© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|4077 |
| Gene name | |
| Location | Contig_328:15824..16811 |
| Strand | - |
| Gene length (bp) | 987 |
| Transcript length (bp) | 987 |
| Coding sequence length (bp) | 987 |
| Protein length (aa) | 329 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04488 | Gly_transf_sug | Glycosyltransferase sugar-binding region containing DXD motif | 1.0E-08 | 87 | 156 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14084|IMT1_SCHPO | Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 | 47 | 279 | 9.0E-24 |
| sp|Q9UT67|IMT2_SCHPO | Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 | 21 | 302 | 1.0E-19 |
| sp|Q10323|IMT3_SCHPO | Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 | 52 | 282 | 6.0E-19 |
| sp|P33300|SUR1_YEAST | Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 | 62 | 294 | 9.0E-17 |
| sp|P38287|CSH1_YEAST | Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 | 62 | 294 | 1.0E-15 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 29 | 19 |
| 2 | 219 | 241 | 22 |
| 3 | 283 | 305 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4077 MAFGPGLKRLFVAAIVLITILVVSHQLSYTRGVLSEGQLRESVELIKRCEPRRLESSDQDRIPNIIHQVWKTSNV STYSSEIEASYDSWKKSLEPLNYTVKLWTDNDVLGLVESKYSWLLSTYQGYSHNIQRADIARVVIVHAQGGIYAD LDVTPTSVSKIECLQRLGMQAIFAPTGGNAGVSNHFFMAKRASPFLQSVLEEAKQRGGATSRRILLPYLQVFWST GPIMVTAALYKYVWLFGGTKHDLGLLDEEYTWDVVAHVAGRSWHGTDGQALNYIGDHVRVMVTLVGVVFVAMTVV FLCFVRVRHGQSIGILTLNSYITRWRMI* |
| Coding | >OphauG2|4077 ATGGCCTTTGGACCAGGGTTGAAAAGGCTTTTTGTGGCTGCTATTGTTTTAATCACTATTCTTGTGGTTTCCCAT CAACTGAGTTATACGCGAGGCGTTTTGAGCGAAGGACAACTACGCGAGTCGGTTGAATTAATCAAGCGATGCGAA CCCAGGCGACTTGAATCATCAGACCAGGATAGAATACCCAACATTATTCACCAAGTATGGAAGACCAGCAACGTG TCAACATACTCTAGCGAAATAGAAGCATCGTACGACTCGTGGAAGAAAAGCTTGGAACCCTTGAACTACACAGTC AAGCTCTGGACAGACAACGACGTGCTGGGGCTGGTAGAGTCCAAATACAGCTGGCTACTGTCAACATACCAAGGC TATTCGCACAACATCCAACGAGCCGACATTGCGCGGGTGGTGATTGTACACGCCCAAGGAGGGATATATGCCGAT CTCGACGTCACGCCCACCTCGGTGTCGAAAATCGAGTGTCTGCAACGGCTGGGGATGCAAGCCATCTTTGCGCCG ACGGGCGGCAACGCAGGCGTGAGCAACCACTTTTTCATGGCCAAGCGCGCATCGCCTTTCCTGCAGTCGGTTCTT GAAGAAGCCAAGCAACGAGGCGGGGCGACGTCGCGACGCATTCTGCTGCCCTACCTGCAGGTGTTTTGGTCGACG GGCCCAATCATGGTGACTGCGGCGCTGTATAAATACGTGTGGCTGTTTGGAGGCACGAAACACGACTTGGGGCTG CTGGACGAGGAGTATACGTGGGACGTGGTTGCACACGTGGCAGGCAGGTCATGGCATGGCACCGACGGGCAAGCG TTGAATTATATCGGAGACCATGTGCGGGTCATGGTGACTCTGGTGGGCGTGGTGTTTGTGGCCATGACGGTGGTT TTTTTGTGTTTTGTGAGAGTGCGGCACGGCCAATCCATTGGCATTTTGACGCTCAACAGCTACATTACGAGATGG CGCATGATTTGA |
