Protein ID | OphauG2|3935 |
Gene name | |
Location | Contig_31:30366..32742 |
Strand | + |
Gene length (bp) | 2376 |
Transcript length (bp) | 2376 |
Coding sequence length (bp) | 2376 |
Protein length (aa) | 792 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07842 | GCFC | GC-rich sequence DNA-binding factor-like protein | 8.4E-61 | 470 | 743 |
PF01585 | G-patch | G-patch domain | 5.1E-13 | 231 | 272 |
PF12457 | TIP_N | Tuftelin interacting protein N terminal | 1.9E-10 | 41 | 118 |
PF12656 | G-patch_2 | G-patch domain | 3.3E-07 | 231 | 274 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UTK6|YKR3_SCHPO | G-patch domain-containing protein C1486.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1486.03c PE=3 SV=1 | 191 | 789 | 4.0E-44 |
sp|Q6DI35|TFP11_DANRE | Tuftelin-interacting protein 11 OS=Danio rerio GN=tfip11 PE=1 SV=1 | 232 | 789 | 6.0E-31 |
sp|Q66J74|TFP11_XENLA | Tuftelin-interacting protein 11 OS=Xenopus laevis GN=tfip11 PE=2 SV=1 | 39 | 789 | 4.0E-30 |
sp|Q0IIX9|TFP11_XENTR | Tuftelin-interacting protein 11 OS=Xenopus tropicalis GN=tfip11 PE=2 SV=2 | 232 | 789 | 7.0E-29 |
sp|Q9SHG6|STIP1_ARATH | Septin and tuftelin-interacting protein 1 homolog 1 OS=Arabidopsis thaliana GN=STIPL1 PE=2 SV=1 | 232 | 788 | 2.0E-28 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UTK6|YKR3_SCHPO | G-patch domain-containing protein C1486.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1486.03c PE=3 SV=1 | 191 | 789 | 4.0E-44 |
sp|Q6DI35|TFP11_DANRE | Tuftelin-interacting protein 11 OS=Danio rerio GN=tfip11 PE=1 SV=1 | 232 | 789 | 6.0E-31 |
sp|Q66J74|TFP11_XENLA | Tuftelin-interacting protein 11 OS=Xenopus laevis GN=tfip11 PE=2 SV=1 | 39 | 789 | 4.0E-30 |
sp|Q0IIX9|TFP11_XENTR | Tuftelin-interacting protein 11 OS=Xenopus tropicalis GN=tfip11 PE=2 SV=2 | 232 | 789 | 7.0E-29 |
sp|Q9SHG6|STIP1_ARATH | Septin and tuftelin-interacting protein 1 homolog 1 OS=Arabidopsis thaliana GN=STIPL1 PE=2 SV=1 | 232 | 788 | 2.0E-28 |
sp|Q06AK6|TFP11_PIG | Tuftelin-interacting protein 11 OS=Sus scrofa GN=TFIP11 PE=2 SV=1 | 215 | 789 | 5.0E-28 |
