Protein ID | OphauG2|391 |
Gene name | |
Location | Contig_109:17473..19056 |
Strand | - |
Gene length (bp) | 1583 |
Transcript length (bp) | 1449 |
Coding sequence length (bp) | 1449 |
Protein length (aa) | 483 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q54PR9|CF60_DICDI | Counting factor 60 OS=Dictyostelium discoideum GN=cf60 PE=1 SV=1 | 82 | 437 | 1.0E-13 |
sp|Q0IHQ9|PXYP1_XENTR | 2-phosphoxylose phosphatase 1 OS=Xenopus tropicalis GN=pxylp1 PE=2 SV=1 | 65 | 437 | 2.0E-08 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 28 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 2 | 21 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|391 MASLVWGFSLALAALAWLLLLPSSVRGVEWQPPLQSRLNNLTWALHGSGVNGFIYNSSYTPPDRYGAYNWCNMPH VRRAEYPQPGPEWELHYVELMHRHHKRTPYPSNGFPIEPYPWNCDDVRLSLRAQPLPGPEPVAAHRQVFESGVNP FVSPGWTGTCSFPQITAQGLLDSWQHGADLYAVYHDLLGLVPASESSQFASAVRYRVTNNVITSQVAAMVVSAMW KSPNEIESLPLLVQAPGIDSLEPQYNCPSSSKLFDDIKSDASWRQHLNASANLFRTLDAISGVPGSDVGFHASLD HYYDNLSARQCHEKPLPCSTTSVTCITQELADTVYRIGNWEYSQLYRDHPLSLPASAASLGVWIGELTTHLRHVI AGRQHDVVYYHNVAHDGSVSRLLSILQVDQMVWPGMGAEVVFELWRHKESEAFFVRVLYGGKILRSSHPDLGLMD MLPAEDVLGYLEDLVGQGASRVKARCQEQKKL* |
Coding | >OphauG2|391 ATGGCTTCACTTGTCTGGGGCTTTTCGCTGGCCCTGGCTGCGCTGGCATGGCTGTTATTGCTGCCCAGCAGTGTC CGAGGCGTCGAGTGGCAGCCGCCGTTGCAGTCGCGTCTAAACAACCTCACGTGGGCGCTCCATGGCAGTGGCGTC AATGGCTTCATCTACAACTCGTCGTACACGCCGCCCGACCGCTATGGCGCCTACAACTGGTGCAATATGCCCCAT GTTCGCCGCGCCGAGTACCCTCAGCCAGGCCCCGAATGGGAACTGCACTATGTCGAGTTGATGCACAGGCACCAC AAGCGCACTCCCTATCCCTCCAATGGCTTTCCCATCGAGCCATACCCCTGGAACTGCGACGACGTCCGGCTCTCT CTTCGCGCTCAGCCTCTGCCCGGTCCAGAGCCTGTGGCTGCCCATCGCCAGGTCTTTGAGTCGGGCGTGAATCCC TTTGTGTCCCCGGGCTGGACTGGCACTTGCTCCTTTCCGCAAATCACAGCCCAAGGTTTGCTCGACTCTTGGCAG CATGGCGCCGATCTCTACGCCGTCTATCATGACCTGCTTGGCCTCGTGCCAGCCAGTGAGTCGAGCCAATTTGCC TCTGCCGTTCGTTACCGCGTCACAAACAACGTCATCACCAGCCAAGTCGCCGCCATGGTGGTAAGTGCCATGTGG AAGTCGCCAAATGAAATTGAGTCGTTGCCGCTCCTTGTCCAGGCCCCGGGCATCGATAGCCTAGAACCGCAGTAC