Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|3996
Gene name
LocationContig_318:6345..7920
Strand+
Gene length (bp)1575
Transcript length (bp)1395
Coding sequence length (bp)1395
Protein length (aa) 465

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00789 UBX UBX domain 4.7E-14 282 361

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1 2 375 4.0E-20
sp|P34631|UBXN4_CAEEL UBX domain-containing protein 4 OS=Caenorhabditis elegans GN=ubxn-4 PE=3 SV=1 2 454 5.0E-13
sp|Q6NXA9|UBXN1_DANRE UBX domain-containing protein 1 OS=Danio rerio GN=ubxn1 PE=2 SV=1 213 361 1.0E-09
sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1 226 361 2.0E-07
sp|Q92575|UBXN4_HUMAN UBX domain-containing protein 4 OS=Homo sapiens GN=UBXN4 PE=1 SV=2 1 451 3.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1 2 375 4.0E-20
sp|P34631|UBXN4_CAEEL UBX domain-containing protein 4 OS=Caenorhabditis elegans GN=ubxn-4 PE=3 SV=1 2 454 5.0E-13
sp|Q6NXA9|UBXN1_DANRE UBX domain-containing protein 1 OS=Danio rerio GN=ubxn1 PE=2 SV=1 213 361 1.0E-09
sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1 226 361 2.0E-07
sp|Q92575|UBXN4_HUMAN UBX domain-containing protein 4 OS=Homo sapiens GN=UBXN4 PE=1 SV=2 1 451 3.0E-07
sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2 SV=1 219 361 3.0E-07
sp|Q32KW2|UBXN1_BOVIN UBX domain-containing protein 1 OS=Bos taurus GN=UBXN1 PE=2 SV=1 229 361 4.0E-07
sp|Q499N6|UBXN1_RAT UBX domain-containing protein 1 OS=Rattus norvegicus GN=Ubxn1 PE=3 SV=2 226 361 4.0E-07
sp|Q5HZY0|UBXN4_RAT UBX domain-containing protein 4 OS=Rattus norvegicus GN=Ubxn4 PE=1 SV=1 1 418 6.0E-07
sp|Q5R4I3|UBXN4_PONAB UBX domain-containing protein 4 OS=Pongo abelii GN=UBXN4 PE=2 SV=1 1 451 8.0E-07
sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2 226 361 1.0E-06
sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2 SV=1 213 361 1.0E-06
sp|Q8VCH8|UBXN4_MOUSE UBX domain-containing protein 4 OS=Mus musculus GN=Ubxn4 PE=1 SV=1 1 418 2.0E-06
sp|Q3ZBU9|UBXN4_BOVIN UBX domain-containing protein 4 OS=Bos taurus GN=UBXN4 PE=2 SV=2 1 451 3.0E-06
sp|Q6GLV4|UBX1B_XENLA UBX domain-containing protein 1-B OS=Xenopus laevis GN=ubxn1-b PE=2 SV=1 213 361 5.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 377 399 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|3996
MFYQGPLQEGISMAVGQQKMVLCFVTNENQVSQTWENDYLQDDSLRDLISQHAVALRMMVDSEEAKYLAQIFPLP
QTPTIVIMKHGELKEYIAPNETRENFIRRMLTAFDALPPPEPLQEAHNGPPTTQPTSSPSGPRQSLESNTSPPPA
