© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|4012 |
| Gene name | |
| Location | Contig_32:1085..3851 |
| Strand | - |
| Gene length (bp) | 2766 |
| Transcript length (bp) | 2766 |
| Coding sequence length (bp) | 2766 |
| Protein length (aa) | 922 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08634 | Pet127 | Mitochondrial protein Pet127 | 5.3E-113 | 414 | 686 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74832|PT127_SCHPO | mRNA degradation protein pet127, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pet127 PE=3 SV=1 | 353 | 703 | 2.0E-80 |
| sp|P32606|PT127_YEAST | Putative mitochondrial translation system component PET127 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET127 PE=1 SV=2 | 362 | 669 | 3.0E-60 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000959 | mitochondrial RNA metabolic process | Yes |
| GO:0005739 | mitochondrion | Yes |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0043226 | organelle | No |
| GO:0044238 | primary metabolic process | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0043229 | intracellular organelle | No |
| GO:0009987 | cellular process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|4012 MLRLNHLSSTFVRAQPSIIIWQKNRRLATTRLYRQESAAQQSPIEQPPTHQVEILNDSKQKQEAEQTSNQAENSS QQPDRTKITLEEQNRTSATSKPQSNDGNKPQKHIPRENVIAQPKKGSKQEQNPNRRLPRPGALILNRRCTQNKIP QAKGPRRVRRRVPNNPGAARDSPDKYASYHEQLWNRSSIDLGEYIDIVKNAKTEVDPVIKAWIQLLKKSESFGKR GALIKETPVLKSTPDLNTTSNQDQERTLSTVGSSPDDTSTHLSNSPCSHSDQAPLEQDTLKVEITQDSSSSQDAP LNKSSPEGTSSDHVSHQTVKTSRAKAKTAKNLESINNPSSIRIETIDPSKLEFTALEESDVEKVPFLQYDLDRVL FQCGVQQMQDERTGVFNFDPYLATIMPTNEFDFDALKEYVTSSKDDKLRGLASNHGTKYCGSTSSMTAILSHFHY LISAWRLPNFGHVSRSVSLENENFTIITRAPAAAYLAYKDGVYAIDADKQFDTENVLSMLGKSMEKLLTLPKDDY EKYRRTKSHTLPQELREASETYHYSKMGDLLMRSQLDAKDPRLPGAGIFDLKTRAVVSIRMDVRGYKKGVGYEIR KQFGEWQSFEREYFDMIRAAFLKYSLQVRMGRMDGIFVAFHNTQRIFGFQYYALKDMDWALHGTHDPRLGDQEFL LSLKLLNHLMNIATQRFPGRTLRIHVETRPVRATTLNFFAEPISDEQMHKNQQSCKPLVEQLENEIRGLTPNKYE TQGQPKNSEDKKSTKQPDSGGSVTDQESFERAMEAALQSAQAKEGKGGKMDEDDVSELLGLSVSLRNHVNGSFVR RPVIEDEDSPFNWKIQYVVNELSDDEAQTLYKATKKRRRTVFTKTPDEASRAWQKMFKGQLRLMTEEGTRHRKRM TQLYQNEAVRVAWNMDPLPKS* |
