Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|4001
Gene name
Location	Contig_318:14259..15704
Strand	+
Gene length (bp)	1445
Transcript length (bp)	1386
Coding sequence length (bp)	1386
Protein length (aa)	462

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08546	ApbA_C	Ketopantoate reductase PanE/ApbA C terminal	2.3E-16	312	438
PF02558	ApbA	Ketopantoate reductase PanE/ApbA	4.6E-11	109	243

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q8XE72\|PANE_ECO57	2-dehydropantoate 2-reductase OS=Escherichia coli O157:H7 GN=panE PE=3 SV=1	183	438	9.0E-10
sp\|O67619\|PANE_AQUAE	Putative 2-dehydropantoate 2-reductase OS=Aquifex aeolicus (strain VF5) GN=aq_1727 PE=3 SV=1	168	446	3.0E-09
sp\|P0A9J5\|PANE_SHIFL	2-dehydropantoate 2-reductase OS=Shigella flexneri GN=panE PE=3 SV=1	183	438	7.0E-08
sp\|P0A9J4\|PANE_ECOLI	2-dehydropantoate 2-reductase OS=Escherichia coli (strain K12) GN=panE PE=1 SV=1	183	438	7.0E-08
sp\|Q9HDU6\|PANE_SCHPO	Probable 2-dehydropantoate 2-reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB2B2.09c PE=3 SV=1	175	428	8.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|4001 MSFSSRGTRHIFSSPQKKKKSSKWLPHSLQGRVARKRYSTVVSSADNSKTPVPRHTFDTFTQQSQLRQSGPNPTS EASTPTPTPSPHYHTPPVLTSSRADNAPHSGHKIHILGHNEQSKYIAHFLSGVHDSVELLGWKERVSTRYKNIET SETPRSRDSFTVQPNRAPPRVFGALGKSPINNLVVTGHGCEAKEALQSVKHRLRDDTNICFMNNGLGVLEDVKQM ITKGLLPKSNIMMGHMSHRMCFNVNFDSVKVLRNGITKMTPTGMSKVQLDDDFLIMDYRFEIARSLRKARDFQFS LSNFDNWLRFKLPEVIFNSVVEPVCALLEIRYENVLDNISAKRAMVLLMAEIVTVVQKLPELESSDIIRDFLRGK TLHQLIHSKIMAKAGQPSLLLRRIKSGQPTDIDYANGYFLRRGKALGVDVSMNTLVRDLINAKHMHSLERSEGYV PMEHASQLFGA*
Coding	>OphauG2\|4001 ATGTCGTTTTCCTCCCGAGGCACTAGACACATTTTCTCATCACCACAAAAAAAAAAAAAATCGTCAAAGTGGCTA CCACACTCTCTTCAAGGCCGGGTGGCCAGAAAACGCTACAGCACAGTCGTGTCAAGCGCCGACAACTCCAAGACT CCCGTACCTAGACATACATTTGATACCTTTACACAACAGTCACAACTTCGTCAGTCTGGCCCGAATCCGACTTCC GAAGCCTCTACTCCGACCCCGACGCCGTCGCCGCATTACCATACGCCCCCAGTCTTGACATCCTCCCGAGCCGAC AATGCACCACATTCTGGGCACAAAATCCACATTCTTGGTCACAATGAACAATCCAAGTACATTGCACACTTTCTT