RTSARSDPPTDSVARILAERAARLQAEKEEAERRAKQQSTESQARAQAEADSGADTQGARSTRYAQQLRRRRQQE
LDERKRILKRIEDDKEERRQRAAERDRMRIDNQRPGDIAASLVKAPESKIPSTSRIGDTASIQVRLSDGTTIRSR
FKSLVPFSHVRKWVDQDRTDGHMPYTFRQVLTPQPNQAINETEENKTLSQLGLAPSATLILIPVPNFSSAYEEGP
RTILTQILGVFIGLFTSLMGLFGFRGSQTSQPKQPGAPVGSTEVPSASSQEKPRGVRGFSNPDDRPRDHQLYNGN
SLNFEPRPEEQDDE*
Coding >OphauG2|3996
ATGTTCTATCAAGGACCCCTGCAAGAGGGCATCTCCATGGCTGTCGGCCAGCAGAAAATGGTGCTTTGTTTTGTC
ACCAACGAAAACCAAGTGAGCCAAACATGGGAAAACGACTACCTTCAAGATGACTCTCTGAGAGACTTGATATCG
CAACACGCGGTTGCCTTGCGCATGATGGTCGACTCCGAGGAAGCCAAGTACCTGGCGCAAATATTTCCTCTTCCT
CAGACCCCCACCATTGTCATTATGAAGCACGGCGAACTCAAGGAGTACATTGCGCCCAACGAGACAAGAGAAAAT
TTCATTAGGCGAATGCTCACTGCCTTTGATGCCTTGCCTCCACCAGAGCCTCTGCAAGAAGCCCACAATGGCCCC
CCGACTACTCAGCCAACCTCGAGTCCTTCTGGACCAAGGCAATCACTGGAATCAAACACTTCGCCTCCACCGGCT
CGTACCTCGGCTCGATCCGACCCCCCCACGGACAGCGTCGCCCGCATCCTCGCTGAGCGCGCCGCGCGTCTTCAG
GCTGAAAAAGAAGAAGCCGAACGACGAGCCAAGCAACAGAGCACCGAGTCACAGGCAAGAGCCCAAGCCGAAGCC
GACTCTGGAGCCGATACCCAAGGTGCGAGAAGCACTCGCTACGCTCAACAGCTCCGTCGGAGGCGGCAGCAGGAG
CTCGATGAGCGCAAGCGCATCCTCAAGCGCATTGAAGACGACAAGGAAGAACGACGTCAGCGTGCTGCCGAGCGA
GACCGGATGCGCATTGATAACCAGCGTCCTGGCGACATTGCCGCGTCGCTCGTCAAGGCTCCCGAGTCCAAGATT
CCCTCCACCTCACGAATCGGCGACACAGCATCCATTCAGGTCAGGCTATCAGATGGCACCACAATACGCTCTCGC
TTCAAAAGCCTCGTCCCATTTAGTCACGTGCGAAAATGGGTCGACCAAGACAGGACCGACGGCCATATGCCATAT
ACCTTTCGCCAGGTCCTGACTCCGCAGCCCAACCAGGCTATCAACGAGACGGAGGAAAACAAGACTCTTAGTCAA
CTTGGCCTAGCCCCTTCGGCAACTCTGATTCTGATTCCTGTTCCAAATTTCTCCTCAGCATACGAAGAAGGGCCT
CGGACCATTCTGACACAAATTTTGGGCGTCTTTATTGGCCTTTTCACGTCGCTCATGGGGCTTTTTGGTTTCCGT
GGAAGTCAGACGAGTCAACCAAAACAGCCAGGAGCTCCAGTTGGCAGTACAGAGGTGCCGTCGGCTTCGAGTCAG
GAAAAACCACGAGGTGTCCGTGGATTTAGTAACCCGGATGATAGACCAAGAGACCACCAACTTTATAACGGCAAT
TCACTCAACTTTGAACCACGGCCCGAGGAGCAAGACGATGAGTAA
Transcript >OphauG2|3996
ATGTTCTATCAAGGACCCCTGCAAGAGGGCATCTCCATGGCTGTCGGCCAGCAGAAAATGGTGCTTTGTTTTGTC
ACCAACGAAAACCAAGTGAGCCAAACATGGGAAAACGACTACCTTCAAGATGACTCTCTGAGAGACTTGATATCG
CAACACGCGGTTGCCTTGCGCATGATGGTCGACTCCGAGGAAGCCAAGTACCTGGCGCAAATATTTCCTCTTCCT
CAGACCCCCACCATTGTCATTATGAAGCACGGCGAACTCAAGGAGTACATTGCGCCCAACGAGACAAGAGAAAAT
TTCATTAGGCGAATGCTCACTGCCTTTGATGCCTTGCCTCCACCAGAGCCTCTGCAAGAAGCCCACAATGGCCCC
CCGACTACTCAGCCAACCTCGAGTCCTTCTGGACCAAGGCAATCACTGGAATCAAACACTTCGCCTCCACCGGCT
CGTACCTCGGCTCGATCCGACCCCCCCACGGACAGCGTCGCCCGCATCCTCGCTGAGCGCGCCGCGCGTCTTCAG
GCTGAAAAAGAAGAAGCCGAACGACGAGCCAAGCAACAGAGCACCGAGTCACAGGCAAGAGCCCAAGCCGAAGCC
GACTCTGGAGCCGATACCCAAGGTGCGAGAAGCACTCGCTACGCTCAACAGCTCCGTCGGAGGCGGCAGCAGGAG
