© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4068 |
| Gene name | |
| Location | Contig_327:3122..3848 |
| Strand | + |
| Gene length (bp) | 726 |
| Transcript length (bp) | 618 |
| Coding sequence length (bp) | 618 |
| Protein length (aa) | 206 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04117 | Mpv17_PMP22 | Mpv17 / PMP22 family | 7.0E-16 | 138 | 199 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54GD8|PX24C_DICDI | PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1 | 115 | 204 | 3.0E-12 |
| sp|Q9V492|MPV17_DROME | Mpv17-like protein OS=Drosophila melanogaster GN=CG11077 PE=2 SV=1 | 111 | 201 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 118 | 140 | 22 |
| 2 | 147 | 169 | 22 |
| 3 | 184 | 203 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4068 MPSPMAVATLQASGLSVASNLAAQVIEAHNTTRPLGLDVRQLLRFLILTLLTAPPNYLWQHLLERKLPAYPLAHP LGLPTSHAAIEMSVLEQGGATADGPASHVAPVFSWRNTVAKCFIDCITLGAFANTLAFLLIMGLLKAQPRALIWH NIATETLPIILAGYKIWPIASLISFTFVPVQRRIVWLSTIGFVWGIYMSLVASRV* |
| Coding | >OphauG2|4068 ATGCCGTCGCCAATGGCCGTTGCGACGCTGCAGGCTTCCGGCCTGTCCGTGGCGTCGAATCTTGCGGCCCAAGTG ATTGAAGCGCACAACACCACGCGCCCGCTGGGCCTCGACGTGCGCCAGCTGCTTCGCTTCCTTATCCTGACGCTG CTTACCGCGCCGCCCAATTACCTCTGGCAGCACCTCCTCGAGCGCAAACTGCCCGCCTATCCCCTCGCCCATCCC CTCGGCCTGCCCACGAGCCACGCCGCCATTGAAATGAGCGTGCTGGAGCAGGGCGGCGCCACAGCCGACGGCCCT GCGTCGCATGTGGCTCCCGTCTTCAGCTGGCGCAACACAGTGGCCAAGTGCTTCATCGACTGCATCACCCTGGGC GCCTTTGCCAACACGCTTGCATTTCTCCTCATCATGGGCCTGCTCAAGGCCCAGCCACGCGCCCTCATCTGGCAC AACATTGCCACTGAAACACTGCCCATCATCCTGGCCGGCTACAAGATTTGGCCCATTGCCTCGCTCATTAGCTTT ACCTTTGTCCCCGTCCAGCGCCGCATCGTCTGGCTGAGTACCATTGGCTTTGTCTGGGGCATCTATATGAGCCTG GTTGCATCGCGTGTCTAG |
| Transcript | >OphauG2|4068 ATGCCGTCGCCAATGGCCGTTGCGACGCTGCAGGCTTCCGGCCTGTCCGTGGCGTCGAATCTTGCGGCCCAAGTG ATTGAAGCGCACAACACCACGCGCCCGCTGGGCCTCGACGTGCGCCAGCTGCTTCGCTTCCTTATCCTGACGCTG CTTACCGCGCCGCCCAATTACCTCTGGCAGCACCTCCTCGAGCGCAAACTGCCCGCCTATCCCCTCGCCCATCCC CTCGGCCTGCCCACGAGCCACGCCGCCATTGAAATGAGCGTGCTGGAGCAGGGCGGCGCCACAGCCGACGGCCCT GCGTCGCATGTGGCTCCCGTCTTCAGCTGGCGCAACACAGTGGCCAAGTGCTTCATCGACTGCATCACCCTGGGC GCCTTTGCCAACACGCTTGCATTTCTCCTCATCATGGGCCTGCTCAAGGCCCAGCCACGCGCCCTCATCTGGCAC AACATTGCCACTGAAACACTGCCCATCATCCTGGCCGGCTACAAGATTTGGCCCATTGCCTCGCTCATTAGCTTT ACCTTTGTCCCCGTCCAGCGCCGCATCGTCTGGCTGAGTACCATTGGCTTTGTCTGGGGCATCTATATGAGCCTG GTTGCATCGCGTGTCTAG |
| Gene | >OphauG2|4068 ATGCCGTCGCCAATGGCCGTTGCGACGCTGCAGGCTTCCGGCCTGTCCGTGGCGTCGAATCTTGCGGCCCAAGTG ATTGAAGCGCACAACACCACGGTAATGTCGATTCCGCCTCGTCTCGTGTCTTGCTACTGACAATGCCACCGTAGC GCCCGCTGGGCCTCGACGTGCGCCAGCTGCTTCGCTTCCTTATCCTGACGCTGCTTACCGCGCCGCCCAATTACC TCTGGCAGCACCTCCTCGAGCGCAAACTGCCCGCCTATCCCCTCGCCCATCCCCTCGGCCTGCCCACGAGCCACG CCGCCATTGAAATGAGCGTGCTGGAGCAGGGCGGCGCCACAGCCGACGGCCCTGCGTCGCATGTGGCTCCCGTCT TCAGCTGGCGCAACACAGTGGCCAAGTGCTTCATCGACTGCATCACCCTGGGCGCCTTTGCCAACACGCTTGCAT TTCTCCTCATCATGGGCCTGCTCAAGGCCCAGCCACGCGCCCTCATCTGGCACAACATTGCCACTGTAAGCCAGC CAAGACGACAATTCCCAAGCTCCAGCTCACCCAGCCACAACGCAGGAAACACTGCCCATCATCCTGGCCGGCTAC AAGATTTGGCCCATTGCCTCGCTCATTAGCTTTACCTTTGTCCCCGTCCAGCGCCGCATCGTCTGGCTGAGTACC ATTGGCTTTGTCTGGGGCATCTATATGAGCCTGGTTGCATCGCGTGTCTAG |