© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|40 |
| Gene name | |
| Location | Contig_1:94720..96699 |
| Strand | + |
| Gene length (bp) | 1979 |
| Transcript length (bp) | 1800 |
| Coding sequence length (bp) | 1800 |
| Protein length (aa) | 600 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01569 | PAP2 | PAP2 superfamily | 4.0E-18 | 177 | 297 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6N5|DS1PP_SCHPO | Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 | 97 | 408 | 1.0E-68 |
| sp|P47013|DS1P1_YEAST | Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 | 89 | 407 | 6.0E-55 |
| sp|P23501|DS1P2_YEAST | Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 | 84 | 403 | 3.0E-50 |
| sp|Q9M2G7|LPPD_ARATH | Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 | 98 | 359 | 2.0E-21 |
| sp|Q55A00|SSPA_DICDI | Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 | 112 | 289 | 5.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6N5|DS1PP_SCHPO | Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 | 97 | 408 | 1.0E-68 |
| sp|P47013|DS1P1_YEAST | Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 | 89 | 407 | 6.0E-55 |
| sp|P23501|DS1P2_YEAST | Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 | 84 | 403 | 3.0E-50 |
| sp|Q9M2G7|LPPD_ARATH | Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 | 98 | 359 | 2.0E-21 |
| sp|Q55A00|SSPA_DICDI | Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 | 112 | 289 | 5.0E-16 |
| sp|Q8IWX5|SGPP2_HUMAN | Sphingosine-1-phosphate phosphatase 2 OS=Homo sapiens GN=SGPP2 PE=2 SV=1 | 146 | 408 | 8.0E-13 |
| sp|Q810K3|SGPP2_MOUSE | Sphingosine-1-phosphate phosphatase 2 OS=Mus musculus GN=Sgpp2 PE=2 SV=1 | 146 | 411 | 2.0E-11 |
| sp|Q9BX95|SGPP1_HUMAN | Sphingosine-1-phosphate phosphatase 1 OS=Homo sapiens GN=SGPP1 PE=1 SV=2 | 146 | 423 | 2.0E-09 |
| sp|Q9JI99|SGPP1_MOUSE | Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus GN=Sgpp1 PE=1 SV=1 | 146 | 290 | 6.0E-08 |
| sp|Q99P55|SGPP1_RAT | Sphingosine-1-phosphate phosphatase 1 OS=Rattus norvegicus GN=Sgpp1 PE=1 SV=2 | 146 | 290 | 8.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 145 | 167 | 22 |
| 3 | 169 | 191 | 22 |