| Transcript | >OphauG2|4077 ATGGCCTTTGGACCAGGGTTGAAAAGGCTTTTTGTGGCTGCTATTGTTTTAATCACTATTCTTGTGGTTTCCCAT CAACTGAGTTATACGCGAGGCGTTTTGAGCGAAGGACAACTACGCGAGTCGGTTGAATTAATCAAGCGATGCGAA CCCAGGCGACTTGAATCATCAGACCAGGATAGAATACCCAACATTATTCACCAAGTATGGAAGACCAGCAACGTG TCAACATACTCTAGCGAAATAGAAGCATCGTACGACTCGTGGAAGAAAAGCTTGGAACCCTTGAACTACACAGTC AAGCTCTGGACAGACAACGACGTGCTGGGGCTGGTAGAGTCCAAATACAGCTGGCTACTGTCAACATACCAAGGC TATTCGCACAACATCCAACGAGCCGACATTGCGCGGGTGGTGATTGTACACGCCCAAGGAGGGATATATGCCGAT CTCGACGTCACGCCCACCTCGGTGTCGAAAATCGAGTGTCTGCAACGGCTGGGGATGCAAGCCATCTTTGCGCCG ACGGGCGGCAACGCAGGCGTGAGCAACCACTTTTTCATGGCCAAGCGCGCATCGCCTTTCCTGCAGTCGGTTCTT GAAGAAGCCAAGCAACGAGGCGGGGCGACGTCGCGACGCATTCTGCTGCCCTACCTGCAGGTGTTTTGGTCGACG GGCCCAATCATGGTGACTGCGGCGCTGTATAAATACGTGTGGCTGTTTGGAGGCACGAAACACGACTTGGGGCTG CTGGACGAGGAGTATACGTGGGACGTGGTTGCACACGTGGCAGGCAGGTCATGGCATGGCACCGACGGGCAAGCG TTGAATTATATCGGAGACCATGTGCGGGTCATGGTGACTCTGGTGGGCGTGGTGTTTGTGGCCATGACGGTGGTT TTTTTGTGTTTTGTGAGAGTGCGGCACGGCCAATCCATTGGCATTTTGACGCTCAACAGCTACATTACGAGATGG CGCATGATTTGA |
| Gene | >OphauG2|4077 ATGGCCTTTGGACCAGGGTTGAAAAGGCTTTTTGTGGCTGCTATTGTTTTAATCACTATTCTTGTGGTTTCCCAT CAACTGAGTTATACGCGAGGCGTTTTGAGCGAAGGACAACTACGCGAGTCGGTTGAATTAATCAAGCGATGCGAA CCCAGGCGACTTGAATCATCAGACCAGGATAGAATACCCAACATTATTCACCAAGTATGGAAGACCAGCAACGTG TCAACATACTCTAGCGAAATAGAAGCATCGTACGACTCGTGGAAGAAAAGCTTGGAACCCTTGAACTACACAGTC AAGCTCTGGACAGACAACGACGTGCTGGGGCTGGTAGAGTCCAAATACAGCTGGCTACTGTCAACATACCAAGGC TATTCGCACAACATCCAACGAGCCGACATTGCGCGGGTGGTGATTGTACACGCCCAAGGAGGGATATATGCCGAT CTCGACGTCACGCCCACCTCGGTGTCGAAAATCGAGTGTCTGCAACGGCTGGGGATGCAAGCCATCTTTGCGCCG ACGGGCGGCAACGCAGGCGTGAGCAACCACTTTTTCATGGCCAAGCGCGCATCGCCTTTCCTGCAGTCGGTTCTT GAAGAAGCCAAGCAACGAGGCGGGGCGACGTCGCGACGCATTCTGCTGCCCTACCTGCAGGTGTTTTGGTCGACG GGCCCAATCATGGTGACTGCGGCGCTGTATAAATACGTGTGGCTGTTTGGAGGCACGAAACACGACTTGGGGCTG CTGGACGAGGAGTATACGTGGGACGTGGTTGCACACGTGGCAGGCAGGTCATGGCATGGCACCGACGGGCAAGCG TTGAATTATATCGGAGACCATGTGCGGGTCATGGTGACTCTGGTGGGCGTGGTGTTTGTGGCCATGACGGTGGTT TTTTTGTGTTTTGTGAGAGTGCGGCACGGCCAATCCATTGGCATTTTGACGCTCAACAGCTACATTACGAGATGG CGCATGATTTGA |