© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4203 |
| Gene name | |
| Location | Contig_342:3538..5333 |
| Strand | - |
| Gene length (bp) | 1795 |
| Transcript length (bp) | 1626 |
| Coding sequence length (bp) | 1626 |
| Protein length (aa) | 542 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.4E-30 | 63 | 440 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.0E-06 | 132 | 456 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 9 | 488 | 9.0E-118 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 21 | 494 | 7.0E-116 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 49 | 249 | 1.0E-33 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 49 | 249 | 1.0E-32 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 26 | 452 | 6.0E-31 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 9 | 488 | 9.0E-118 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 21 | 494 | 7.0E-116 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 49 | 249 | 1.0E-33 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 49 | 249 | 1.0E-32 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 26 | 452 | 6.0E-31 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 35 | 303 | 4.0E-27 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 12 | 371 | 3.0E-26 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 48 | 314 | 9.0E-18 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 47 | 395 | 1.0E-17 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 14 | 414 | 7.0E-17 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 33 | 263 | 1.0E-16 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 42 | 445 | 2.0E-15 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 48 | 495 | 3.0E-14 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 45 | 380 | 5.0E-13 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 13 | 258 | 2.0E-10 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 39 | 361 | 2.0E-09 |
| sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 39 | 229 | 1.0E-07 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 38 | 312 | 4.0E-07 |
| sp|P27669|UHPC_SALTY | Regulatory protein UhpC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=uhpC PE=3 SV=1 | 24 | 251 | 5.0E-07 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 2 | 250 | 2.0E-06 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 37 | 389 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 101 | 123 | 22 |
| 3 | 130 | 152 | 22 |
| 4 | 157 | 179 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 223 | 245 | 22 |
| 7 | 312 | 334 | 22 |
| 8 | 344 | 366 | 22 |
| 9 | 373 | 395 | 22 |
| 10 | 405 | 427 | 22 |
| 11 | 434 | 456 | 22 |
