© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|424 |
| Gene name | |
| Location | Contig_1099:3822..5035 |
| Strand | + |
| Gene length (bp) | 1213 |
| Transcript length (bp) | 1131 |
| Coding sequence length (bp) | 1131 |
| Protein length (aa) | 377 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12955 | DUF3844 | Domain of unknown function (DUF3844) | 2.8E-35 | 272 | 370 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74728|YH93_SCHPO | Uncharacterized endoplasmic reticulum membrane protein C1709.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1709.03 PE=3 SV=2 | 210 | 368 | 4.0E-17 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 335 | 357 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|424 MKLCVGLSAAFAGLVAAAQNADVYVVPAPDVSTPGSAPTSLSPSMARLVLLQRLSPGGRGPYVSDFPTDTALEQI VSIVNRFGKAPPPLFAPSGTHDSSQLVVLLEGMSAAQMDEAAQAFKTEPTFTITNPPWGKAHDDLIRKDLRSLGV VNGNECSMAQAFNPLDECWGGKQAAVVRYKVDKDPDSLNHVLRRLSQLSQLGKAGEMETTFVLLPSTSRASSWSQ QPSELRRRQAAEQVMASPDKSAQPAAPASWGLDKTLLMASGSRVASCFTSQESCVTATGNCSGHGTCLNKYPKEE SSCFACHCLGTRTKSGSLTHWAGATCSKKDVSVAFWLFAGFTVAIVSVLWMAIYMLFDVGQEKLPGVIGAGVSRS K* |
| Coding | >OphauG2|424 ATGAAGCTCTGTGTCGGGCTTTCTGCGGCTTTTGCCGGGCTCGTGGCAGCTGCTCAAAATGCCGACGTCTATGTT GTGCCTGCGCCAGATGTCTCGACTCCGGGCTCAGCCCCGACGTCGCTGTCGCCCAGCATGGCGCGGCTGGTGCTG CTTCAACGCCTATCTCCTGGCGGACGGGGACCGTACGTCAGCGACTTTCCCACAGACACCGCCTTGGAGCAGATT GTGTCGATTGTCAACCGATTCGGCAAAGCACCGCCGCCCCTATTTGCTCCCAGTGGTACGCACGACTCGAGCCAG CTTGTGGTGTTGCTCGAGGGAATGTCGGCTGCACAAATGGACGAGGCGGCGCAGGCATTCAAGACGGAACCTACC TTTACAATTACAAACCCGCCATGGGGAAAGGCACACGATGATCTCATTAGGAAGGATCTGCGCAGCCTTGGCGTG GTCAACGGCAATGAGTGCAGCATGGCACAGGCCTTCAACCCGCTGGATGAATGCTGGGGCGGAAAACAGGCTGCT GTGGTTCGCTACAAGGTTGACAAGGACCCCGACTCGCTCAACCATGTTTTGCGCAGGCTCTCTCAGCTCTCGCAG CTTGGCAAAGCCGGTGAAATGGAGACTACGTTTGTGCTTCTACCCTCGACAAGCCGCGCATCGTCGTGGTCTCAG CAGCCTTCGGAGCTGCGCCGTCGCCAAGCAGCAGAGCAAGTAATGGCTTCGCCAGACAAGTCTGCGCAGCCCGCA GCCCCGGCTTCTTGGGGCTTGGACAAGACTTTGTTGATGGCATCTGGGTCTCGCGTGGCATCGTGTTTTACAAGC CAGGAAAGCTGCGTTACAGCTACGGGCAATTGTTCGGGGCACGGAACGTGTCTGAATAAGTATCCCAAGGAGGAA AGCAGCTGCTTCGCCTGTCATTGCCTTGGGACTCGCACCAAATCTGGCAGTCTAACGCACTGGGCTGGCGCGACA TGTTCCAAGAAGGATGTAAGTGTCGCTTTTTGGTTGTTTGCTGGGTTTACCGTGGCCATTGTCAGCGTGCTGTGG ATGGCCATCTACATGCTTTTTGACGTGGGCCAGGAGAAGCTACCAGGCGTGATTGGAGCAGGGGTATCGCGGTCC AAGTAG |