| 4 | 252 | 271 | 19 |
| 5 | 276 | 295 | 19 |
| 6 | 305 | 327 | 22 |
| 7 | 340 | 357 | 17 |
| 8 | 372 | 391 | 19 |
| 9 | 574 | 596 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|40 MVLSPCRRHHAVLPALLLNVVASSFMLNIVCFIITLAAALVQPSPRHPPLSALSCALRRPPSAISTMSGPGRPPS PRRQPCNGKLVPPDANHVPEAGLRSLDHYRKALPPWRYAIRHKMLPLIRCETPYLAGMQQTLRTPALDSYFAITA NLGTHTFFMVGLPIIFWCGYASFGKGLVHILALGVFWTGFVKDFLSLPRPLSPPLHRITMSGSAALEYGFPSTHS ANAVSVAVYALLHLHSPASTLSEPTKLLLEALCYFYAASIVFGRLYCGMHGFLDVAVGSLFGVAIGWLEFTYGPC LNHHLYSSSWLVPLLVSIAIVVFVGLHPEPADDCPCFDDSVAFAGVLIGLEFGTWTYSKSSGGATGPDSIPLGLA LNVARIVLGVLVIFAWRETMKPTLLKLLPHLFRWMEHLGWSLPRRFFTPATEYKSVPTGSRLDTLFPAASDFPRM VQGIRHPTTRGRSVSIGPQSAADAYETLAYRELRRRESVATGVSDDGTGDDELFGSARRDRDCSGRDAQSSAVQR HSLARHDHETMVNGSPASHVAEARLEEKQMFSLLVRPRVRYDVEVVTKLVIYAGIAGLATAVIPHVFALVGLDA* |
| Coding | >OphauG2|40 ATGGTGCTCTCTCCTTGTCGTCGCCATCACGCCGTCTTGCCCGCCTTGCTCCTCAATGTCGTCGCCTCCAGCTTC ATGCTCAACATCGTCTGCTTCATCATCACGCTCGCCGCCGCCCTCGTCCAACCCTCGCCTCGCCATCCACCTCTG TCTGCCCTGTCTTGCGCACTGCGCCGCCCGCCGTCTGCGATTTCCACCATGAGCGGCCCTGGGCGCCCGCCTTCG CCGCGTCGACAGCCTTGCAATGGCAAGCTGGTGCCTCCCGACGCCAATCATGTCCCCGAGGCCGGTCTTAGGAGT CTCGACCACTACAGGAAAGCGTTGCCGCCATGGCGCTATGCCATTCGCCACAAGATGCTGCCTCTGATCCGCTGC GAGACACCCTACCTGGCCGGCATGCAGCAGACGCTGCGCACTCCGGCCCTTGACAGCTACTTTGCCATCACGGCC AATCTGGGCACCCATACCTTCTTCATGGTTGGCCTGCCCATCATCTTTTGGTGCGGATACGCCTCGTTTGGAAAG GGTCTTGTCCATATTCTGGCCCTTGGCGTCTTTTGGACAGGCTTTGTCAAGGATTTCTTGTCGCTACCGCGTCCT CTGTCTCCTCCCCTACACCGCATCACCATGTCGGGCTCAGCCGCCCTCGAATACGGCTTTCCCTCCACACACAGC GCCAATGCCGTTTCAGTCGCTGTCTATGCACTCTTGCACCTGCACAGCCCAGCCAGTACACTATCCGAGCCCACC AAGCTGTTGCTCGAGGCCCTCTGCTACTTTTACGCCGCATCCATTGTCTTTGGCCGCCTCTACTGCGGCATGCAC GGCTTCCTCGACGTGGCCGTGGGCTCCTTGTTTGGTGTGGCCATTGGGTGGCTAGAATTTACCTATGGCCCCTGC CTAAACCATCACCTGTACTCGAGCTCATGGCTTGTGCCTCTGCTCGTCAGCATCGCCATTGTCGTCTTTGTCGGT TTACATCCCGAGCCTGCTGATGACTGTCCTTGCTTTGACGACAGCGTAGCTTTTGCTGGTGTCTTGATTGGGCTC GAGTTCGGCACATGGACGTACAGCAAAAGCTCGGGTGGTGCTACTGGCCCCGACTCGATACCCCTTGGTCTGGCG CTCAACGTGGCACGCATCGTCTTGGGCGTGCTCGTTATTTTTGCCTGGCGTGAGACGATGAAGCCGACGCTGCTC AAGCTATTGCCCCATCTATTTCGTTGGATGGAGCACCTTGGCTGGAGCTTACCCAGGCGCTTCTTCACTCCAGCC ACCGAGTACAAATCGGTCCCTACTGGCTCGCGCCTCGACACTCTGTTTCCTGCCGCTTCGGACTTTCCCCGCATG