© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4238 |
| Gene name | |
| Location | Contig_348:9407..10920 |
| Strand | - |
| Gene length (bp) | 1513 |
| Transcript length (bp) | 1266 |
| Coding sequence length (bp) | 1266 |
| Protein length (aa) | 422 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 2.2E-08 | 58 | 90 |
| PF11951 | Fungal_trans_2 | Fungal specific transcription factor domain | 4.3E-06 | 113 | 215 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q59QC7|UPC2_CANAL | Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 | 8 | 88 | 4.0E-12 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 37 | 88 | 1.0E-09 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 39 | 88 | 7.0E-09 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 109 | 217 | 1.0E-07 |
| sp|Q59MD2|UME6_CANAL | Transcriptional regulatory protein UME6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UME6 PE=2 SV=1 | 40 | 91 | 8.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q59QC7|UPC2_CANAL | Sterol uptake control protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UPC2 PE=1 SV=1 | 8 | 88 | 4.0E-12 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 37 | 88 | 1.0E-09 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 39 | 88 | 7.0E-09 |
| sp|Q12151|UPC2_YEAST | Sterol uptake control protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPC2 PE=1 SV=1 | 109 | 217 | 1.0E-07 |
| sp|Q59MD2|UME6_CANAL | Transcriptional regulatory protein UME6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UME6 PE=2 SV=1 | 40 | 91 | 8.0E-07 |
| sp|Q05958|ECM22_YEAST | Sterol regulatory element-binding protein ECM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM22 PE=1 SV=1 | 109 | 213 | 5.0E-06 |
| sp|P40971|LYS14_YEAST | Lysine biosynthesis regulatory protein LYS14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS14 PE=1 SV=2 | 39 | 88 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0050789 | regulation of biological process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0065007 | biological regulation | No |
