Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|4202
Gene name
LocationContig_341:15309..17570
Strand+
Gene length (bp)2261
Transcript length (bp)2142
Coding sequence length (bp)2142
Protein length (aa) 714

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08238 Sel1 Sel1 repeat 1.1E+00 140 173
PF08238 Sel1 Sel1 repeat 8.6E-03 180 215
PF08238 Sel1 Sel1 repeat 7.5E+01 219 248
PF08238 Sel1 Sel1 repeat 3.1E-03 321 351
PF08238 Sel1 Sel1 repeat 1.2E-01 382 411
PF08238 Sel1 Sel1 repeat 2.7E-03 412 446
PF08238 Sel1 Sel1 repeat 5.1E+00 449 482
PF08238 Sel1 Sel1 repeat 1.7E+02 484 499
PF08238 Sel1 Sel1 repeat 8.7E+01 534 551
PF08238 Sel1 Sel1 repeat 2.8E+02 584 602
PF08238 Sel1 Sel1 repeat 2.0E-03 605 632
PF08238 Sel1 Sel1 repeat 4.5E-03 641 668

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UBV2|SE1L1_HUMAN Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3 127 691 3.0E-81
sp|Q9ESM7|SE1L1_MESAU Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1 127 691 2.0E-80
sp|Q80Z70|SE1L1_RAT Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2 127 691 5.0E-80
sp|Q9Z2G6|SE1L1_MOUSE Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=1 SV=2 127 691 9.0E-80
sp|Q5TEA6|SE1L2_HUMAN Protein sel-1 homolog 2 OS=Homo sapiens GN=SEL1L2 PE=1 SV=2 130 691 6.0E-77
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UBV2|SE1L1_HUMAN Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3 127 691 3.0E-81
sp|Q9ESM7|SE1L1_MESAU Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1 127 691 2.0E-80
sp|Q80Z70|SE1L1_RAT Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2 127 691 5.0E-80
sp|Q9Z2G6|SE1L1_MOUSE Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=1 SV=2 127 691 9.0E-80
sp|Q5TEA6|SE1L2_HUMAN Protein sel-1 homolog 2 OS=Homo sapiens GN=SEL1L2 PE=1 SV=2 130 691 6.0E-77
sp|Q3V172|SE1L2_MOUSE Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1 127 691 4.0E-76
sp|Q5XI05|SE1L2_RAT Protein sel-1 homolog 2 OS=Rattus norvegicus GN=Sel1l2 PE=2 SV=1 127 691 4.0E-75
sp|O13875|YE1A_SCHPO Uncharacterized Sel1-like repeat-containing protein C1B3.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.10c PE=3 SV=4 127 691 3.0E-58
sp|Q9LM25|HRD3A_ARATH ERAD-associated E3 ubiquitin-protein ligase component HRD3A OS=Arabidopsis thaliana GN=HRD3A PE=1 SV=1 172 692 4.0E-55