sp|Q5R5K8|TFP11_PONAB | Tuftelin-interacting protein 11 OS=Pongo abelii GN=TFIP11 PE=2 SV=1 | 215 | 789 | 6.0E-27 |
sp|A1XD95|TFP11_MACFA | Tuftelin-interacting protein 11 OS=Macaca fascicularis GN=TFIP11 PE=2 SV=1 | 215 | 789 | 1.0E-26 |
sp|A1XD93|TFP11_PANTR | Tuftelin-interacting protein 11 OS=Pan troglodytes GN=TFIP11 PE=2 SV=1 | 215 | 789 | 2.0E-26 |
sp|Q9UBB9|TFP11_HUMAN | Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1 | 215 | 789 | 2.0E-26 |
sp|A1XD94|TFP11_MACMU | Tuftelin-interacting protein 11 OS=Macaca mulatta GN=TFIP11 PE=2 SV=1 | 215 | 789 | 2.0E-26 |
sp|Q5ZII9|TFP11_CHICK | Tuftelin-interacting protein 11 OS=Gallus gallus GN=TFIP11 PE=2 SV=1 | 215 | 789 | 3.0E-26 |
sp|Q9Y103|TFP11_DROME | Septin-interacting protein 1 OS=Drosophila melanogaster GN=sip1 PE=1 SV=1 | 232 | 789 | 3.0E-26 |
sp|A4UMC6|TFP11_MONDO | Tuftelin-interacting protein 11 OS=Monodelphis domestica GN=TFIP11 PE=2 SV=1 | 232 | 789 | 3.0E-26 |
sp|A4UMC5|TFP11_RABIT | Tuftelin-interacting protein 11 OS=Oryctolagus cuniculus GN=TFIP11 PE=2 SV=1 | 215 | 789 | 2.0E-25 |
sp|A1XD97|TFP11_CANLF | Tuftelin-interacting protein 11 OS=Canis lupus familiaris GN=TFIP11 PE=2 SV=1 | 215 | 789 | 2.0E-24 |
sp|Q9ERA6|TFP11_MOUSE | Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1 | 215 | 789 | 4.0E-24 |
sp|Q5U2Y6|TFP11_RAT | Tuftelin-interacting protein 11 OS=Rattus norvegicus GN=Tfip11 PE=1 SV=1 | 215 | 789 | 4.0E-24 |
sp|Q9SLC6|STIP2_ARATH | Septin and tuftelin-interacting protein 1 homolog 2 OS=Arabidopsis thaliana GN=STIPL2 PE=2 SV=1 | 232 | 787 | 4.0E-24 |
sp|Q29RR5|TFP11_BOVIN | Tuftelin-interacting protein 11 OS=Bos taurus GN=TFIP11 PE=2 SV=2 | 215 | 789 | 2.0E-22 |