| Coding | >OphauG2|4012 ATGTTACGACTTAATCATCTTTCGAGCACTTTCGTCCGCGCCCAACCTTCCATCATCATCTGGCAAAAAAACAGA CGTCTTGCGACCACCCGGCTATATCGACAAGAGAGCGCGGCACAGCAAAGCCCAATCGAACAGCCACCTACACAC CAGGTCGAGATTCTAAATGACTCGAAACAGAAGCAAGAAGCAGAACAAACGTCAAATCAAGCAGAGAATTCATCG CAACAGCCAGACAGAACAAAAATCACATTAGAGGAACAGAACAGAACATCAGCCACTTCAAAGCCGCAGAGCAAC GATGGAAATAAACCACAGAAACATATTCCTAGAGAAAATGTAATCGCACAGCCGAAGAAAGGCTCGAAGCAGGAG CAGAATCCAAATAGAAGACTACCAAGGCCGGGGGCTTTGATATTAAATCGAAGGTGCACACAAAACAAAATTCCA CAAGCCAAAGGGCCCCGGAGGGTACGCCGCAGGGTGCCCAACAATCCCGGAGCAGCGCGCGATTCGCCAGACAAA TATGCCTCTTACCATGAACAATTATGGAACCGGAGCAGCATAGACCTGGGCGAGTACATTGACATCGTTAAAAAC GCAAAAACTGAAGTCGATCCTGTCATAAAGGCTTGGATACAGCTGCTCAAAAAATCCGAATCATTTGGCAAACGT GGCGCTCTGATAAAAGAGACTCCAGTTTTGAAGAGCACGCCAGACTTGAATACTACATCAAACCAGGATCAAGAG AGGACTTTGTCCACTGTCGGTTCTTCACCCGATGATACTAGCACACATTTGTCCAATTCGCCATGCTCTCACTCC GACCAAGCGCCCCTGGAACAAGATACCTTAAAGGTCGAAATTACACAAGACTCATCTTCTAGCCAGGATGCGCCT TTGAACAAAAGCTCCCCCGAGGGTACCTCATCTGATCATGTTTCTCATCAGACTGTGAAAACAAGTCGAGCTAAA GCCAAAACCGCCAAGAATCTCGAATCTATAAACAATCCATCATCAATTAGAATCGAGACAATCGATCCCTCGAAA TTAGAATTTACTGCTCTTGAGGAATCTGATGTCGAGAAAGTGCCATTTCTTCAATACGATCTGGACCGTGTTCTG TTCCAATGCGGCGTACAGCAAATGCAGGATGAACGCACTGGCGTCTTCAACTTCGATCCGTACTTGGCAACCATT ATGCCCACTAATGAATTCGACTTTGACGCTCTCAAGGAATATGTTACGTCTTCCAAGGATGACAAGTTGCGGGGT CTCGCATCTAACCACGGCACCAAGTATTGTGGCTCAACATCAAGCATGACGGCTATTCTCTCTCACTTTCACTAT CTCATTTCCGCATGGAGGCTCCCCAATTTTGGACATGTGTCTCGCTCAGTCTCGCTTGAGAATGAGAATTTCACC ATCATCACTCGTGCGCCCGCGGCTGCCTATCTAGCCTATAAAGATGGGGTTTATGCCATCGATGCGGATAAGCAA TTTGACACGGAAAATGTTCTTAGCATGCTTGGCAAATCAATGGAAAAACTCTTGACGCTCCCAAAGGACGATTAT GAGAAATATCGGCGGACAAAGTCACATACGCTACCCCAAGAGCTGCGAGAGGCATCAGAAACATACCATTACTCG AAGATGGGCGACTTGCTGATGCGGTCACAACTTGATGCCAAAGACCCCCGTCTGCCGGGCGCCGGCATTTTCGAT CTCAAAACCAGGGCGGTCGTGTCTATTCGGATGGATGTGCGAGGCTACAAGAAGGGCGTGGGCTATGAAATCCGC AAACAGTTTGGCGAGTGGCAGTCGTTTGAGCGCGAGTATTTTGACATGATCCGAGCCGCTTTTCTCAAGTACTCA TTGCAGGTCCGTATGGGACGCATGGACGGCATATTCGTTGCCTTTCACAACACGCAGCGTATTTTTGGCTTCCAA TACTATGCTCTGAAGGACATGGACTGGGCCCTTCACGGCACACATGATCCACGGCTTGGCGACCAGGAGTTTTTG