| GO:0005488 | binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:0043169 | cation binding | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4238 MKPSSRPLTATSETPRHNVSSHVHEASSGSSSWRSADSRPVARKRKWERRGHTKSRRGCLDCKRRRIKCQETRPE CGHCLKIGLDCQYPSEAQLMRQPQHRVPVFSFEDMRFFHYFLTKGYPHHPLKQQDIWTHEIPSIAHNHEFLMHAI LGLAASELSHGDASLVTAAISYRVRAVSAIKKRLVEASTTETTYEEANALVATCFALTFQSVSLDDGLAEYMTFI RGIFIVGMQMLLKGISPIFGCLFDGKQNEAMAPVMQHLPLIQKPWVDASVVAISGLRPLCATALDLDYYHQLLNI ASKLYTSSFDAYKAIGREYGWWMMLPHASFQELINFDRPIILLMHTHWIALKQIMAPITEREHDLDQRQPESQQG AIDPGSSRWLKYLNARVREDHCTYNKWPQWVEEQLDLDVTHFGKSR* |
| Coding | >OphauG2|4238 ATGAAGCCGTCATCTCGTCCCTTGACTGCTACCAGTGAAACACCTAGGCACAATGTTTCGTCACATGTCCACGAG GCTTCATCGGGCAGCTCAAGTTGGCGCAGCGCCGACTCTCGCCCCGTAGCGCGAAAGCGAAAATGGGAGAGGCGA GGTCATACCAAAAGCCGCCGGGGGTGTCTCGATTGCAAGAGGCGGCGCATCAAGTGTCAGGAAACTCGCCCGGAG TGTGGCCACTGTCTCAAGATAGGACTTGATTGCCAATATCCCTCCGAGGCTCAACTGATGCGCCAGCCTCAACAC CGAGTTCCCGTCTTCAGCTTTGAGGATATGCGCTTCTTTCATTACTTCTTGACCAAGGGTTATCCACACCACCCA CTCAAGCAACAAGACATTTGGACCCACGAGATCCCAAGTATTGCACACAATCATGAGTTTTTGATGCATGCCATC CTAGGCCTTGCCGCCTCGGAACTGTCTCATGGCGATGCAAGCCTGGTCACGGCTGCCATCAGCTATCGTGTCAGA GCCGTCAGCGCCATCAAAAAGCGGCTGGTTGAAGCGTCGACGACAGAGACCACGTATGAAGAGGCGAATGCTTTG GTCGCCACGTGTTTCGCCCTGACGTTTCAGTCAGTCAGCCTCGATGACGGGCTGGCAGAGTACATGACATTTATC CGCGGCATTTTCATTGTTGGCATGCAGATGCTGCTCAAGGGTATTTCTCCCATCTTTGGCTGTCTCTTTGATGGA AAGCAGAACGAGGCCATGGCACCTGTGATGCAGCATCTTCCCCTGATTCAAAAGCCATGGGTCGACGCGTCAGTA GTGGCCATTTCTGGCCTCAGGCCCCTGTGCGCCACTGCCCTAGACCTTGACTACTATCATCAGCTACTCAATATT GCCAGCAAGCTCTATACCAGTTCTTTTGACGCATACAAAGCCATAGGCCGCGAATACGGCTGGTGGATGATGCTT CCCCACGCTTCGTTTCAGGAGCTCATCAACTTTGATCGTCCGATTATACTTTTGATGCATACGCACTGGATCGCT CTCAAGCAAATCATGGCCCCTATTACTGAGAGAGAGCATGACCTGGACCAGAGGCAGCCCGAGTCTCAACAAGGC GCCATAGATCCGGGGTCAAGTCGGTGGCTCAAATATTTGAATGCAAGGGTGCGCGAGGACCATTGCACATACAAT AAATGGCCGCAATGGGTAGAGGAACAGCTTGACCTCGACGTGACGCATTTTGGCAAATCCAGATGA |
| Transcript | >OphauG2|4238 ATGAAGCCGTCATCTCGTCCCTTGACTGCTACCAGTGAAACACCTAGGCACAATGTTTCGTCACATGTCCACGAG GCTTCATCGGGCAGCTCAAGTTGGCGCAGCGCCGACTCTCGCCCCGTAGCGCGAAAGCGAAAATGGGAGAGGCGA GGTCATACCAAAAGCCGCCGGGGGTGTCTCGATTGCAAGAGGCGGCGCATCAAGTGTCAGGAAACTCGCCCGGAG TGTGGCCACTGTCTCAAGATAGGACTTGATTGCCAATATCCCTCCGAGGCTCAACTGATGCGCCAGCCTCAACAC CGAGTTCCCGTCTTCAGCTTTGAGGATATGCGCTTCTTTCATTACTTCTTGACCAAGGGTTATCCACACCACCCA CTCAAGCAACAAGACATTTGGACCCACGAGATCCCAAGTATTGCACACAATCATGAGTTTTTGATGCATGCCATC CTAGGCCTTGCCGCCTCGGAACTGTCTCATGGCGATGCAAGCCTGGTCACGGCTGCCATCAGCTATCGTGTCAGA