sp|Q10NT7|HRD3_ORYSJ ERAD-associated E3 ubiquitin-protein ligase component HRD3 OS=Oryza sativa subsp. japonica GN=HRD3 PE=2 SV=1 176 696 3.0E-46
sp|Q9C6B6|HRD3B_ARATH ERAD-associated E3 ubiquitin-protein ligase component HRD3B OS=Arabidopsis thaliana GN=HRD3B PE=3 SV=1 176 692 2.0E-43
sp|Q6FNV5|HRD3_CANGA ERAD-associated E3 ubiquitin-protein ligase component HRD3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=HRD3 PE=3 SV=1 134 693 1.0E-41
sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase component HRD3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRD3 PE=1 SV=1 130 713 1.0E-35
sp|Q9USV0|HRD3_SCHPO Putative ERAD-associated E3 ubiquitin-protein ligase component OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC28F2.08c PE=3 SV=1 176 693 2.0E-31
sp|A0A0H2VDN9|ESIB_ECOL6 Secretory immunoglobulin A-binding protein EsiB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=esiB PE=1 SV=1 193 635 4.0E-17
sp|A0A0H2VDN9|ESIB_ECOL6 Secretory immunoglobulin A-binding protein EsiB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=esiB PE=1 SV=1 304 660 2.0E-15
sp|Q68CR1|SE1L3_HUMAN Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 PE=1 SV=2 314 698 3.0E-12
sp|Q80TS8|SE1L3_MOUSE Protein sel-1 homolog 3 OS=Mus musculus GN=Sel1l3 PE=2 SV=3 314 695 2.0E-11
sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ OS=Escherichia coli (strain K12) GN=ybeQ PE=4 SV=2 360 664 1.0E-07
sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ OS=Escherichia coli (strain K12) GN=ybeQ PE=4 SV=2 434 676 1.0E-06
sp|P77296|YBET_ECOLI Uncharacterized protein YbeT OS=Escherichia coli (strain K12) GN=ybeT PE=2 SV=1 313 451 1.0E-06
sp|Q9LM25|HRD3A_ARATH ERAD-associated E3 ubiquitin-protein ligase component HRD3A OS=Arabidopsis thaliana GN=HRD3A PE=1 SV=1 129 560 2.0E-06
sp|P77234|YBEQ_ECOLI Uncharacterized protein YbeQ OS=Escherichia coli (strain K12) GN=ybeQ PE=4 SV=2 176 438 3.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|4202
MKSAAFLGLLLSQVAQVLSTNAQYYHDTHGQTEPTRHGSSHGLGPQEPAQKQSQPVAEQPGAKLVNDALLELHKV
PQSLQRRRRQKSGVVASIFRYIIETIPTGPARAPSQAGQTPKSTASAPLLAAVELLEQAVQYNNSDALYLLAELN
FFGKYGHARNLHAAFGHYHKLASVHGNTTAQYMIALYHSTGVGDVVARDQAKALLYYTFAALRGDTRAEMATGFR
HHSGIGASKSCETAVKYYKRVADKAINWYRSGPPGGMSWVQQAWRIADDHGGIYGEGASVSSSGLNARKASPHSD
AHAAISDVIEYLDLVSQKGDSKASYNLGRIYYDGQRGLPKDFDMAKKYFLLVASRYWKKDNRITEHYSKEIEKLA
GKAAGFIGRMYMRGDGVVQSFERARAWFDRGISLGDAQSQYGRGLMLLNGLGGKENVKLAMEMLTAAAAQDYAPA