sp|Q17784|TFP11_CAEEL | Septin and tuftelin-interacting protein 1 homolog OS=Caenorhabditis elegans GN=stip-1 PE=1 SV=2 | 204 | 785 | 1.0E-15 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0003674 | molecular_function | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|3935 MDHFRSGYAFDPSRLNKATAADGSSSDSEDEDDHILPGIGDDDEFAGLNPRKRRRLGGNSKEKAALGIFGSDSDD DGPGKAWKRKNLRKKGVDFVTTAAPTVNSQDDEHDSEDDAPELSGQHIKLAQDESEDSQGGSQDDDDGIGMGFST KKQGLAWQARAKIPKKDNNPARPPASTIKTTFDGTSVLGRGFVPSSEYMATLMADDGAASVPRNKPQPSAFGTKG KINATSFGARMMAKMGYVEGKGLGKEGQGRNIVIEANLRPQGVGLGAVKEKSEQERQEEKRQARLRGEEVIDSDE EQKNKQRKARNRALHSAPNSATATPRRHKTKYLTAEQFKASAPGLHIPDALAPILDMTGPEGKTLTSASAIMTPS SNLPESSELVEARKLVRRAHADLQAFSEEWQSLQERKKGLDQELRERQEQINDARSDFEGLETFVTLVAKELTPE SDWFQVVGFLEKAVSLGAVNTETADLAVAAIHPFLKSSEWDPLAEPQRFASDLRPLSKLLTSWEGENKGQSVDGW NWKAGQTKGIYRRHRKTASPYESMMYKVWLPRMLAAVRDWDALKPDSMLKVVESWKDILPGFVQGQLMDSIEREL ESSLSEWDPRKKGQSHQLPHTWLFPWLQYMPGYHLDPNGTGLVAKVRSKFKKLIDMWQFEWGVVPGLMQWQGVMG EQWRSLIMSHVLPSMGKYLQANFRVEPADQEPYLAVLEGVLGWHELLGDAVMGEVVRENVLPRWLAKLQEWLAGE ADVGEVADWYEWWRVVVLEKLVETEGVGRELDKGLQMMNLV* |
Coding | >OphauG2|3935 ATGGATCATTTTCGGTCGGGCTATGCTTTTGATCCTTCCCGCCTTAACAAAGCAACTGCCGCGGACGGCTCCTCA TCAGATTCCGAAGATGAAGATGACCACATCTTGCCTGGTATTGGCGATGACGATGAATTCGCCGGCTTGAATCCT CGAAAGCGGCGGCGACTCGGAGGCAACAGTAAAGAGAAAGCGGCACTTGGTATTTTCGGCTCTGACAGCGATGAT GATGGGCCGGGCAAGGCGTGGAAGCGAAAAAATCTTAGGAAAAAGGGTGTTGACTTTGTAACGACAGCCGCTCCA ACTGTGAACTCGCAAGATGACGAGCATGATTCGGAGGATGATGCTCCCGAGTTGAGCGGTCAACATATAAAACTA GCTCAAGACGAAAGCGAGGACTCACAAGGGGGCTCGCAAGACGATGATGACGGTATTGGCATGGGCTTTAGCACA AAGAAGCAAGGTTTGGCGTGGCAAGCAAGAGCAAAAATCCCCAAAAAAGACAATAACCCCGCTCGGCCGCCAGCA TCAACTATCAAGACGACCTTTGACGGCACAAGCGTTCTCGGCAGAGGCTTCGTACCTTCTTCGGAATACATGGCA ACGTTGATGGCAGACGACGGCGCTGCTTCGGTTCCCCGAAACAAGCCTCAGCCAAGTGCTTTTGGGACCAAGGGC AAGATCAATGCAACGTCGTTTGGGGCTCGTATGATGGCAAAGATGGGCTATGTCGAGGGCAAGGGTCTCGGCAAA GAGGGCCAGGGCCGGAATATCGTCATCGAGGCCAATTTGCGGCCACAAGGCGTCGGCTTAGGAGCGGTCAAAGAG AAATCGGAACAGGAGCGTCAAGAAGAGAAGCGTCAAGCCCGGCTACGAGGCGAGGAAGTCATTGATTCAGACGAA GAGCAAAAGAACAAGCAGCGAAAAGCTAGGAACAGAGCCCTTCACAGTGCTCCTAACAGCGCAACCGCCACTCCG CGAAGGCACAAGACCAAGTATTTGACAGCTGAGCAATTCAAGGCTTCGGCGCCTGGCTTGCACATTCCAGATGCC CTTGCGCCGATACTTGACATGACAGGCCCAGAAGGAAAGACGCTCACTTCAGCCAGTGCTATCATGACGCCATCG TCAAATCTGCCGGAATCAAGCGAGCTAGTCGAGGCGAGGAAGCTCGTGAGACGGGCACATGCAGATTTACAAGCC