TCTGGAGTTCATGACTCAGTAGAACTGCTTGGTTGGAAGGAACGCGTATCTACAAGATACAAGAACATTGAAACT TCCGAGACCCCCCGAAGCCGCGATTCCTTCACAGTCCAACCCAACCGGGCACCGCCTCGTGTATTTGGTGCCCTT GGCAAATCACCCATAAACAATCTTGTGGTAACCGGCCACGGCTGCGAAGCTAAAGAGGCTCTCCAATCTGTCAAG CATCGACTTCGTGACGACACCAATATCTGCTTCATGAACAATGGACTCGGCGTCTTGGAAGACGTCAAGCAAATG ATTACCAAGGGGTTGCTTCCCAAGTCAAATATCATGATGGGCCATATGTCTCACCGTATGTGCTTCAATGTTAAC TTTGATTCGGTCAAAGTGCTTCGCAACGGCATAACCAAAATGACGCCGACTGGCATGTCCAAAGTCCAGCTGGAT GATGATTTTCTAATCATGGACTATCGCTTCGAAATTGCGCGCAGCTTACGCAAAGCCAGGGACTTTCAATTTTCG CTGTCAAATTTTGACAACTGGCTTAGATTCAAGCTTCCCGAAGTCATTTTCAATTCCGTCGTCGAGCCTGTTTGC GCTCTGCTTGAGATACGCTACGAGAATGTGCTGGACAATATATCCGCGAAACGAGCAATGGTACTCTTAATGGCA GAAATTGTTACAGTTGTTCAAAAGCTGCCCGAACTCGAGTCCTCCGACATTATTCGAGACTTTCTTCGTGGTAAG ACGCTTCACCAGCTTATTCATTCCAAAATTATGGCCAAAGCAGGGCAACCGAGCTTGTTACTGCGCCGAATCAAG AGCGGGCAGCCCACAGACATCGACTACGCGAACGGGTACTTTTTGCGTCGAGGAAAAGCGCTGGGTGTGGATGTA AGCATGAACACCCTGGTGAGGGATTTGATAAATGCGAAGCATATGCATTCACTTGAGAGATCGGAAGGGTACGTG CCCATGGAACATGCGTCGCAATTGTTTGGCGCATAG
Transcript	>OphauG2\|4001 ATGTCGTTTTCCTCCCGAGGCACTAGACACATTTTCTCATCACCACAAAAAAAAAAAAAATCGTCAAAGTGGCTA CCACACTCTCTTCAAGGCCGGGTGGCCAGAAAACGCTACAGCACAGTCGTGTCAAGCGCCGACAACTCCAAGACT CCCGTACCTAGACATACATTTGATACCTTTACACAACAGTCACAACTTCGTCAGTCTGGCCCGAATCCGACTTCC GAAGCCTCTACTCCGACCCCGACGCCGTCGCCGCATTACCATACGCCCCCAGTCTTGACATCCTCCCGAGCCGAC AATGCACCACATTCTGGGCACAAAATCCACATTCTTGGTCACAATGAACAATCCAAGTACATTGCACACTTTCTT TCTGGAGTTCATGACTCAGTAGAACTGCTTGGTTGGAAGGAACGCGTATCTACAAGATACAAGAACATTGAAACT TCCGAGACCCCCCGAAGCCGCGATTCCTTCACAGTCCAACCCAACCGGGCACCGCCTCGTGTATTTGGTGCCCTT GGCAAATCACCCATAAACAATCTTGTGGTAACCGGCCACGGCTGCGAAGCTAAAGAGGCTCTCCAATCTGTCAAG CATCGACTTCGTGACGACACCAATATCTGCTTCATGAACAATGGACTCGGCGTCTTGGAAGACGTCAAGCAAATG ATTACCAAGGGGTTGCTTCCCAAGTCAAATATCATGATGGGCCATATGTCTCACCGTATGTGCTTCAATGTTAAC TTTGATTCGGTCAAAGTGCTTCGCAACGGCATAACCAAAATGACGCCGACTGGCATGTCCAAAGTCCAGCTGGAT GATGATTTTCTAATCATGGACTATCGCTTCGAAATTGCGCGCAGCTTACGCAAAGCCAGGGACTTTCAATTTTCG CTGTCAAATTTTGACAACTGGCTTAGATTCAAGCTTCCCGAAGTCATTTTCAATTCCGTCGTCGAGCCTGTTTGC