AATTGTCCATCGTCCAGCAAACTCTTTGATGATATCAAGTCCGATGCTTCTTGGCGGCAGCACCTCAACGCCTCA GCCAACCTTTTTCGCACTCTTGACGCCATCTCAGGGGTGCCCGGGTCCGATGTCGGCTTTCATGCTTCCCTTGAC CATTATTACGACAATTTGTCGGCTCGTCAGTGCCACGAAAAGCCGCTGCCGTGTTCCACCACCTCTGTGACATGC ATCACTCAAGAGCTCGCCGATACTGTTTACCGAATCGGCAACTGGGAGTATAGCCAATTGTATCGCGACCATCCA TTGTCACTGCCAGCGAGCGCAGCCTCTTTGGGCGTGTGGATTGGAGAGCTGACCACACATTTGCGTCACGTCATT GCCGGCCGACAGCACGACGTCGTTTACTATCACAATGTGGCTCACGATGGCTCAGTCTCGCGTTTGCTCTCCATC CTGCAAGTTGACCAAATGGTGTGGCCCGGTATGGGTGCCGAGGTCGTGTTTGAGCTGTGGCGGCACAAAGAGTCG GAGGCTTTTTTCGTACGCGTGCTCTATGGAGGCAAGATACTGCGCTCGTCCCATCCTGACTTGGGGCTCATGGAC ATGTTGCCGGCTGAAGATGTTCTGGGATATTTGGAAGATCTTGTCGGGCAAGGCGCCAGTCGAGTCAAGGCCAGA TGCCAAGAGCAGAAGAAGCTATAG |
Transcript | >OphauG2|391 ATGGCTTCACTTGTCTGGGGCTTTTCGCTGGCCCTGGCTGCGCTGGCATGGCTGTTATTGCTGCCCAGCAGTGTC CGAGGCGTCGAGTGGCAGCCGCCGTTGCAGTCGCGTCTAAACAACCTCACGTGGGCGCTCCATGGCAGTGGCGTC AATGGCTTCATCTACAACTCGTCGTACACGCCGCCCGACCGCTATGGCGCCTACAACTGGTGCAATATGCCCCAT GTTCGCCGCGCCGAGTACCCTCAGCCAGGCCCCGAATGGGAACTGCACTATGTCGAGTTGATGCACAGGCACCAC AAGCGCACTCCCTATCCCTCCAATGGCTTTCCCATCGAGCCATACCCCTGGAACTGCGACGACGTCCGGCTCTCT CTTCGCGCTCAGCCTCTGCCCGGTCCAGAGCCTGTGGCTGCCCATCGCCAGGTCTTTGAGTCGGGCGTGAATCCC TTTGTGTCCCCGGGCTGGACTGGCACTTGCTCCTTTCCGCAAATCACAGCCCAAGGTTTGCTCGACTCTTGGCAG CATGGCGCCGATCTCTACGCCGTCTATCATGACCTGCTTGGCCTCGTGCCAGCCAGTGAGTCGAGCCAATTTGCC TCTGCCGTTCGTTACCGCGTCACAAACAACGTCATCACCAGCCAAGTCGCCGCCATGGTGGTAAGTGCCATGTGG AAGTCGCCAAATGAAATTGAGTCGTTGCCGCTCCTTGTCCAGGCCCCGGGCATCGATAGCCTAGAACCGCAGTAC AATTGTCCATCGTCCAGCAAACTCTTTGATGATATCAAGTCCGATGCTTCTTGGCGGCAGCACCTCAACGCCTCA GCCAACCTTTTTCGCACTCTTGACGCCATCTCAGGGGTGCCCGGGTCCGATGTCGGCTTTCATGCTTCCCTTGAC CATTATTACGACAATTTGTCGGCTCGTCAGTGCCACGAAAAGCCGCTGCCGTGTTCCACCACCTCTGTGACATGC ATCACTCAAGAGCTCGCCGATACTGTTTACCGAATCGGCAACTGGGAGTATAGCCAATTGTATCGCGACCATCCA TTGTCACTGCCAGCGAGCGCAGCCTCTTTGGGCGTGTGGATTGGAGAGCTGACCACACATTTGCGTCACGTCATT