TTGAGCCTCAAACTTTTGAACCATTTGATGAACATTGCAACACAGCGTTTTCCTGGCCGAACGCTGCGTATCCAT GTGGAAACGCGGCCGGTTCGCGCAACCACGTTGAACTTCTTTGCCGAGCCAATCAGCGATGAACAGATGCATAAG AACCAGCAATCTTGCAAACCACTTGTTGAGCAATTGGAGAATGAGATTCGTGGGCTGACTCCCAACAAATATGAG ACGCAAGGACAACCCAAAAATAGTGAGGATAAGAAGTCGACCAAGCAGCCAGACAGCGGCGGTTCAGTGACGGAC CAAGAGTCTTTTGAAAGGGCTATGGAAGCGGCTTTGCAGAGCGCTCAGGCAAAAGAGGGTAAAGGCGGGAAGATG GATGAAGACGATGTGTCAGAGCTGTTGGGCCTTTCCGTCTCACTCCGAAACCATGTGAACGGTAGCTTTGTCCGC CGGCCAGTCATTGAAGATGAGGATTCTCCGTTTAATTGGAAAATCCAGTACGTCGTGAACGAACTCTCAGACGAC GAGGCTCAAACCTTGTACAAAGCAACCAAGAAGCGGAGACGAACTGTGTTCACCAAGACCCCTGATGAAGCATCA AGAGCGTGGCAGAAGATGTTCAAGGGACAGCTGCGACTCATGACAGAGGAGGGGACGCGACACAGGAAGCGCATG ACGCAGCTATACCAAAATGAGGCTGTTCGTGTGGCCTGGAATATGGATCCACTGCCCAAATCATGA |
| Transcript | >OphauG2|4012 ATGTTACGACTTAATCATCTTTCGAGCACTTTCGTCCGCGCCCAACCTTCCATCATCATCTGGCAAAAAAACAGA CGTCTTGCGACCACCCGGCTATATCGACAAGAGAGCGCGGCACAGCAAAGCCCAATCGAACAGCCACCTACACAC CAGGTCGAGATTCTAAATGACTCGAAACAGAAGCAAGAAGCAGAACAAACGTCAAATCAAGCAGAGAATTCATCG CAACAGCCAGACAGAACAAAAATCACATTAGAGGAACAGAACAGAACATCAGCCACTTCAAAGCCGCAGAGCAAC GATGGAAATAAACCACAGAAACATATTCCTAGAGAAAATGTAATCGCACAGCCGAAGAAAGGCTCGAAGCAGGAG CAGAATCCAAATAGAAGACTACCAAGGCCGGGGGCTTTGATATTAAATCGAAGGTGCACACAAAACAAAATTCCA CAAGCCAAAGGGCCCCGGAGGGTACGCCGCAGGGTGCCCAACAATCCCGGAGCAGCGCGCGATTCGCCAGACAAA TATGCCTCTTACCATGAACAATTATGGAACCGGAGCAGCATAGACCTGGGCGAGTACATTGACATCGTTAAAAAC GCAAAAACTGAAGTCGATCCTGTCATAAAGGCTTGGATACAGCTGCTCAAAAAATCCGAATCATTTGGCAAACGT GGCGCTCTGATAAAAGAGACTCCAGTTTTGAAGAGCACGCCAGACTTGAATACTACATCAAACCAGGATCAAGAG AGGACTTTGTCCACTGTCGGTTCTTCACCCGATGATACTAGCACACATTTGTCCAATTCGCCATGCTCTCACTCC GACCAAGCGCCCCTGGAACAAGATACCTTAAAGGTCGAAATTACACAAGACTCATCTTCTAGCCAGGATGCGCCT TTGAACAAAAGCTCCCCCGAGGGTACCTCATCTGATCATGTTTCTCATCAGACTGTGAAAACAAGTCGAGCTAAA GCCAAAACCGCCAAGAATCTCGAATCTATAAACAATCCATCATCAATTAGAATCGAGACAATCGATCCCTCGAAA TTAGAATTTACTGCTCTTGAGGAATCTGATGTCGAGAAAGTGCCATTTCTTCAATACGATCTGGACCGTGTTCTG TTCCAATGCGGCGTACAGCAAATGCAGGATGAACGCACTGGCGTCTTCAACTTCGATCCGTACTTGGCAACCATT ATGCCCACTAATGAATTCGACTTTGACGCTCTCAAGGAATATGTTACGTCTTCCAAGGATGACAAGTTGCGGGGT CTCGCATCTAACCACGGCACCAAGTATTGTGGCTCAACATCAAGCATGACGGCTATTCTCTCTCACTTTCACTAT