| Transcript | >OphauG2|424 ATGAAGCTCTGTGTCGGGCTTTCTGCGGCTTTTGCCGGGCTCGTGGCAGCTGCTCAAAATGCCGACGTCTATGTT GTGCCTGCGCCAGATGTCTCGACTCCGGGCTCAGCCCCGACGTCGCTGTCGCCCAGCATGGCGCGGCTGGTGCTG CTTCAACGCCTATCTCCTGGCGGACGGGGACCGTACGTCAGCGACTTTCCCACAGACACCGCCTTGGAGCAGATT GTGTCGATTGTCAACCGATTCGGCAAAGCACCGCCGCCCCTATTTGCTCCCAGTGGTACGCACGACTCGAGCCAG CTTGTGGTGTTGCTCGAGGGAATGTCGGCTGCACAAATGGACGAGGCGGCGCAGGCATTCAAGACGGAACCTACC TTTACAATTACAAACCCGCCATGGGGAAAGGCACACGATGATCTCATTAGGAAGGATCTGCGCAGCCTTGGCGTG GTCAACGGCAATGAGTGCAGCATGGCACAGGCCTTCAACCCGCTGGATGAATGCTGGGGCGGAAAACAGGCTGCT GTGGTTCGCTACAAGGTTGACAAGGACCCCGACTCGCTCAACCATGTTTTGCGCAGGCTCTCTCAGCTCTCGCAG CTTGGCAAAGCCGGTGAAATGGAGACTACGTTTGTGCTTCTACCCTCGACAAGCCGCGCATCGTCGTGGTCTCAG CAGCCTTCGGAGCTGCGCCGTCGCCAAGCAGCAGAGCAAGTAATGGCTTCGCCAGACAAGTCTGCGCAGCCCGCA GCCCCGGCTTCTTGGGGCTTGGACAAGACTTTGTTGATGGCATCTGGGTCTCGCGTGGCATCGTGTTTTACAAGC CAGGAAAGCTGCGTTACAGCTACGGGCAATTGTTCGGGGCACGGAACGTGTCTGAATAAGTATCCCAAGGAGGAA AGCAGCTGCTTCGCCTGTCATTGCCTTGGGACTCGCACCAAATCTGGCAGTCTAACGCACTGGGCTGGCGCGACA TGTTCCAAGAAGGATGTAAGTGTCGCTTTTTGGTTGTTTGCTGGGTTTACCGTGGCCATTGTCAGCGTGCTGTGG ATGGCCATCTACATGCTTTTTGACGTGGGCCAGGAGAAGCTACCAGGCGTGATTGGAGCAGGGGTATCGCGGTCC AAGTAG |
| Gene | >OphauG2|424 ATGAAGCTCTGTGTCGGGCTTTCTGCGGCTTTTGCCGGGCTCGTGGCAGCTGCTCAAAATGCCGACGTCTATGTT GTGCCTGCGCCAGATGTCTCGACTCCGGGCTCAGCCCCGACGTCGCTGTCGCCCAGCATGGCGCGGCTGGTGCTG CTTCAACGCCTATCTCCTGGCGGACGGGGACCGTACGTCAGCGACTTTCCCACAGACACCGCCTTGGAGCAGATT GTGTCGATTGTCAACCGATTCGGCAAAGCACCGCCGCCCCTATTTGCTCCCAGTGGTACGCACGACTCGAGCCAG CTTGTGGTGTTGCTCGAGGGAATGTCGGCTGCACAAATGGACGAGGCGGCGCAGGCATTCAAGACGGAACCTACC TTTACAATTACAAACCCGCCATGGGGAAAGGCACACGATGATCTCATTAGGAAGGATCTGCGCAGCCTTGGCGTG GTCAACGGCAATGAGTGCAGCATGGCACAGGCCTTCAACCCGCTGGATGAATGCTGGGGCGGAAAACAGGCTGCT GTGGTTCGCTACAAGGTTGACAAGGTACCGACGCCCATGAGGCCACCATGGATATATTCTGTCTGGAGAAGAAAG GAGGAAAGACGGCAGCTAACACTTGCAGCAGGACCCCGACTCGCTCAACCATGTTTTGCGCAGGCTCTCTCAGCT CTCGCAGCTTGGCAAAGCCGGTGAAATGGAGACTACGTTTGTGCTTCTACCCTCGACAAGCCGCGCATCGTCGTG GTCTCAGCAGCCTTCGGAGCTGCGCCGTCGCCAAGCAGCAGAGCAAGTAATGGCTTCGCCAGACAAGTCTGCGCA GCCCGCAGCCCCGGCTTCTTGGGGCTTGGACAAGACTTTGTTGATGGCATCTGGGTCTCGCGTGGCATCGTGTTT TACAAGCCAGGAAAGCTGCGTTACAGCTACGGGCAATTGTTCGGGGCACGGAACGTGTCTGAATAAGTATCCCAA GGAGGAAAGCAGCTGCTTCGCCTGTCATTGCCTTGGGACTCGCACCAAATCTGGCAGTCTAACGCACTGGGCTGG CGCGACATGTTCCAAGAAGGATGTAAGTGTCGCTTTTTGGTTGTTTGCTGGGTTTACCGTGGCCATTGTCAGCGT GCTGTGGATGGCCATCTACATGCTTTTTGACGTGGGCCAGGAGAAGCTACCAGGCGTGATTGGAGCAGGGGTATC GCGGTCCAAGTAG |