GCCGGCCGACAGCACGACGTCGTTTACTATCACAATGTGGCTCACGATGGCTCAGTCTCGCGTTTGCTCTCCATC CTGCAAGTTGACCAAATGGTGTGGCCCGGTATGGGTGCCGAGGTCGTGTTTGAGCTGTGGCGGCACAAAGAGTCG GAGGCTTTTTTCGTACGCGTGCTCTATGGAGGCAAGATACTGCGCTCGTCCCATCCTGACTTGGGGCTCATGGAC ATGTTGCCGGCTGAAGATGTTCTGGGATATTTGGAAGATCTTGTCGGGCAAGGCGCCAGTCGAGTCAAGGCCAGA TGCCAAGAGCAGAAGAAGCTATAG |
Gene | >OphauG2|391 ATGGCTTCACTTGTCTGGGGCTTTTCGCTGGCCCTGGCTGCGCTGGCATGGCTGTTATTGCTGCCCAGCAGTGTC CGAGGCGTCGAGTGGCAGCCGCCGTTGCAGTCGCGTCTAAACAACCTCACGTGGGCGCTCCATGGCAGTGGCGTC AATGGCTTCATCTACAACTCGTCGTACACGCCGCCCGACCGCTATGGCGCCTACAACTGGTGCAATATGCCCCAT GTTCGCCGCGCCGAGTACCCTCAGCCAGGCCCCGAATGGGAACTGCACTATGTCGAGTTGGTGTGTCAGGCTCAT TGCCCTCTTGCCGTGGCTCGGGCCGCCTCCAAAGGGTTAACGCTGGCACGTGTTCTAGATGCACAGGCACCACAA GCGCACTCCCTATCCCTCCAATGGCTTTCCCATCGAGCCATACCCCTGGAACTGCGACGACGTCCGGCTCTCTCT TCGCGCTCAGCCTCTGCCCGGTCCAGAGCCTGTGGCTGCCCATCGCCAGGTCTTTGAGTCGGGCGTGAATCCCTT TGTGTCCCCGGGCTGGACTGGCACTTGCTCCTTTCCGCAAATCACAGCCCAAGGTTTGCTCGACTCTTGGCAGCA TGGCGCCGATCTCTACGCCGTCTATCATGACCTGCTTGGCCTCGTGCCAGCCAGTGAGTCGAGCCAATTTGCCTC TGCCGTTCGTTACCGCGTCACAAACAACGTCATCACCAGCCAAGTCGCCGCCATGGTGGTAAGTGCCATGTGGAA GTCGCCAAATGAAATTGAGTCGTTGCCGCTCCTTGTCCAGGTATGTCGCAGCTAGTCACCGCCACCGCAGCGCCC TCTGATTTCGCCTCGTCTGTTTGCAGGCCCCGGGCATCGATAGCCTAGAACCGCAGTACAATTGTCCATCGTCCA GCAAACTCTTTGATGATATCAAGTCCGATGCTTCTTGGCGGCAGCACCTCAACGCCTCAGCCAACCTTTTTCGCA CTCTTGACGCCATCTCAGGGGTGCCCGGGTCCGATGTCGGCTTTCATGCTTCCCTTGACCATTATTACGACAATT TGTCGGCTCGTCAGTGCCACGAAAAGCCGCTGCCGTGTTCCACCACCTCTGTGACATGCATCACTCAAGAGCTCG CCGATACTGTTTACCGAATCGGCAACTGGGAGTATAGCCAATTGTATCGCGACCATCCATTGTCACTGCCAGCGA GCGCAGCCTCTTTGGGCGTGTGGATTGGAGAGCTGACCACACATTTGCGTCACGTCATTGCCGGCCGACAGCACG ACGTCGTTTACTATCACAATGTGGCTCACGATGGCTCAGTCTCGCGTTTGCTCTCCATCCTGCAAGTTGACCAAA TGGTGTGGCCCGGTATGGGTGCCGAGGTCGTGTTTGAGCTGTGGCGGCACAAAGAGTCGGAGGCTTTTTTCGTAC GCGTGCTCTATGGAGGCAAGATACTGCGCTCGTCCCATCCTGACTTGGGGCTCATGGACATGTTGCCGGCTGAAG ATGTTCTGGGATATTTGGAAGATCTTGTCGGGCAAGGCGCCAGTCGAGTCAAGGCCAGATGCCAAGAGCAGAAGA AGCTATAG |