GCCGTCAGCGCCATCAAAAAGCGGCTGGTTGAAGCGTCGACGACAGAGACCACGTATGAAGAGGCGAATGCTTTG GTCGCCACGTGTTTCGCCCTGACGTTTCAGTCAGTCAGCCTCGATGACGGGCTGGCAGAGTACATGACATTTATC CGCGGCATTTTCATTGTTGGCATGCAGATGCTGCTCAAGGGTATTTCTCCCATCTTTGGCTGTCTCTTTGATGGA AAGCAGAACGAGGCCATGGCACCTGTGATGCAGCATCTTCCCCTGATTCAAAAGCCATGGGTCGACGCGTCAGTA GTGGCCATTTCTGGCCTCAGGCCCCTGTGCGCCACTGCCCTAGACCTTGACTACTATCATCAGCTACTCAATATT GCCAGCAAGCTCTATACCAGTTCTTTTGACGCATACAAAGCCATAGGCCGCGAATACGGCTGGTGGATGATGCTT CCCCACGCTTCGTTTCAGGAGCTCATCAACTTTGATCGTCCGATTATACTTTTGATGCATACGCACTGGATCGCT CTCAAGCAAATCATGGCCCCTATTACTGAGAGAGAGCATGACCTGGACCAGAGGCAGCCCGAGTCTCAACAAGGC GCCATAGATCCGGGGTCAAGTCGGTGGCTCAAATATTTGAATGCAAGGGTGCGCGAGGACCATTGCACATACAAT AAATGGCCGCAATGGGTAGAGGAACAGCTTGACCTCGACGTGACGCATTTTGGCAAATCCAGATGA |
| Gene | >OphauG2|4238 ATGAAGCCGTCATCTCGTCCCTTGACTGCTACCAGTGAAACACCTAGGCACAATGTTTCGTCACATGTCCACGAG GCTTCATCGGGCAGCTCAAGTTGGCGCAGCGCCGACTCTCGCCCCGTAGCGCGAAAGCGAAAATGGGAGAGGCGA GGTCATACCAAAAGCCGCCGGGGGTGTCTCGATTGCAAGAGGCGGCGCATCAAGGTACTCCTCCCTATCCATCAT GCGTCTACCATTCCAAGTAAGTAGTAATGCCGACTGCGGGATAGTGTCAGGAAACTCGCCCGGAGTGTGGCCACT GTCTCAAGATAGGACTTGATTGCCAATATCCCTCCGAGGCTCAACTGATGCGCCAGGTGCGTGGCCCGCGTCGGC AAACCCGGAAGACCCAAAAAAAAGACACGACTAACAGCAGCGAGTAGCCTCAACACCGAGTTCCCGTCTTCAGCT TTGAGGATATGCGCTTCTTTCATTACTTCTTGACCAAGGGTTATCCACACCACCCACTCAAGCAACAAGACATTT GGACCCACGAGATCCCAAGTATTGCACACAATGTGCGAGTCCTAAATACTGGCCCGACGAGGAGACGCTAAAGCA GACCTACAGCATGAGTTTTTGATGCATGCCATCCTAGGCCTTGCCGCCTCGGAACTGTCTCATGGCGATGCAAGC CTGGTCACGGCTGCCATCAGCTATCGTGTCAGAGCCGTCAGCGCCATCAAAAAGCGGCTGGTTGAAGCGTCGACG ACAGAGACCACGTATGAAGAGGCGAATGCTTTGGTCGCCACGTGTTTCGCCCTGACGTTTCAGTCAGTCAGCCTC GATGACGGGCTGGCAGAGTACATGACATTTATCCGCGGCATTTTCATTGTTGGCATGCAGATGCTGCTCAAGGGT ATTTCTCCCATCTTTGGCTGTCTCTTTGATGGAAAGCAGAACGAGGCCATGGCACCTGTGATGCAGCATCTTCCC CTGATTCAAAAGCCATGGGTCGACGCGTCAGTAGTGGCCATTTCTGGCCTCAGGCCCCTGTGCGCCACTGCCCTA GACCTTGACTACTATCATCAGCTACTCAATATTGCCAGCAAGCTCTATACCAGTTCTTTTGACGGTGAGCAATCC AACGCCCTCTCGAGATGGCTGAGACGAGACACCTGCGGTTGACGTAAACCAAGCATACAAAGCCATAGGCCGCGA ATACGGCTGGTGGATGATGCTTCCCCACGCTTCGTTTCAGGAGCTCATCAACTTTGATCGTCCGATTATACTTTT GATGCATACGCACTGGATCGCTCTCAAGCAAATCATGGCCCCTATTACTGAGAGAGAGCATGACCTGGACCAGAG GCAGCCCGAGTCTCAACAAGGCGCCATAGATCCGGGGTCAAGTCGGTGGCTCAAATATTTGAATGCAAGGGTGCG CGAGGACCATTGCACATACAATAAATGGCCGCAATGGGTAGAGGAACAGCTTGACCTCGACGTGACGCATTTTGG CAAATCCAGATGA |