GCTCTGCTTGAGATACGCTACGAGAATGTGCTGGACAATATATCCGCGAAACGAGCAATGGTACTCTTAATGGCA GAAATTGTTACAGTTGTTCAAAAGCTGCCCGAACTCGAGTCCTCCGACATTATTCGAGACTTTCTTCGTGGTAAG ACGCTTCACCAGCTTATTCATTCCAAAATTATGGCCAAAGCAGGGCAACCGAGCTTGTTACTGCGCCGAATCAAG AGCGGGCAGCCCACAGACATCGACTACGCGAACGGGTACTTTTTGCGTCGAGGAAAAGCGCTGGGTGTGGATGTA AGCATGAACACCCTGGTGAGGGATTTGATAAATGCGAAGCATATGCATTCACTTGAGAGATCGGAAGGGTACGTG CCCATGGAACATGCGTCGCAATTGTTTGGCGCATAG
Gene	>OphauG2\|4001 ATGTCGTTTTCCTCCCGAGGCACTAGACACATTTTCTCATCACCACAAAAAAAAAAAAAATCGTCAAAGTGGCTA CCACACTCTCTTCAAGGGTATCTACCAAGATAGCTCCAAAGCTATTGCGATGCGTCCCAAATAACCTTTGGGCCA GCCGGGTGGCCAGAAAACGCTACAGCACAGTCGTGTCAAGCGCCGACAACTCCAAGACTCCCGTACCTAGACATA CATTTGATACCTTTACACAACAGTCACAACTTCGTCAGTCTGGCCCGAATCCGACTTCCGAAGCCTCTACTCCGA CCCCGACGCCGTCGCCGCATTACCATACGCCCCCAGTCTTGACATCCTCCCGAGCCGACAATGCACCACATTCTG GGCACAAAATCCACATTCTTGGTCACAATGAACAATCCAAGTACATTGCACACTTTCTTTCTGGAGTTCATGACT CAGTAGAACTGCTTGGTTGGAAGGAACGCGTATCTACAAGATACAAGAACATTGAAACTTCCGAGACCCCCCGAA GCCGCGATTCCTTCACAGTCCAACCCAACCGGGCACCGCCTCGTGTATTTGGTGCCCTTGGCAAATCACCCATAA ACAATCTTGTGGTAACCGGCCACGGCTGCGAAGCTAAAGAGGCTCTCCAATCTGTCAAGCATCGACTTCGTGACG ACACCAATATCTGCTTCATGAACAATGGACTCGGCGTCTTGGAAGACGTCAAGCAAATGATTACCAAGGGGTTGC TTCCCAAGTCAAATATCATGATGGGCCATATGTCTCACCGTATGTGCTTCAATGTTAACTTTGATTCGGTCAAAG TGCTTCGCAACGGCATAACCAAAATGACGCCGACTGGCATGTCCAAAGTCCAGCTGGATGATGATTTTCTAATCA TGGACTATCGCTTCGAAATTGCGCGCAGCTTACGCAAAGCCAGGGACTTTCAATTTTCGCTGTCAAATTTTGACA ACTGGCTTAGATTCAAGCTTCCCGAAGTCATTTTCAATTCCGTCGTCGAGCCTGTTTGCGCTCTGCTTGAGATAC GCTACGAGAATGTGCTGGACAATATATCCGCGAAACGAGCAATGGTACTCTTAATGGCAGAAATTGTTACAGTTG TTCAAAAGCTGCCCGAACTCGAGTCCTCCGACATTATTCGAGACTTTCTTCGTGGTAAGACGCTTCACCAGCTTA TTCATTCCAAAATTATGGCCAAAGCAGGGCAACCGAGCTTGTTACTGCGCCGAATCAAGAGCGGGCAGCCCACAG ACATCGACTACGCGAACGGGTACTTTTTGCGTCGAGGAAAAGCGCTGGGTGTGGATGTAAGCATGAACACCCTGG TGAGGGATTTGATAAATGCGAAGCATATGCATTCACTTGAGAGATCGGAAGGGTACGTGCCCATGGAACATGCGT CGCAATTGTTTGGCGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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