CTCGATGAGCGCAAGCGCATCCTCAAGCGCATTGAAGACGACAAGGAAGAACGACGTCAGCGTGCTGCCGAGCGA
GACCGGATGCGCATTGATAACCAGCGTCCTGGCGACATTGCCGCGTCGCTCGTCAAGGCTCCCGAGTCCAAGATT
CCCTCCACCTCACGAATCGGCGACACAGCATCCATTCAGGTCAGGCTATCAGATGGCACCACAATACGCTCTCGC
TTCAAAAGCCTCGTCCCATTTAGTCACGTGCGAAAATGGGTCGACCAAGACAGGACCGACGGCCATATGCCATAT
ACCTTTCGCCAGGTCCTGACTCCGCAGCCCAACCAGGCTATCAACGAGACGGAGGAAAACAAGACTCTTAGTCAA
CTTGGCCTAGCCCCTTCGGCAACTCTGATTCTGATTCCTGTTCCAAATTTCTCCTCAGCATACGAAGAAGGGCCT
CGGACCATTCTGACACAAATTTTGGGCGTCTTTATTGGCCTTTTCACGTCGCTCATGGGGCTTTTTGGTTTCCGT
GGAAGTCAGACGAGTCAACCAAAACAGCCAGGAGCTCCAGTTGGCAGTACAGAGGTGCCGTCGGCTTCGAGTCAG
GAAAAACCACGAGGTGTCCGTGGATTTAGTAACCCGGATGATAGACCAAGAGACCACCAACTTTATAACGGCAAT
TCACTCAACTTTGAACCACGGCCCGAGGAGCAAGACGATGAGTAA
Gene >OphauG2|3996
ATGTTCTATCAAGGACCCCTGCAAGAGGGCATCTCCATGGCTGTCGGCCAGCAGAAAATGGTGCTTTGTTTTGTC
ACCAGTATGCCGCCCCGGTCAATTAAACCCTGCATAGCTTTGGCTTATGTTTTTATCTAGACGAAAACCAAGTGA
GCCAAACATGGGAAAACGACTACCTTCAAGATGACTCTGTATGCATCCCCGTCCACTTCTCCACTGGCGGCTGTG
AGCTGATAATTCGCAGCTGAGAGACTTGATATCGCAACACGCGGTTGCCTTGCGCATGATGGTCGACTCCGAGGA
AGCCAAGTACCTGGCGCAAATATTTCCTCTTCCTCAGACCCCCACCATTGTCATTATGAAGCACGGCGAACTCAA
GGAGTACATTGCGCCCAACGAGACAAGAGAAAATTTCATTAGGCGAATGCTCACTGCCTTTGATGCCTTGCCTCC
ACCAGAGCCTCTGCAAGAAGCCCACAATGGCCCCCCGACTACTCAGCCAACCTCGAGTCCTTCTGGACCAAGGCA
ATCACTGGAATCAAACACTTCGCCTCCACCGGCTCGTACCTCGGCTCGATCCGACCCCCCCACGGACAGCGTCGC
CCGCATCCTCGCTGAGCGCGCCGCGCGTCTTCAGGCTGAAAAAGAAGAAGCCGAACGACGAGCCAAGCAACAGAG
CACCGAGTCACAGGCAAGAGCCCAAGCCGAAGCCGACTCTGGAGCCGATACCCAAGGTGCGAGAAGCACTCGCTA
CGCTCAACAGCTCCGTCGGAGGCGGCAGCAGGAGCTCGATGAGCGCAAGCGCATCCTCAAGCGCATTGAAGACGA
CAAGGAAGAACGACGTCAGCGTGCTGCCGAGCGAGACCGGATGCGCATTGATAACCAGCGTCCTGGCGACATTGC
CGCGTCGCTCGTCAAGGCTCCCGAGTCCAAGATTCCCTCCACCTCACGAATCGGCGACACAGCATCCATTCAGGT
CAGGCTATCAGATGGCACCACAATACGCTCTCGCTTCAAAAGCCTCGTCCCATTTAGTCACGTGCGAAAATGGGT
CGACCAAGACAGGACCGACGGCCATATGCCATATACCTTTCGCCAGGTCCTGACTCCGCAGCCCAACCAGGCTAT
CAACGAGACGGAGGAAAACAAGACTCTTAGTCAACTTGGCCTAGCCCCTTCGGCAACTCTGATTCTGATTCCTGT
TCCAAATTTCTCCTCAGCATACGAAGAAGGGCCTCGGACCATTCTGACACAAATTTTGGGCGTCTTTATTGGCCT
TTTCACGTCGCTCATGGGGCTTTTTGGTTTCCGTGGAAGTCAGACGAGTCAACCAAAACAGCCAGGAGCTCCAGT
TGGCAGTACAGAGGTGCCGTCGGCTTCGAGTCAGGAAAAACCACGAGGTGTCCGTGGATTTAGTAACCCGGATGA
TAGACCAAGAGACCACCAACTTTATAACGGCAATTCAGTAAGTAACGTGCTCACAGTTGACTTTTCAAAACTCGA
TACTGGTTACTTGAAGCCTGACACATACTGCAGCTCAACTTTGAACCACGGCCCGAGGAGCAAGACGATGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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