GTGCAAGGCATCCGCCATCCCACCACCAGGGGCAGATCTGTGTCAATTGGGCCTCAGAGCGCTGCTGATGCGTAC GAGACGCTAGCATATCGCGAGCTCCGTCGCAGAGAGAGTGTGGCCACGGGCGTTAGTGACGATGGTACCGGTGAC GACGAGCTCTTTGGCAGTGCTCGCAGGGACCGAGACTGCTCAGGCCGAGACGCCCAGTCAAGTGCAGTACAGAGA CATTCTCTGGCGCGCCACGACCATGAGACAATGGTTAATGGCAGTCCTGCCAGCCACGTTGCCGAGGCGCGCCTC GAGGAGAAGCAAATGTTTTCTCTACTCGTAAGGCCGCGGGTCAGATACGATGTCGAAGTCGTCACCAAGCTGGTC ATTTATGCAGGCATCGCCGGTCTTGCAACAGCGGTAATTCCTCACGTCTTTGCGCTCGTTGGCTTGGATGCTTGA |
| Transcript | >OphauG2|40 ATGGTGCTCTCTCCTTGTCGTCGCCATCACGCCGTCTTGCCCGCCTTGCTCCTCAATGTCGTCGCCTCCAGCTTC ATGCTCAACATCGTCTGCTTCATCATCACGCTCGCCGCCGCCCTCGTCCAACCCTCGCCTCGCCATCCACCTCTG TCTGCCCTGTCTTGCGCACTGCGCCGCCCGCCGTCTGCGATTTCCACCATGAGCGGCCCTGGGCGCCCGCCTTCG CCGCGTCGACAGCCTTGCAATGGCAAGCTGGTGCCTCCCGACGCCAATCATGTCCCCGAGGCCGGTCTTAGGAGT CTCGACCACTACAGGAAAGCGTTGCCGCCATGGCGCTATGCCATTCGCCACAAGATGCTGCCTCTGATCCGCTGC GAGACACCCTACCTGGCCGGCATGCAGCAGACGCTGCGCACTCCGGCCCTTGACAGCTACTTTGCCATCACGGCC AATCTGGGCACCCATACCTTCTTCATGGTTGGCCTGCCCATCATCTTTTGGTGCGGATACGCCTCGTTTGGAAAG GGTCTTGTCCATATTCTGGCCCTTGGCGTCTTTTGGACAGGCTTTGTCAAGGATTTCTTGTCGCTACCGCGTCCT CTGTCTCCTCCCCTACACCGCATCACCATGTCGGGCTCAGCCGCCCTCGAATACGGCTTTCCCTCCACACACAGC GCCAATGCCGTTTCAGTCGCTGTCTATGCACTCTTGCACCTGCACAGCCCAGCCAGTACACTATCCGAGCCCACC AAGCTGTTGCTCGAGGCCCTCTGCTACTTTTACGCCGCATCCATTGTCTTTGGCCGCCTCTACTGCGGCATGCAC GGCTTCCTCGACGTGGCCGTGGGCTCCTTGTTTGGTGTGGCCATTGGGTGGCTAGAATTTACCTATGGCCCCTGC CTAAACCATCACCTGTACTCGAGCTCATGGCTTGTGCCTCTGCTCGTCAGCATCGCCATTGTCGTCTTTGTCGGT TTACATCCCGAGCCTGCTGATGACTGTCCTTGCTTTGACGACAGCGTAGCTTTTGCTGGTGTCTTGATTGGGCTC GAGTTCGGCACATGGACGTACAGCAAAAGCTCGGGTGGTGCTACTGGCCCCGACTCGATACCCCTTGGTCTGGCG CTCAACGTGGCACGCATCGTCTTGGGCGTGCTCGTTATTTTTGCCTGGCGTGAGACGATGAAGCCGACGCTGCTC AAGCTATTGCCCCATCTATTTCGTTGGATGGAGCACCTTGGCTGGAGCTTACCCAGGCGCTTCTTCACTCCAGCC ACCGAGTACAAATCGGTCCCTACTGGCTCGCGCCTCGACACTCTGTTTCCTGCCGCTTCGGACTTTCCCCGCATG GTGCAAGGCATCCGCCATCCCACCACCAGGGGCAGATCTGTGTCAATTGGGCCTCAGAGCGCTGCTGATGCGTAC GAGACGCTAGCATATCGCGAGCTCCGTCGCAGAGAGAGTGTGGCCACGGGCGTTAGTGACGATGGTACCGGTGAC GACGAGCTCTTTGGCAGTGCTCGCAGGGACCGAGACTGCTCAGGCCGAGACGCCCAGTCAAGTGCAGTACAGAGA CATTCTCTGGCGCGCCACGACCATGAGACAATGGTTAATGGCAGTCCTGCCAGCCACGTTGCCGAGGCGCGCCTC GAGGAGAAGCAAATGTTTTCTCTACTCGTAAGGCCGCGGGTCAGATACGATGTCGAAGTCGTCACCAAGCTGGTC ATTTATGCAGGCATCGCCGGTCTTGCAACAGCGGTAATTCCTCACGTCTTTGCGCTCGTTGGCTTGGATGCTTGA |
