Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4210
Gene name
LocationContig_343:2106..2816
Strand-
Gene length (bp)710
Transcript length (bp)444
Coding sequence length (bp)444
Protein length (aa) 148

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06179 Med22 Surfeit locus protein 5 subunit 22 of Mediator complex 5.7E-19 15 116

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016592 mediator complex Yes
GO:0006357 regulation of transcription by RNA polymerase II Yes
GO:0003712 transcription coregulator activity Yes
GO:0008150 biological_process No
GO:0050794 regulation of cellular process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0019222 regulation of metabolic process No
GO:0140513 nuclear protein-containing complex No
GO:0050789 regulation of biological process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0010468 regulation of gene expression No
GO:0060255 regulation of macromolecule metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0032991 protein-containing complex No
GO:0006355 regulation of transcription, DNA-templated No
GO:0009889 regulation of biosynthetic process No
GO:0005575 cellular_component No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0051252 regulation of RNA metabolic process No
GO:0031326 regulation of cellular biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5632
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4210 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|211
Ophiocordyceps camponoti-floridani Ophcf2|07021
Ophiocordyceps kimflemingae Ophio5|6693
Ophiocordyceps subramaniannii Hirsu2|7743

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4210
MDRSQATASNLMDMHNRLIADILTRFRTLIMSATIQAQADSNSANPETISVARISMKLEFDGLFSSIKDLLSLSR
RIKELWTFGPLGQGDPNRQSTESAIGSSVSQVSQLLNTIETSNMKRLATEAGGEWQQLLHDAPDSSSAPSGN*
Coding >OphauG2|4210
ATGGACCGCTCTCAAGCTACCGCGTCTAATCTCATGGACATGCATAACCGCCTCATTGCCGATATCCTCACACGC
TTCCGAACCCTCATCATGTCGGCAACAATTCAAGCCCAAGCCGACTCCAACAGCGCAAATCCTGAGACAATATCC
GTCGCCCGCATATCAATGAAGCTCGAGTTTGACGGTTTGTTCTCCTCCATCAAAGACCTCCTCTCTCTCTCTCGC
CGCATCAAGGAACTCTGGACCTTTGGCCCCCTCGGCCAAGGCGACCCCAACCGCCAATCCACAGAGTCGGCCATT
GGCAGCAGCGTCTCCCAAGTCTCACAGCTCCTCAACACCATAGAAACCTCAAACATGAAGCGTCTGGCTACCGAA
GCCGGTGGGGAGTGGCAACAGCTCCTTCATGACGCCCCGGATTCGTCTTCGGCCCCATCAGGCAATTAA
Transcript >OphauG2|4210
ATGGACCGCTCTCAAGCTACCGCGTCTAATCTCATGGACATGCATAACCGCCTCATTGCCGATATCCTCACACGC
TTCCGAACCCTCATCATGTCGGCAACAATTCAAGCCCAAGCCGACTCCAACAGCGCAAATCCTGAGACAATATCC
GTCGCCCGCATATCAATGAAGCTCGAGTTTGACGGTTTGTTCTCCTCCATCAAAGACCTCCTCTCTCTCTCTCGC
CGCATCAAGGAACTCTGGACCTTTGGCCCCCTCGGCCAAGGCGACCCCAACCGCCAATCCACAGAGTCGGCCATT
GGCAGCAGCGTCTCCCAAGTCTCACAGCTCCTCAACACCATAGAAACCTCAAACATGAAGCGTCTGGCTACCGAA
GCCGGTGGGGAGTGGCAACAGCTCCTTCATGACGCCCCGGATTCGTCTTCGGCCCCATCAGGCAATTAA
Gene >OphauG2|4210
ATGGACCGCTCTCAAGCTACCGCGTCTAATCTCATGGGTCCGCTCCCTTGTCCGCTTCTCCGCAACGACGCTGAC
AAACAAACTCCGCGCGCGGAGCAGACATGCATAACCGCCTCATTGCCGATATCCTCACACGCTTCCGAACCCTCA
TCATGTCGGCAACAATTCAAGCCCAAGCCGACTCCAACAGCGCAAATCCTGAGACAATATCCGTCGCCCGCATAT
CAATGAAGCTCGAGTTTGACGGTTTGGTACTTGGCCCTGCCTGCGTCTGCCGCGTCTCCGATTCCTACTTTGGAG
AAAAAAAAAAGTCTTTTTTGTTCACCATGAATCCTACAATGACGCTCTCGGCTTGCTCTCAACTTGCATCTCCTT
CACCATGCATCCGTCGCCCGTCTCCTTTGCCATTGTCCCTCGAGTCACATACTACAATCCTCTAACTTCTTCAAC
CCCAGTTCTCCTCCATCAAAGACCTCCTCTCTCTCTCTCGCCGCATCAAGGAACTCTGGACCTTTGGCCCCCTCG
GCCAAGGCGACCCCAACCGCCAATCCACAGAGTCGGCCATTGGCAGCAGCGTCTCCCAAGTCTCACAGCTCCTCA
ACACCATAGAAACCTCAAACATGAAGCGTCTGGCTACCGAAGCCGGTGGGGAGTGGCAACAGCTCCTTCATGACG
CCCCGGATTCGTCTTCGGCCCCATCAGGCAATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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