TTCTCCGAGGAGTGGCAGAGTCTACAGGAGCGCAAAAAAGGGCTTGATCAAGAGTTGAGAGAGCGACAAGAGCAA ATTAACGACGCAAGATCGGACTTTGAGGGCCTTGAAACTTTTGTGACCTTGGTTGCCAAGGAGCTGACGCCAGAA TCTGACTGGTTTCAGGTCGTTGGCTTTCTTGAAAAAGCTGTGTCACTTGGTGCAGTGAACACAGAGACAGCAGAC TTGGCAGTTGCGGCGATCCATCCGTTTCTCAAGAGTTCAGAGTGGGATCCTTTGGCCGAGCCTCAACGGTTTGCT TCAGACCTGCGCCCTCTTTCAAAACTTTTGACAAGCTGGGAGGGAGAGAACAAAGGCCAATCTGTTGATGGATGG AACTGGAAGGCGGGACAAACAAAGGGCATATACCGCCGACACCGCAAAACAGCATCGCCGTACGAAAGCATGATG TACAAAGTCTGGCTGCCGCGGATGCTGGCAGCAGTTCGAGATTGGGATGCGCTCAAGCCGGATTCTATGCTCAAA GTGGTGGAGAGCTGGAAAGATATTTTGCCCGGATTTGTGCAGGGGCAGCTCATGGATAGCATTGAGCGCGAGCTC GAGTCAAGCTTGTCTGAATGGGATCCACGGAAAAAGGGCCAGAGCCATCAGCTGCCACACACGTGGCTCTTCCCC TGGCTGCAATACATGCCTGGGTATCATCTGGACCCAAATGGAACGGGACTGGTGGCCAAGGTGAGGAGCAAGTTC AAGAAACTCATTGACATGTGGCAGTTTGAATGGGGGGTAGTCCCGGGGCTGATGCAGTGGCAAGGCGTCATGGGG GAGCAATGGCGCTCCTTGATCATGTCGCATGTACTGCCGTCCATGGGCAAGTATCTGCAGGCCAACTTTCGCGTC GAGCCGGCTGATCAGGAGCCCTACCTGGCGGTGCTGGAAGGCGTGCTAGGATGGCATGAGCTGCTGGGGGATGCT GTGATGGGCGAGGTGGTGAGGGAAAATGTGCTGCCTCGGTGGCTCGCCAAGTTGCAAGAGTGGCTGGCGGGTGAA GCCGATGTGGGGGAAGTGGCGGATTGGTATGAGTGGTGGCGAGTGGTGGTGCTCGAGAAGCTGGTAGAGACGGAG GGTGTTGGCAGAGAGCTGGACAAGGGGCTCCAGATGATGAATCTAGTATAG |
Transcript | >OphauG2|3935 ATGGATCATTTTCGGTCGGGCTATGCTTTTGATCCTTCCCGCCTTAACAAAGCAACTGCCGCGGACGGCTCCTCA TCAGATTCCGAAGATGAAGATGACCACATCTTGCCTGGTATTGGCGATGACGATGAATTCGCCGGCTTGAATCCT CGAAAGCGGCGGCGACTCGGAGGCAACAGTAAAGAGAAAGCGGCACTTGGTATTTTCGGCTCTGACAGCGATGAT GATGGGCCGGGCAAGGCGTGGAAGCGAAAAAATCTTAGGAAAAAGGGTGTTGACTTTGTAACGACAGCCGCTCCA ACTGTGAACTCGCAAGATGACGAGCATGATTCGGAGGATGATGCTCCCGAGTTGAGCGGTCAACATATAAAACTA GCTCAAGACGAAAGCGAGGACTCACAAGGGGGCTCGCAAGACGATGATGACGGTATTGGCATGGGCTTTAGCACA AAGAAGCAAGGTTTGGCGTGGCAAGCAAGAGCAAAAATCCCCAAAAAAGACAATAACCCCGCTCGGCCGCCAGCA TCAACTATCAAGACGACCTTTGACGGCACAAGCGTTCTCGGCAGAGGCTTCGTACCTTCTTCGGAATACATGGCA ACGTTGATGGCAGACGACGGCGCTGCTTCGGTTCCCCGAAACAAGCCTCAGCCAAGTGCTTTTGGGACCAAGGGC AAGATCAATGCAACGTCGTTTGGGGCTCGTATGATGGCAAAGATGGGCTATGTCGAGGGCAAGGGTCTCGGCAAA