QVQMGRLYLDQGGLEDIRIANNHFELAARHGNIEAHYYLAEMSFHGVGREKHCAVAVNYYKNVAEKAEPLVSSWA
DASEAYESGDYDLALVNFLMAAEQGYERAQTNVAYMLDKMWAKVPLAEWFHQRYEGSALLHNPQLALIYWTRSSR
QSNIDALVRMGDYYFYGIGTERDVGKALQCYTGASDYSQSAQALFNLGWMHENGIGMTQDFHLAKRYYDHALAVN
EEAYLPVTLSLLKLRVRSAWNTLTRGPVHSIQDEPSKP*
Coding >OphauG2|4202
ATGAAAAGCGCGGCTTTCTTAGGGCTCCTGCTGTCGCAGGTGGCCCAAGTCTTGTCCACCAACGCGCAATACTAT
CACGATACACACGGGCAAACGGAGCCCACGCGCCATGGCAGCAGTCATGGGCTTGGCCCGCAAGAGCCCGCCCAG
AAGCAAAGCCAGCCCGTGGCAGAGCAGCCAGGAGCTAAGCTCGTAAACGACGCCTTGCTGGAGCTTCACAAGGTT
CCCCAGTCCCTACAGCGCCGACGAAGACAGAAGTCTGGAGTCGTCGCATCCATCTTTCGCTACATCATCGAGACT
ATTCCTACGGGCCCTGCCAGGGCGCCATCACAAGCTGGGCAAACGCCCAAGAGCACGGCCAGTGCGCCTTTACTG
GCTGCTGTTGAGCTGCTGGAGCAGGCTGTCCAATACAACAACTCGGACGCGCTATATCTCCTGGCTGAGCTCAAT
TTCTTTGGCAAATACGGCCATGCTCGCAACCTACACGCTGCCTTTGGCCACTACCACAAGCTGGCAAGCGTGCAC
GGCAACACCACAGCGCAATACATGATTGCCCTCTACCACTCGACTGGCGTAGGCGACGTGGTTGCTCGTGACCAG
GCCAAGGCTTTGCTATACTACACGTTTGCCGCCCTTCGTGGCGATACTCGAGCCGAGATGGCGACGGGGTTTCGA
CACCACAGCGGCATTGGCGCGAGTAAGAGCTGCGAGACTGCTGTCAAGTACTACAAGCGAGTTGCCGACAAGGCC
ATAAACTGGTACCGTTCTGGCCCTCCCGGGGGCATGTCGTGGGTCCAGCAAGCATGGCGCATTGCTGACGACCAC
GGCGGCATCTACGGTGAAGGCGCCAGCGTATCTAGCTCGGGCCTCAACGCACGCAAGGCAAGCCCGCACTCGGAT
GCACACGCCGCTATTAGCGACGTTATCGAGTACCTCGATCTGGTCTCCCAAAAGGGAGACTCCAAGGCGTCATAT
AACCTTGGCAGAATATACTACGACGGCCAGAGAGGCCTTCCAAAAGATTTTGACATGGCCAAGAAGTACTTTTTA
CTTGTAGCTTCGAGGTACTGGAAAAAGGACAACCGCATCACGGAACATTACAGCAAGGAAATCGAGAAGCTGGCA
GGCAAGGCTGCAGGCTTCATTGGCCGCATGTACATGAGGGGAGATGGGGTCGTGCAAAGCTTTGAACGAGCGCGC
GCCTGGTTCGACCGCGGCATATCGCTTGGAGACGCGCAGTCGCAATACGGACGGGGGCTGATGCTTCTCAACGGG
CTCGGGGGCAAGGAAAACGTCAAGCTAGCCATGGAGATGCTCACGGCTGCGGCGGCTCAGGACTACGCACCGGCG
CAGGTGCAGATGGGGCGTCTGTATCTCGATCAAGGCGGGCTCGAGGATATTCGCATCGCCAACAATCACTTTGAG
CTGGCCGCTAGGCACGGCAACATTGAGGCCCACTACTATCTTGCTGAAATGTCTTTTCATGGAGTTGGACGAGAA
AAGCACTGTGCTGTCGCCGTCAACTATTACAAAAACGTGGCTGAAAAGGCTGAGCCCCTGGTCTCGTCGTGGGCC
GATGCCAGCGAGGCGTACGAGTCTGGGGACTACGACCTGGCCCTGGTCAACTTCCTCATGGCTGCCGAGCAGGGC
TACGAGCGGGCGCAGACCAACGTGGCATACATGCTGGACAAGATGTGGGCCAAGGTGCCCCTGGCTGAATGGTTC
CATCAGCGGTACGAGGGCAGCGCTTTGCTGCACAACCCTCAGCTGGCCCTCATCTACTGGACGCGGTCTTCGCGG
CAGTCCAATATTGATGCCTTGGTAAGGATGGGGGATTATTATTTTTATGGCATCGGAACAGAACGGGATGTGGGC
AAGGCGCTGCAGTGCTATACCGGAGCGTCGGACTACTCGCAGAGCGCGCAGGCTCTCTTCAACCTGGGGTGGATG
CACGAGAATGGCATCGGAATGACGCAAGACTTCCACCTGGCTAAGCGCTACTACGACCATGCACTGGCAGTCAAC