| Gene | >OphauG2|40 ATGGTGCTCTCTCCTTGTCGTCGCCATCACGCCGTCTTGCCCGCCTTGCTCCTCAATGTCGTCGCCTCCAGCTTC ATGCTCAACATCGTCTGCTTCATCATCACGCTCGCCGCCGCCCTCGTCCAACCCTCGCCTCGCCATCCACCTCTG TCTGCCCTGTCTTGCGCACTGCGCCGCCCGCCGTCTGCGATTTCCACCATGAGCGGCCCTGGGCGCCCGCCTTCG CCGCGTCGACAGCCTTGCAATGGCAAGCTGGTGCCTCCCGACGCCAATCATGTCCCCGAGGCCGGTCTTAGGAGT CTCGACCACTGTGAGCCATTGTCCATGCCCAGAGGCTTGGTGCACTCGCTGATTGCTCGTCTTGCTCGTCTCTAG ACAGGAAAGCGTTGCCGCCATGGCGCTATGCCATTCGCCACAAGATGCTGCCTCTGATCCGCTGCGAGACACCCT ACCTGGCCGGCATGCAGCAGACGCTGCGCACTCCGGCCCTTGACAGCTACTTTGCCATCACGGCCAATCTGGGCA CCCATACCTTCTTCATGGTTGGCCTGCCCATCATCTTTTGGTGCGGATACGCCTCGTTTGGAAAGGGGTGCGTCG TCCACCCTCGACAACTGCGCGATACTGGCTGACGACCACGTCTTAGTCTTGTCCATATTCTGGCCCTTGGCGTCT TTTGGACAGGCTTTGTCAAGGATTTCTTGTCGCTACCGCGTCCTCTGTCTCCTCCCCTACACCGCATCACCATGT CGGGCTCAGCCGCCCTCGAATACGGCTTTCCCTCCACACACAGCGCCAATGCCGTTTCAGTCGCTGTCTATGCAC TCTTGCACCTGCACAGCCCAGCCAGTACACTATCCGAGCCCACCAAGCTGTTGCTCGAGGCCCTCTGCTACTTTT ACGCCGCATCCATTGTCTTTGGCCGCCTCTACTGCGGCATGCACGGCTTCCTCGACGTGGCCGTGGGCTCCTTGT TTGGTGTGGCCATTGGGTGGCTAGAATTTACCTATGGCCCCTGCCTAAACCATCACCTGTACTCGAGCTCATGGC TTGTGCCTCTGCTCGTCAGCATCGCCATTGTCGTCTTTGTCGGTTTACATCCCGAGCCTGCTGATGACTGTCCTT GCTTTGACGACAGCGTAGCTTTTGCTGGTGTCTTGATTGGGCTCGAGTTCGGCACATGGACGTACAGCAAAAGCT CGGGTGGTGCTACTGGCCCCGACTCGATACCCCTTGGTCTGGCGCTCAACGTGGCACGCATCGTCTTGGGCGTGC TCGTTATTTTTGCCTGGCGTGAGACGATGAAGCCGACGCTGCTCAAGCTATTGCCCCATCTATTTCGTTGGATGG AGCACCTTGGCTGGAGCTTACCCAGGCGCTTCTTCACTCCAGCCACCGAGTACAAATCGGTCCCTACTGGCTCGC GCCTCGACACTCTGTTTCCTGCCGCTTCGGACTTTCCCCGCATGGTGCAAGGCATCCGCCATCCCACCACCAGGG GCAGATCTGTGTCAATTGGGCCTCAGAGCGCTGCTGATGCGTACGAGACGCTAGCATATCGCGAGCTCCGTCGCA GAGAGAGTGTGGCCACGGGCGTTAGTGACGATGGTACCGGTGACGACGAGCTCTTTGGCAGTGCTCGCAGGGACC GAGACTGCTCAGGCCGAGACGCCCAGTCAAGTGCAGTACAGAGACATTCTCTGGCGCGCCACGACCATGAGACAA TGGTTAATGGCAGTCCTGCCAGCCACGTTGCCGAGGCGCGCCTCGAGGAGAAGCAAATGTTTTCTCTACTCGTAA GGCCGCGGGTCAGATACGATGTCGAAGTCGTCACCAAGCTGGTCATTTATGCAGGTGAGAATGCCAATGTCTGAT TGTTTTTGTTCATTGTGACTCCGCTGACAGACTACCTAGGCATCGCCGGTCTTGCAACAGCGGTAATTCCTCACG TCTTTGCGCTCGTTGGCTTGGATGCTTGA |