Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4128
Gene name
Location	Contig_333:4253..4884
Strand	+
Gene length (bp)	631
Transcript length (bp)	504
Coding sequence length (bp)	504
Protein length (aa)	168

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01284	MARVEL	Membrane-associating domain	9.2E-14	12	136

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	12	34	22
2	47	69	22
3	78	100	22
4	120	142	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4128 MGLARGGLRMLASANHFLIFLSALIVTGILSYFLHKFPHGNTHNTHLIFQEVVAVITFVIYLVGMVLPFMDNYHG HMVPLNLILSYLWLTSFIFSAQDWSGHRCRSTYPAAGLCGRKHTVEAFNFLAFFFLLANVLTEGLIWRARRTDGI VSKNHHHTTSTTGPPVV*
Coding	>OphauG2\|4128 ATGGGTCTCGCACGCGGAGGACTGCGCATGCTCGCCTCGGCGAACCACTTCCTCATCTTCCTCTCCGCCCTCATC GTCACAGGCATCCTTTCCTACTTTTTACACAAATTCCCCCACGGCAACACCCACAACACCCATCTCATCTTCCAA GAAGTCGTTGCCGTCATCACCTTTGTCATCTACCTTGTCGGCATGGTCCTTCCCTTCATGGACAACTATCACGGC CACATGGTGCCGCTCAACCTGATTCTATCCTATCTGTGGCTCACCTCCTTCATCTTCTCCGCCCAAGACTGGAGC GGCCATCGCTGCCGCTCCACATACCCAGCTGCGGGCCTATGCGGCAGAAAGCACACCGTCGAGGCCTTTAACTTT CTTGCCTTCTTCTTCCTCCTTGCCAATGTCCTCACCGAAGGCTTGATCTGGAGAGCACGCCGCACCGACGGCATC GTCTCCAAGAACCATCACCACACGACGTCAACCACGGGGCCACCTGTTGTCTAA
Transcript	>OphauG2\|4128 ATGGGTCTCGCACGCGGAGGACTGCGCATGCTCGCCTCGGCGAACCACTTCCTCATCTTCCTCTCCGCCCTCATC GTCACAGGCATCCTTTCCTACTTTTTACACAAATTCCCCCACGGCAACACCCACAACACCCATCTCATCTTCCAA GAAGTCGTTGCCGTCATCACCTTTGTCATCTACCTTGTCGGCATGGTCCTTCCCTTCATGGACAACTATCACGGC CACATGGTGCCGCTCAACCTGATTCTATCCTATCTGTGGCTCACCTCCTTCATCTTCTCCGCCCAAGACTGGAGC GGCCATCGCTGCCGCTCCACATACCCAGCTGCGGGCCTATGCGGCAGAAAGCACACCGTCGAGGCCTTTAACTTT CTTGCCTTCTTCTTCCTCCTTGCCAATGTCCTCACCGAAGGCTTGATCTGGAGAGCACGCCGCACCGACGGCATC GTCTCCAAGAACCATCACCACACGACGTCAACCACGGGGCCACCTGTTGTCTAA
Gene	>OphauG2\|4128 ATGGGTCTCGCACGCGGAGGACTGCGCATGCTCGCCTCGGCGAACCACTTCCTCATCTTCCTCTCCGCCCTCATC GTCACAGGCATCCTTTCCTACTTTTTACACAAATTCCCCCACGGCAACACCCACAACACCCATCTCATCTTCCAA GAAGTCGTTGTAAGCTTCTCCCGCTACCAAATCTTCACTCCAAGCAGCCGACTGACACTCACCTCCATAGGCCGT CATCACCTTTGTCATCTACCTTGTCGGCATGGTCCTTCCCTTCATGGACAACTATCACGGCCACATGGTGCCGCT CAACCTGATTCTATCCTATCTGTGGCTCACCTCCTTCATCTTCTCCGCCCAAGACTGGAGCGGCCATCGCTGCCG CTCCACATACCCAGCTGCGGGCCTATGCGGCAGAAAGCACACCGTCGAGGCCTTTAACTTTCTTGCCTTGTACGT GTTTAAGATATACGACATGTTTGTCTGTCGAGAGATATTCGGCTGATACAAGTGCTGCAGCTTCTTCCTCCTTGC CAATGTCCTCACCGAAGGCTTGATCTGGAGAGCACGCCGCACCGACGGCATCGTCTCCAAGAACCATCACCACAC GACGTCAACCACGGGGCCACCTGTTGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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