| 12 | 480 | 502 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4203 MNPSAQVLAKPGSKTSSDDTPVSIDIFQSSARPQDENDQHDYPVEAIERIYRKLDWRIIPPFWILYFLCSAIRSN IGIAQTMNRDQKHNLGTVLGLSSRDVSTALALFYVSYVVFDFPSNLVMSKLSPRVWMARIVFATGLVGACFAAIE HAWSLKLLRFLLGLVVAGVWPGMAFYLTLFYPPSRTGKRIGMYFTAAQVSAAVASLVSAAFQLMDGVGGLTGFRW MFLVYGLVTIVLSFVLLWWLPEQPLAPNQERQVSAWLRWLPATPEPLTGRDAVMHYHDLTRVYNARPWTLKDLGW TMLDWRLWPLCLMYFGVVGVGIGTQLYGTVIIAAIRPQASDIQVSLLFAPVWIMDLIAILILVPISDRFHHHRAF FFAGAACVQIAGLLTMTFAVDNGWARYGGMLMVGFGLGPTVPTCMAWTSEVFQRRHGQVGVAAATALVSGLGNMG SVTTTYALYTGWAEDAKPGKHQFRMSNLTMIGILAMSIASALVMKALLSIVGNEPSSRLGKAGAIEDGAARREVQ QRGFENLGRRGRNQVS* |
| Coding | >OphauG2|4203 ATGAATCCATCCGCTCAGGTGCTGGCCAAGCCGGGCAGCAAGACGTCGAGTGATGACACGCCCGTATCTATAGAC ATCTTTCAGTCCTCGGCGAGGCCACAAGACGAAAATGACCAGCACGACTACCCAGTAGAAGCGATTGAGAGAATA TATAGGAAACTAGACTGGAGAATCATACCGCCATTCTGGATCCTTTACTTCCTCTGCTCTGCCATACGCTCAAAC ATTGGCATCGCCCAGACCATGAACCGAGACCAGAAGCACAATCTTGGCACGGTGCTTGGCCTCTCCTCACGCGAT GTCTCTACCGCTCTCGCCCTCTTCTACGTCTCGTACGTGGTCTTTGACTTTCCCTCAAACCTCGTGATGAGCAAG CTGAGCCCGAGGGTATGGATGGCCCGCATCGTCTTTGCCACTGGGCTAGTAGGGGCATGCTTTGCTGCCATTGAA CATGCCTGGAGTCTCAAGCTCCTGCGCTTCCTCCTCGGGCTCGTCGTGGCAGGCGTGTGGCCTGGCATGGCCTTT TACCTGACTCTTTTTTATCCGCCCTCGCGCACTGGCAAGCGCATTGGCATGTACTTTACTGCTGCTCAAGTATCG GCCGCCGTTGCGAGCTTGGTCTCGGCCGCCTTCCAGCTCATGGACGGGGTCGGAGGACTGACGGGCTTCCGCTGG ATGTTCTTGGTATACGGCTTGGTGACCATTGTCCTGAGCTTTGTCTTGCTATGGTGGCTTCCCGAGCAGCCGCTT GCGCCCAATCAAGAGCGCCAGGTGTCGGCTTGGCTGAGATGGTTGCCTGCAACGCCAGAGCCTCTGACGGGTCGC GATGCCGTCATGCACTATCACGATCTGACGCGCGTCTACAATGCTCGGCCCTGGACATTGAAAGATCTAGGCTGG ACTATGCTAGACTGGCGCCTGTGGCCACTGTGTCTCATGTACTTTGGCGTGGTTGGTGTGGGAATCGGCACGCAG CTTTACGGCACCGTCATCATTGCAGCCATTCGGCCGCAAGCAAGCGACATCCAAGTGTCATTGTTGTTTGCACCT GTATGGATTATGGACCTGATTGCCATTCTGATACTTGTACCCATTTCAGATCGCTTCCACCATCATCGCGCCTTT TTTTTTGCAGGTGCCGCCTGCGTGCAGATTGCAGGGCTTTTGACCATGACATTTGCCGTTGACAACGGCTGGGCG CGCTATGGAGGGATGCTTATGGTGGGCTTTGGACTGGGGCCTACTGTGCCAACCTGCATGGCCTGGACCTCTGAA GTATTCCAGCGTCGCCACGGTCAAGTCGGAGTAGCTGCCGCAACAGCGCTTGTGTCTGGGCTGGGCAACATGGGC AGCGTGACGACGACGTATGCGCTATATACCGGCTGGGCCGAGGACGCGAAACCGGGCAAGCACCAGTTCCGCATG AGCAACTTGACAATGATTGGCATTCTGGCAATGAGCATAGCCAGTGCCCTGGTCATGAAGGCTTTGCTTAGTATA GTTGGCAACGAGCCGAGTTCGAGGCTGGGTAAAGCCGGCGCCATTGAAGACGGCGCAGCTCGGCGAGAAGTGCAG CAACGGGGTTTTGAGAATCTTGGCCGACGCGGAAGAAATCAAGTAAGCTAG |
| Transcript | >OphauG2|4203 ATGAATCCATCCGCTCAGGTGCTGGCCAAGCCGGGCAGCAAGACGTCGAGTGATGACACGCCCGTATCTATAGAC ATCTTTCAGTCCTCGGCGAGGCCACAAGACGAAAATGACCAGCACGACTACCCAGTAGAAGCGATTGAGAGAATA TATAGGAAACTAGACTGGAGAATCATACCGCCATTCTGGATCCTTTACTTCCTCTGCTCTGCCATACGCTCAAAC ATTGGCATCGCCCAGACCATGAACCGAGACCAGAAGCACAATCTTGGCACGGTGCTTGGCCTCTCCTCACGCGAT GTCTCTACCGCTCTCGCCCTCTTCTACGTCTCGTACGTGGTCTTTGACTTTCCCTCAAACCTCGTGATGAGCAAG CTGAGCCCGAGGGTATGGATGGCCCGCATCGTCTTTGCCACTGGGCTAGTAGGGGCATGCTTTGCTGCCATTGAA CATGCCTGGAGTCTCAAGCTCCTGCGCTTCCTCCTCGGGCTCGTCGTGGCAGGCGTGTGGCCTGGCATGGCCTTT TACCTGACTCTTTTTTATCCGCCCTCGCGCACTGGCAAGCGCATTGGCATGTACTTTACTGCTGCTCAAGTATCG GCCGCCGTTGCGAGCTTGGTCTCGGCCGCCTTCCAGCTCATGGACGGGGTCGGAGGACTGACGGGCTTCCGCTGG