CTCATTTCCGCATGGAGGCTCCCCAATTTTGGACATGTGTCTCGCTCAGTCTCGCTTGAGAATGAGAATTTCACC ATCATCACTCGTGCGCCCGCGGCTGCCTATCTAGCCTATAAAGATGGGGTTTATGCCATCGATGCGGATAAGCAA TTTGACACGGAAAATGTTCTTAGCATGCTTGGCAAATCAATGGAAAAACTCTTGACGCTCCCAAAGGACGATTAT GAGAAATATCGGCGGACAAAGTCACATACGCTACCCCAAGAGCTGCGAGAGGCATCAGAAACATACCATTACTCG AAGATGGGCGACTTGCTGATGCGGTCACAACTTGATGCCAAAGACCCCCGTCTGCCGGGCGCCGGCATTTTCGAT CTCAAAACCAGGGCGGTCGTGTCTATTCGGATGGATGTGCGAGGCTACAAGAAGGGCGTGGGCTATGAAATCCGC AAACAGTTTGGCGAGTGGCAGTCGTTTGAGCGCGAGTATTTTGACATGATCCGAGCCGCTTTTCTCAAGTACTCA TTGCAGGTCCGTATGGGACGCATGGACGGCATATTCGTTGCCTTTCACAACACGCAGCGTATTTTTGGCTTCCAA TACTATGCTCTGAAGGACATGGACTGGGCCCTTCACGGCACACATGATCCACGGCTTGGCGACCAGGAGTTTTTG TTGAGCCTCAAACTTTTGAACCATTTGATGAACATTGCAACACAGCGTTTTCCTGGCCGAACGCTGCGTATCCAT GTGGAAACGCGGCCGGTTCGCGCAACCACGTTGAACTTCTTTGCCGAGCCAATCAGCGATGAACAGATGCATAAG AACCAGCAATCTTGCAAACCACTTGTTGAGCAATTGGAGAATGAGATTCGTGGGCTGACTCCCAACAAATATGAG ACGCAAGGACAACCCAAAAATAGTGAGGATAAGAAGTCGACCAAGCAGCCAGACAGCGGCGGTTCAGTGACGGAC CAAGAGTCTTTTGAAAGGGCTATGGAAGCGGCTTTGCAGAGCGCTCAGGCAAAAGAGGGTAAAGGCGGGAAGATG GATGAAGACGATGTGTCAGAGCTGTTGGGCCTTTCCGTCTCACTCCGAAACCATGTGAACGGTAGCTTTGTCCGC CGGCCAGTCATTGAAGATGAGGATTCTCCGTTTAATTGGAAAATCCAGTACGTCGTGAACGAACTCTCAGACGAC GAGGCTCAAACCTTGTACAAAGCAACCAAGAAGCGGAGACGAACTGTGTTCACCAAGACCCCTGATGAAGCATCA AGAGCGTGGCAGAAGATGTTCAAGGGACAGCTGCGACTCATGACAGAGGAGGGGACGCGACACAGGAAGCGCATG ACGCAGCTATACCAAAATGAGGCTGTTCGTGTGGCCTGGAATATGGATCCACTGCCCAAATCATGA |
| Gene | >OphauG2|4012 ATGTTACGACTTAATCATCTTTCGAGCACTTTCGTCCGCGCCCAACCTTCCATCATCATCTGGCAAAAAAACAGA CGTCTTGCGACCACCCGGCTATATCGACAAGAGAGCGCGGCACAGCAAAGCCCAATCGAACAGCCACCTACACAC CAGGTCGAGATTCTAAATGACTCGAAACAGAAGCAAGAAGCAGAACAAACGTCAAATCAAGCAGAGAATTCATCG CAACAGCCAGACAGAACAAAAATCACATTAGAGGAACAGAACAGAACATCAGCCACTTCAAAGCCGCAGAGCAAC GATGGAAATAAACCACAGAAACATATTCCTAGAGAAAATGTAATCGCACAGCCGAAGAAAGGCTCGAAGCAGGAG CAGAATCCAAATAGAAGACTACCAAGGCCGGGGGCTTTGATATTAAATCGAAGGTGCACACAAAACAAAATTCCA CAAGCCAAAGGGCCCCGGAGGGTACGCCGCAGGGTGCCCAACAATCCCGGAGCAGCGCGCGATTCGCCAGACAAA TATGCCTCTTACCATGAACAATTATGGAACCGGAGCAGCATAGACCTGGGCGAGTACATTGACATCGTTAAAAAC GCAAAAACTGAAGTCGATCCTGTCATAAAGGCTTGGATACAGCTGCTCAAAAAATCCGAATCATTTGGCAAACGT