA
GCTGAACAGCCCCCCGCTGCCACTCCCGTCAAACAGGCTCCGCCTGCGCCTCCGGTCGAGCAGCCCCCGCCAAGC
TCGGCTGTTCAGGAGCCCCCTCCACCTCCCCCTCAGACCACCTTGGCCACGGCCGTCAAGCCTGCTCCTCCCGCT
TCTGCGCCACAGATCAGCAGCCCTGCTCCTCCTGTCTCTGCTATCAAGGTGCAGCCTCAGAGCTCGTCGCAGCCT
CCTGCTGCCAAGCCCTCGGGCAGCAACAAGATGCCCAGCTCGGGTCCCGGCTTCGTTGGAAAGCGTGGTCTCGCC
TACAACGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAGTGCGGCTGGGCTTACAACTGGGCTTCG
TCGCCTCAGGGCCTCGACCCCAAGATCAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACGGGCCAC
TGGGATTCTGACGCCGAAAAGGCTCTTGCCAGCGGTACCAAGGCGCTCTTTAGCTTCAACGAACCCGACATCAAG
GGCCAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC
CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCATGGCTCAAGAGCTTCATGAGC
GCCTGCGAGAACCAGCAGGAGAAGTGCCAGGTTGATTTCTGCAACGTGCATTGGTATGCGCCTGCTTCGGCTGCC
GACACGCTCTTTGACCACCTCGAACAGGCTCACCAGGCTTGCGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT
CCTGTCGGTGACCCATCGCAGACGTCGGGCTTCTTGCAGACGGTCATGCCCAAGCTTGAGAAACTCGACTACGTT
GATGCCTACTCGTACTTTATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACTGATTTGAGCAGCTTTGGCAAA
GTTTACGCCAGTATGGCTTAA
Gene >OphauG2|4240
ATGTACCCCAAAAGTCTGGCCACCATGGCCGTCGTGGCTACTCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC
CGCCACCTTCACCGCCAAGAGGCCAAGCGCGATGTGGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG
ACGGAGTCGGCCGACCCCGGCCCCCAGCAGACGACTGTCACGGCCTTTACCACCACCACCATGGACTCTATGCCT
CAGCAGTCGTCGCCCAGCGAGGCCGTTGCCCCGGTTGAGCAGCCTCCTGCTGCTGCTCCTGCGCCTCCAGCTCAA
GAGGCTCCGGCCGCGCCTCCAGCTCAAGACGCTCCGCCTGCGCCTCCCGCTGAAAAGCCCCCGGTTGCGCCGCCA
GCTGAACAGCCCCCCGCTGCCACTCCCGTCAAACAGGCTCCGCCTGCGCCTCCGGTCGAGCAGCCCCCGCCAAGC
TCGGCTGTTCAGGAGCCCCCTCCACCTCCCCCTCAGACCACCTTGGCCACGGCCGTCAAGCCTGCTCCTCCCGCT
TCTGCGCCACAGATCAGCAGCCCTGCTCCTCCTGTCTCTGCTATCAAGGTGCAGCCTCAGAGCTCGTCGCAGCCT
CCTGCTGCCAAGCCCTCGGGCAGCAACAAGATGCCCAGCTCGGGTCCCGGCTTCGTTGGAAAGCGTGGTCTCGCC
TACAACGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAGTGCGGCTGGGCTTACAACTGGGCTTCG
TCGCCTCAGGGCCTCGACCCCAAGATCAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACGGGCCAC
TGGGATTCTGACGCCGAAAAGGCTCTTGCCAGCGGTACCAAGGCGCTCTTTAGCTTCAACGAACCCGACATCAAG
GGCCAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC
CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCATGGCTCAAGAGCTTCATGAGC
GCCTGCGAGAACCAGCAGGAGAAGTGCCAGGTTGATTTCTGCAACGTGCATTGGTATGCGCCTGCTTCGGCTGCC
GACACGCTCTTTGACCACCTCGAACAGGCTCACCAGGCTTGCGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT
CCTGTCGGTGACCCATCGCAGACGTCGGGCTTCTTGCAGACGGTCATGCCCAAGCTTGAGAAACTCGACTACGTT
GATGCCTACTCGTACTTTATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACTGATTTGAGCAGCTTTGGCAAA
GTTTACGCCAGTATGGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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