ATGTTCTTGGTATACGGCTTGGTGACCATTGTCCTGAGCTTTGTCTTGCTATGGTGGCTTCCCGAGCAGCCGCTT GCGCCCAATCAAGAGCGCCAGGTGTCGGCTTGGCTGAGATGGTTGCCTGCAACGCCAGAGCCTCTGACGGGTCGC GATGCCGTCATGCACTATCACGATCTGACGCGCGTCTACAATGCTCGGCCCTGGACATTGAAAGATCTAGGCTGG ACTATGCTAGACTGGCGCCTGTGGCCACTGTGTCTCATGTACTTTGGCGTGGTTGGTGTGGGAATCGGCACGCAG CTTTACGGCACCGTCATCATTGCAGCCATTCGGCCGCAAGCAAGCGACATCCAAGTGTCATTGTTGTTTGCACCT GTATGGATTATGGACCTGATTGCCATTCTGATACTTGTACCCATTTCAGATCGCTTCCACCATCATCGCGCCTTT TTTTTTGCAGGTGCCGCCTGCGTGCAGATTGCAGGGCTTTTGACCATGACATTTGCCGTTGACAACGGCTGGGCG CGCTATGGAGGGATGCTTATGGTGGGCTTTGGACTGGGGCCTACTGTGCCAACCTGCATGGCCTGGACCTCTGAA GTATTCCAGCGTCGCCACGGTCAAGTCGGAGTAGCTGCCGCAACAGCGCTTGTGTCTGGGCTGGGCAACATGGGC AGCGTGACGACGACGTATGCGCTATATACCGGCTGGGCCGAGGACGCGAAACCGGGCAAGCACCAGTTCCGCATG AGCAACTTGACAATGATTGGCATTCTGGCAATGAGCATAGCCAGTGCCCTGGTCATGAAGGCTTTGCTTAGTATA GTTGGCAACGAGCCGAGTTCGAGGCTGGGTAAAGCCGGCGCCATTGAAGACGGCGCAGCTCGGCGAGAAGTGCAG CAACGGGGTTTTGAGAATCTTGGCCGACGCGGAAGAAATCAAGTAAGCTAG |
| Gene | >OphauG2|4203 ATGAATCCATCCGCTCAGGTGCTGGCCAAGCCGGGCAGCAAGACGTCGAGTGATGACACGCCCGTATCTATAGAC ATCTTTCAGTCCTCGGCGAGGCCACAAGACGAAAATGACCAGCACGACTACCCAGTAGAAGCGATTGAGAGAATA TATAGGTACGCCCTCAATCCTCTCTCTTCCTCTTGCGCTGCCTGCTAACTTGTGGCAGGAAACTAGACTGGAGAA TCATACCGCGTAGGATTGCCTCGATTTCCCCAAATAGTCCGCGTCGGCTAACGCAGACACCTTGTAGCATTCTGG ATCCTTTACTTCCTCTGCTCTGCCATACGCTCAAACATTGGCATCGCCCAGACCATGAACCGAGACCAGAAGCAC AATCTTGGCACGGTGCTTGGCCTCTCCTCACGCGATGTCTCTACCGCTCTCGCCCTCTTCTACGTCTCGTACGTG GTCTTTGACTTTCCCTCAAACCTCGTGATGAGCAAGCTGAGCCCGAGGGTATGGATGGCCCGCATCGTCTTTGCC ACTGGGCTAGTAGGGGCATGCTTTGCTGCCATTGAACATGCCTGGAGTCTCAAGCTCCTGCGCTTCCTCCTCGGG CTCGTCGTGGCAGGCGTGTGGCCTGGCATGGCCTTTTACCTGACTCTTTTTTATCCGCCCTCGCGCACTGGCAAG CGCATTGGCATGTACTTTACTGCTGCTCAAGTATCGGCCGCCGTTGCGAGCTTGGTCTCGGCCGCCTTCCAGCTC ATGGACGGGGTCGGAGGACTGACGGGCTTCCGCTGGATGTTCTTGGTATACGGCTTGGTGACCATTGTCCTGAGC TTTGTCTTGCTATGGTGGCTTCCCGAGCAGCCGCTTGCGCCCAATCAAGAGCGCCAGGTGTCGGCTTGGCTGAGA TGGTTGCCTGCAACGCCAGAGCCTCTGACGGGTCGCGATGCCGTCATGCACTATCACGATCTGACGCGCGTCTAC AATGCTCGGCCCTGGACATTGAAAGATCTAGGCTGGACTATGCTAGACTGGCGCCTGTGGCCACTGTGTCTCATG TACTTTGGCGTGGTTGGTGTGGGAATCGGCACGCAGCTTTACGGCACCGTCATCATTGCAGCCATTCGGCCGCAA GCAAGCGACATCCAAGTGTCATTGTTGTTTGCACCTGTATGGATTGTGAGTCGTTGCTCATGGTGCATCGCCCCT GTTTAGGCCTCTTCTAATGCTTTGCCAGATGGACCTGATTGCCATTCTGATACTTGTACCCATTTCAGATCGCTT CCACCATCATCGCGCCTTTTTTTTTGCAGGTGCCGCCTGCGTGCAGATTGCAGGGCTTTTGACCATGACATTTGC CGTTGACAACGGCTGGGCGCGCTATGGAGGGATGCTTATGGTGGGCTTTGGACTGGGGCCTACTGTGCCAACCTG CATGGCCTGGACCTCTGAAGTATTCCAGCGTCGCCACGGTCAAGTCGGAGTAGCTGCCGCAACAGCGCTTGTGTC TGGGCTGGGCAACATGGGCAGCGTGACGACGACGTATGCGCTATATACCGGCTGGGCCGAGGACGCGAAACCGGG CAAGCACCAGTTCCGCATGAGCAACTTGACAATGATTGGCATTCTGGCAATGAGCATAGCCAGTGCCCTGGTCAT GAAGGCTTTGCTTAGTATAGTTGGCAACGAGCCGAGTTCGAGGCTGGGTAAAGCCGGCGCCATTGAAGACGGCGC AGCTCGGCGAGAAGTGCAGCAACGGGGTTTTGAGAATCTTGGCCGACGCGGAAGAAATCAAGTAAGCTAG |