GAGGGCCAGGGCCGGAATATCGTCATCGAGGCCAATTTGCGGCCACAAGGCGTCGGCTTAGGAGCGGTCAAAGAG AAATCGGAACAGGAGCGTCAAGAAGAGAAGCGTCAAGCCCGGCTACGAGGCGAGGAAGTCATTGATTCAGACGAA GAGCAAAAGAACAAGCAGCGAAAAGCTAGGAACAGAGCCCTTCACAGTGCTCCTAACAGCGCAACCGCCACTCCG CGAAGGCACAAGACCAAGTATTTGACAGCTGAGCAATTCAAGGCTTCGGCGCCTGGCTTGCACATTCCAGATGCC CTTGCGCCGATACTTGACATGACAGGCCCAGAAGGAAAGACGCTCACTTCAGCCAGTGCTATCATGACGCCATCG TCAAATCTGCCGGAATCAAGCGAGCTAGTCGAGGCGAGGAAGCTCGTGAGACGGGCACATGCAGATTTACAAGCC TTCTCCGAGGAGTGGCAGAGTCTACAGGAGCGCAAAAAAGGGCTTGATCAAGAGTTGAGAGAGCGACAAGAGCAA ATTAACGACGCAAGATCGGACTTTGAGGGCCTTGAAACTTTTGTGACCTTGGTTGCCAAGGAGCTGACGCCAGAA TCTGACTGGTTTCAGGTCGTTGGCTTTCTTGAAAAAGCTGTGTCACTTGGTGCAGTGAACACAGAGACAGCAGAC TTGGCAGTTGCGGCGATCCATCCGTTTCTCAAGAGTTCAGAGTGGGATCCTTTGGCCGAGCCTCAACGGTTTGCT TCAGACCTGCGCCCTCTTTCAAAACTTTTGACAAGCTGGGAGGGAGAGAACAAAGGCCAATCTGTTGATGGATGG AACTGGAAGGCGGGACAAACAAAGGGCATATACCGCCGACACCGCAAAACAGCATCGCCGTACGAAAGCATGATG TACAAAGTCTGGCTGCCGCGGATGCTGGCAGCAGTTCGAGATTGGGATGCGCTCAAGCCGGATTCTATGCTCAAA GTGGTGGAGAGCTGGAAAGATATTTTGCCCGGATTTGTGCAGGGGCAGCTCATGGATAGCATTGAGCGCGAGCTC GAGTCAAGCTTGTCTGAATGGGATCCACGGAAAAAGGGCCAGAGCCATCAGCTGCCACACACGTGGCTCTTCCCC TGGCTGCAATACATGCCTGGGTATCATCTGGACCCAAATGGAACGGGACTGGTGGCCAAGGTGAGGAGCAAGTTC AAGAAACTCATTGACATGTGGCAGTTTGAATGGGGGGTAGTCCCGGGGCTGATGCAGTGGCAAGGCGTCATGGGG GAGCAATGGCGCTCCTTGATCATGTCGCATGTACTGCCGTCCATGGGCAAGTATCTGCAGGCCAACTTTCGCGTC GAGCCGGCTGATCAGGAGCCCTACCTGGCGGTGCTGGAAGGCGTGCTAGGATGGCATGAGCTGCTGGGGGATGCT GTGATGGGCGAGGTGGTGAGGGAAAATGTGCTGCCTCGGTGGCTCGCCAAGTTGCAAGAGTGGCTGGCGGGTGAA GCCGATGTGGGGGAAGTGGCGGATTGGTATGAGTGGTGGCGAGTGGTGGTGCTCGAGAAGCTGGTAGAGACGGAG GGTGTTGGCAGAGAGCTGGACAAGGGGCTCCAGATGATGAATCTAGTATAG |
Gene | >OphauG2|3935 ATGGATCATTTTCGGTCGGGCTATGCTTTTGATCCTTCCCGCCTTAACAAAGCAACTGCCGCGGACGGCTCCTCA TCAGATTCCGAAGATGAAGATGACCACATCTTGCCTGGTATTGGCGATGACGATGAATTCGCCGGCTTGAATCCT CGAAAGCGGCGGCGACTCGGAGGCAACAGTAAAGAGAAAGCGGCACTTGGTATTTTCGGCTCTGACAGCGATGAT GATGGGCCGGGCAAGGCGTGGAAGCGAAAAAATCTTAGGAAAAAGGGTGTTGACTTTGTAACGACAGCCGCTCCA ACTGTGAACTCGCAAGATGACGAGCATGATTCGGAGGATGATGCTCCCGAGTTGAGCGGTCAACATATAAAACTA