GAAGAGGCATACCTGCCCGTGACGCTGAGCCTGTTGAAGCTGCGAGTGCGAAGCGCGTGGAACACGTTGACCCGA
GGCCCAGTGCATTCGATTCAGGACGAGCCAAGTAAGCCGTGA
Transcript >OphauG2|4202
ATGAAAAGCGCGGCTTTCTTAGGGCTCCTGCTGTCGCAGGTGGCCCAAGTCTTGTCCACCAACGCGCAATACTAT
CACGATACACACGGGCAAACGGAGCCCACGCGCCATGGCAGCAGTCATGGGCTTGGCCCGCAAGAGCCCGCCCAG
AAGCAAAGCCAGCCCGTGGCAGAGCAGCCAGGAGCTAAGCTCGTAAACGACGCCTTGCTGGAGCTTCACAAGGTT
CCCCAGTCCCTACAGCGCCGACGAAGACAGAAGTCTGGAGTCGTCGCATCCATCTTTCGCTACATCATCGAGACT
ATTCCTACGGGCCCTGCCAGGGCGCCATCACAAGCTGGGCAAACGCCCAAGAGCACGGCCAGTGCGCCTTTACTG
GCTGCTGTTGAGCTGCTGGAGCAGGCTGTCCAATACAACAACTCGGACGCGCTATATCTCCTGGCTGAGCTCAAT
TTCTTTGGCAAATACGGCCATGCTCGCAACCTACACGCTGCCTTTGGCCACTACCACAAGCTGGCAAGCGTGCAC
GGCAACACCACAGCGCAATACATGATTGCCCTCTACCACTCGACTGGCGTAGGCGACGTGGTTGCTCGTGACCAG
GCCAAGGCTTTGCTATACTACACGTTTGCCGCCCTTCGTGGCGATACTCGAGCCGAGATGGCGACGGGGTTTCGA
CACCACAGCGGCATTGGCGCGAGTAAGAGCTGCGAGACTGCTGTCAAGTACTACAAGCGAGTTGCCGACAAGGCC
ATAAACTGGTACCGTTCTGGCCCTCCCGGGGGCATGTCGTGGGTCCAGCAAGCATGGCGCATTGCTGACGACCAC
GGCGGCATCTACGGTGAAGGCGCCAGCGTATCTAGCTCGGGCCTCAACGCACGCAAGGCAAGCCCGCACTCGGAT
GCACACGCCGCTATTAGCGACGTTATCGAGTACCTCGATCTGGTCTCCCAAAAGGGAGACTCCAAGGCGTCATAT
AACCTTGGCAGAATATACTACGACGGCCAGAGAGGCCTTCCAAAAGATTTTGACATGGCCAAGAAGTACTTTTTA
CTTGTAGCTTCGAGGTACTGGAAAAAGGACAACCGCATCACGGAACATTACAGCAAGGAAATCGAGAAGCTGGCA
GGCAAGGCTGCAGGCTTCATTGGCCGCATGTACATGAGGGGAGATGGGGTCGTGCAAAGCTTTGAACGAGCGCGC
GCCTGGTTCGACCGCGGCATATCGCTTGGAGACGCGCAGTCGCAATACGGACGGGGGCTGATGCTTCTCAACGGG
CTCGGGGGCAAGGAAAACGTCAAGCTAGCCATGGAGATGCTCACGGCTGCGGCGGCTCAGGACTACGCACCGGCG
CAGGTGCAGATGGGGCGTCTGTATCTCGATCAAGGCGGGCTCGAGGATATTCGCATCGCCAACAATCACTTTGAG
CTGGCCGCTAGGCACGGCAACATTGAGGCCCACTACTATCTTGCTGAAATGTCTTTTCATGGAGTTGGACGAGAA
AAGCACTGTGCTGTCGCCGTCAACTATTACAAAAACGTGGCTGAAAAGGCTGAGCCCCTGGTCTCGTCGTGGGCC
GATGCCAGCGAGGCGTACGAGTCTGGGGACTACGACCTGGCCCTGGTCAACTTCCTCATGGCTGCCGAGCAGGGC
TACGAGCGGGCGCAGACCAACGTGGCATACATGCTGGACAAGATGTGGGCCAAGGTGCCCCTGGCTGAATGGTTC
CATCAGCGGTACGAGGGCAGCGCTTTGCTGCACAACCCTCAGCTGGCCCTCATCTACTGGACGCGGTCTTCGCGG
CAGTCCAATATTGATGCCTTGGTAAGGATGGGGGATTATTATTTTTATGGCATCGGAACAGAACGGGATGTGGGC
AAGGCGCTGCAGTGCTATACCGGAGCGTCGGACTACTCGCAGAGCGCGCAGGCTCTCTTCAACCTGGGGTGGATG
CACGAGAATGGCATCGGAATGACGCAAGACTTCCACCTGGCTAAGCGCTACTACGACCATGCACTGGCAGTCAAC
GAAGAGGCATACCTGCCCGTGACGCTGAGCCTGTTGAAGCTGCGAGTGCGAAGCGCGTGGAACACGTTGACCCGA
GGCCCAGTGCATTCGATTCAGGACGAGCCAAGTAAGCCGTGA
Gene >OphauG2|4202