GGCGCTCTGATAAAAGAGACTCCAGTTTTGAAGAGCACGCCAGACTTGAATACTACATCAAACCAGGATCAAGAG AGGACTTTGTCCACTGTCGGTTCTTCACCCGATGATACTAGCACACATTTGTCCAATTCGCCATGCTCTCACTCC GACCAAGCGCCCCTGGAACAAGATACCTTAAAGGTCGAAATTACACAAGACTCATCTTCTAGCCAGGATGCGCCT TTGAACAAAAGCTCCCCCGAGGGTACCTCATCTGATCATGTTTCTCATCAGACTGTGAAAACAAGTCGAGCTAAA GCCAAAACCGCCAAGAATCTCGAATCTATAAACAATCCATCATCAATTAGAATCGAGACAATCGATCCCTCGAAA TTAGAATTTACTGCTCTTGAGGAATCTGATGTCGAGAAAGTGCCATTTCTTCAATACGATCTGGACCGTGTTCTG TTCCAATGCGGCGTACAGCAAATGCAGGATGAACGCACTGGCGTCTTCAACTTCGATCCGTACTTGGCAACCATT ATGCCCACTAATGAATTCGACTTTGACGCTCTCAAGGAATATGTTACGTCTTCCAAGGATGACAAGTTGCGGGGT CTCGCATCTAACCACGGCACCAAGTATTGTGGCTCAACATCAAGCATGACGGCTATTCTCTCTCACTTTCACTAT CTCATTTCCGCATGGAGGCTCCCCAATTTTGGACATGTGTCTCGCTCAGTCTCGCTTGAGAATGAGAATTTCACC ATCATCACTCGTGCGCCCGCGGCTGCCTATCTAGCCTATAAAGATGGGGTTTATGCCATCGATGCGGATAAGCAA TTTGACACGGAAAATGTTCTTAGCATGCTTGGCAAATCAATGGAAAAACTCTTGACGCTCCCAAAGGACGATTAT GAGAAATATCGGCGGACAAAGTCACATACGCTACCCCAAGAGCTGCGAGAGGCATCAGAAACATACCATTACTCG AAGATGGGCGACTTGCTGATGCGGTCACAACTTGATGCCAAAGACCCCCGTCTGCCGGGCGCCGGCATTTTCGAT CTCAAAACCAGGGCGGTCGTGTCTATTCGGATGGATGTGCGAGGCTACAAGAAGGGCGTGGGCTATGAAATCCGC AAACAGTTTGGCGAGTGGCAGTCGTTTGAGCGCGAGTATTTTGACATGATCCGAGCCGCTTTTCTCAAGTACTCA TTGCAGGTCCGTATGGGACGCATGGACGGCATATTCGTTGCCTTTCACAACACGCAGCGTATTTTTGGCTTCCAA TACTATGCTCTGAAGGACATGGACTGGGCCCTTCACGGCACACATGATCCACGGCTTGGCGACCAGGAGTTTTTG TTGAGCCTCAAACTTTTGAACCATTTGATGAACATTGCAACACAGCGTTTTCCTGGCCGAACGCTGCGTATCCAT GTGGAAACGCGGCCGGTTCGCGCAACCACGTTGAACTTCTTTGCCGAGCCAATCAGCGATGAACAGATGCATAAG AACCAGCAATCTTGCAAACCACTTGTTGAGCAATTGGAGAATGAGATTCGTGGGCTGACTCCCAACAAATATGAG ACGCAAGGACAACCCAAAAATAGTGAGGATAAGAAGTCGACCAAGCAGCCAGACAGCGGCGGTTCAGTGACGGAC CAAGAGTCTTTTGAAAGGGCTATGGAAGCGGCTTTGCAGAGCGCTCAGGCAAAAGAGGGTAAAGGCGGGAAGATG GATGAAGACGATGTGTCAGAGCTGTTGGGCCTTTCCGTCTCACTCCGAAACCATGTGAACGGTAGCTTTGTCCGC CGGCCAGTCATTGAAGATGAGGATTCTCCGTTTAATTGGAAAATCCAGTACGTCGTGAACGAACTCTCAGACGAC GAGGCTCAAACCTTGTACAAAGCAACCAAGAAGCGGAGACGAACTGTGTTCACCAAGACCCCTGATGAAGCATCA AGAGCGTGGCAGAAGATGTTCAAGGGACAGCTGCGACTCATGACAGAGGAGGGGACGCGACACAGGAAGCGCATG ACGCAGCTATACCAAAATGAGGCTGTTCGTGTGGCCTGGAATATGGATCCACTGCCCAAATCATGA |