GCTCAAGACGAAAGCGAGGACTCACAAGGGGGCTCGCAAGACGATGATGACGGTATTGGCATGGGCTTTAGCACA AAGAAGCAAGGTTTGGCGTGGCAAGCAAGAGCAAAAATCCCCAAAAAAGACAATAACCCCGCTCGGCCGCCAGCA TCAACTATCAAGACGACCTTTGACGGCACAAGCGTTCTCGGCAGAGGCTTCGTACCTTCTTCGGAATACATGGCA ACGTTGATGGCAGACGACGGCGCTGCTTCGGTTCCCCGAAACAAGCCTCAGCCAAGTGCTTTTGGGACCAAGGGC AAGATCAATGCAACGTCGTTTGGGGCTCGTATGATGGCAAAGATGGGCTATGTCGAGGGCAAGGGTCTCGGCAAA GAGGGCCAGGGCCGGAATATCGTCATCGAGGCCAATTTGCGGCCACAAGGCGTCGGCTTAGGAGCGGTCAAAGAG AAATCGGAACAGGAGCGTCAAGAAGAGAAGCGTCAAGCCCGGCTACGAGGCGAGGAAGTCATTGATTCAGACGAA GAGCAAAAGAACAAGCAGCGAAAAGCTAGGAACAGAGCCCTTCACAGTGCTCCTAACAGCGCAACCGCCACTCCG CGAAGGCACAAGACCAAGTATTTGACAGCTGAGCAATTCAAGGCTTCGGCGCCTGGCTTGCACATTCCAGATGCC CTTGCGCCGATACTTGACATGACAGGCCCAGAAGGAAAGACGCTCACTTCAGCCAGTGCTATCATGACGCCATCG TCAAATCTGCCGGAATCAAGCGAGCTAGTCGAGGCGAGGAAGCTCGTGAGACGGGCACATGCAGATTTACAAGCC TTCTCCGAGGAGTGGCAGAGTCTACAGGAGCGCAAAAAAGGGCTTGATCAAGAGTTGAGAGAGCGACAAGAGCAA ATTAACGACGCAAGATCGGACTTTGAGGGCCTTGAAACTTTTGTGACCTTGGTTGCCAAGGAGCTGACGCCAGAA TCTGACTGGTTTCAGGTCGTTGGCTTTCTTGAAAAAGCTGTGTCACTTGGTGCAGTGAACACAGAGACAGCAGAC TTGGCAGTTGCGGCGATCCATCCGTTTCTCAAGAGTTCAGAGTGGGATCCTTTGGCCGAGCCTCAACGGTTTGCT TCAGACCTGCGCCCTCTTTCAAAACTTTTGACAAGCTGGGAGGGAGAGAACAAAGGCCAATCTGTTGATGGATGG AACTGGAAGGCGGGACAAACAAAGGGCATATACCGCCGACACCGCAAAACAGCATCGCCGTACGAAAGCATGATG TACAAAGTCTGGCTGCCGCGGATGCTGGCAGCAGTTCGAGATTGGGATGCGCTCAAGCCGGATTCTATGCTCAAA GTGGTGGAGAGCTGGAAAGATATTTTGCCCGGATTTGTGCAGGGGCAGCTCATGGATAGCATTGAGCGCGAGCTC GAGTCAAGCTTGTCTGAATGGGATCCACGGAAAAAGGGCCAGAGCCATCAGCTGCCACACACGTGGCTCTTCCCC TGGCTGCAATACATGCCTGGGTATCATCTGGACCCAAATGGAACGGGACTGGTGGCCAAGGTGAGGAGCAAGTTC AAGAAACTCATTGACATGTGGCAGTTTGAATGGGGGGTAGTCCCGGGGCTGATGCAGTGGCAAGGCGTCATGGGG GAGCAATGGCGCTCCTTGATCATGTCGCATGTACTGCCGTCCATGGGCAAGTATCTGCAGGCCAACTTTCGCGTC GAGCCGGCTGATCAGGAGCCCTACCTGGCGGTGCTGGAAGGCGTGCTAGGATGGCATGAGCTGCTGGGGGATGCT GTGATGGGCGAGGTGGTGAGGGAAAATGTGCTGCCTCGGTGGCTCGCCAAGTTGCAAGAGTGGCTGGCGGGTGAA GCCGATGTGGGGGAAGTGGCGGATTGGTATGAGTGGTGGCGAGTGGTGGTGCTCGAGAAGCTGGTAGAGACGGAG GGTGTTGGCAGAGAGCTGGACAAGGGGCTCCAGATGATGAATCTAGTATAG |