ATGAAAAGCGCGGCTTTCTTAGGGCTCCGTCAGTAGTCCCTGTCTTGCTTGGCCATGGCAGCTTGCGTCTTGCTC
ACATGCATCCAGTGCTGTCGCAGGTGGCCCAAGTCTTGTCCACCAACGCGCAATACTATCACGATACACACGGGC
AAACGGAGCCCACGCGCCATGGCAGCAGTCATGGGCTTGGCCCGCAAGAGCCCGCCCAGAAGCAAAGCCAGCCCG
TGGCAGAGCAGCCAGGTTTGCACCTCGCGCCTCTGGGCAATGGAACCTCGGTGGCATGCAACTGATGACGTCCAG
GAGCTAAGCTCGTAAACGACGCCTTGCTGGAGCTTCACAAGGTTCCCCAGTCCCTACAGCGCCGACGAAGACAGA
AGTCTGGAGTCGTCGCATCCATCTTTCGCTACATCATCGAGACTATTCCTACGGGCCCTGCCAGGGCGCCATCAC
AAGCTGGGCAAACGCCCAAGAGCACGGCCAGTGCGCCTTTACTGGCTGCTGTTGAGCTGCTGGAGCAGGCTGTCC
AATACAACAACTCGGACGCGCTATATCTCCTGGCTGAGCTCAATTTCTTTGGCAAATACGGCCATGCTCGCAACC
TACACGCTGCCTTTGGCCACTACCACAAGCTGGCAAGCGTGCACGGCAACACCACAGCGCAATACATGATTGCCC
TCTACCACTCGACTGGCGTAGGCGACGTGGTTGCTCGTGACCAGGCCAAGGCTTTGCTATACTACACGTTTGCCG
CCCTTCGTGGCGATACTCGAGCCGAGATGGCGACGGGGTTTCGACACCACAGCGGCATTGGCGCGAGTAAGAGCT
GCGAGACTGCTGTCAAGTACTACAAGCGAGTTGCCGACAAGGCCATAAACTGGTACCGTTCTGGCCCTCCCGGGG
GCATGTCGTGGGTCCAGCAAGCATGGCGCATTGCTGACGACCACGGCGGCATCTACGGTGAAGGCGCCAGCGTAT
CTAGCTCGGGCCTCAACGCACGCAAGGCAAGCCCGCACTCGGATGCACACGCCGCTATTAGCGACGTTATCGAGT
ACCTCGATCTGGTCTCCCAAAAGGGAGACTCCAAGGCGTCATATAACCTTGGCAGAATATACTACGACGGCCAGA
GAGGCCTTCCAAAAGATTTTGACATGGCCAAGAAGTACTTTTTACTTGTAGCTTCGAGGTACTGGAAAAAGGACA
ACCGCATCACGGAACATTACAGCAAGGAAATCGAGAAGCTGGCAGGCAAGGCTGCAGGCTTCATTGGCCGCATGT
ACATGAGGGGAGATGGGGTCGTGCAAAGCTTTGAACGAGCGCGCGCCTGGTTCGACCGCGGCATATCGCTTGGAG
ACGCGCAGTCGCAATACGGACGGGGGCTGATGCTTCTCAACGGGCTCGGGGGCAAGGAAAACGTCAAGCTAGCCA
TGGAGATGCTCACGGCTGCGGCGGCTCAGGACTACGCACCGGCGCAGGTGCAGATGGGGCGTCTGTATCTCGATC
AAGGCGGGCTCGAGGATATTCGCATCGCCAACAATCACTTTGAGCTGGCCGCTAGGCACGGCAACATTGAGGCCC
ACTACTATCTTGCTGAAATGTCTTTTCATGGAGTTGGACGAGAAAAGCACTGTGCTGTCGCCGTCAACTATTACA
AAAACGTGGCTGAAAAGGCTGAGCCCCTGGTCTCGTCGTGGGCCGATGCCAGCGAGGCGTACGAGTCTGGGGACT
ACGACCTGGCCCTGGTCAACTTCCTCATGGCTGCCGAGCAGGGCTACGAGCGGGCGCAGACCAACGTGGCATACA
TGCTGGACAAGATGTGGGCCAAGGTGCCCCTGGCTGAATGGTTCCATCAGCGGTACGAGGGCAGCGCTTTGCTGC
ACAACCCTCAGCTGGCCCTCATCTACTGGACGCGGTCTTCGCGGCAGTCCAATATTGATGCCTTGGTAAGGATGG
GGGATTATTATTTTTATGGCATCGGAACAGAACGGGATGTGGGCAAGGCGCTGCAGTGCTATACCGGAGCGTCGG
ACTACTCGCAGAGCGCGCAGGCTCTCTTCAACCTGGGGTGGATGCACGAGAATGGCATCGGAATGACGCAAGACT
TCCACCTGGCTAAGCGCTACTACGACCATGCACTGGCAGTCAACGAAGAGGCATACCTGCCCGTGACGCTGAGCC
TGTTGAAGCTGCGAGTGCGAAGCGCGTGGAACACGTTGACCCGAGGCCCAGTGCATTCGATTCAGGACGAGCCAA
GTAAGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail