Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3895
Gene name
Location	Contig_305:13739..14860
Strand	+
Gene length (bp)	1121
Transcript length (bp)	1065
Coding sequence length (bp)	1065
Protein length (aa)	355

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07766	LETM1_RBD	LETM1-like, RBD	2.1E-09	263	323

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	161	183	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3895 MIVRSQAWRQCHGLATTTSPCRWNGPLAATAQLRLLHQSHRLGKADSGPRPPDSPSSQATANPLVNPPASTRPPP LISPDSSAFESRPRYYLELAKTYLRFYRDGLKGVWTSRSLLRQKLARTPADDRPSLMRPDYVPRSFSRADWVLLW RVRHDLLRLPLFGLVMLVFGELTPLVVIVMDGVVPYTCRIPRQVQKGLQGAEQRRQRAFQQLESRCPHGPLSPNL TPRLAQAHVLRTLDLAGHVWDSVGFIPPGIWHVKGNLRMAFLMGDDINLVQDGGVTGLMPDELRIACSDRGIDVL GKSNTELRLWLGDWLRLTASSSRQDRRRRMATLMLTRPENWPQNRNFAVPGWDM*
Coding	>OphauG2\|3895 ATGATTGTGCGGAGCCAGGCGTGGCGGCAATGCCATGGCCTTGCAACCACCACGTCGCCATGCCGCTGGAATGGA CCGCTTGCTGCCACAGCTCAGTTGCGCCTCTTGCACCAGTCGCATCGCCTTGGCAAAGCCGACTCTGGCCCCAGG CCCCCCGACTCGCCGTCCTCACAAGCCACTGCAAATCCGCTCGTCAATCCTCCAGCGTCGACGCGGCCACCGCCC TTGATCTCGCCCGACTCAAGCGCCTTTGAATCGCGGCCACGATACTACTTGGAGCTTGCCAAGACCTATCTCCGC TTCTACAGGGATGGCCTCAAGGGCGTCTGGACCAGCCGCAGCCTTTTGCGCCAGAAACTGGCCCGCACGCCCGCC GACGACCGCCCCTCGCTGATGCGGCCTGACTACGTGCCGCGCTCCTTTTCTCGCGCCGACTGGGTGCTGCTGTGG CGCGTGCGTCACGACCTCTTGCGTCTGCCGCTGTTTGGCCTCGTCATGCTCGTGTTTGGCGAGCTGACGCCCCTC GTCGTCATCGTCATGGACGGCGTCGTGCCCTACACGTGCCGCATTCCGCGCCAGGTCCAAAAGGGACTGCAAGGC GCTGAGCAACGCCGCCAGAGAGCCTTTCAGCAGCTCGAGTCAAGATGCCCCCACGGCCCCTTGAGCCCCAACCTC ACGCCTCGCCTAGCCCAAGCTCATGTTCTGCGCACCCTGGACCTCGCTGGCCATGTCTGGGACAGCGTCGGCTTC ATCCCGCCTGGCATCTGGCACGTCAAGGGCAATCTTCGCATGGCCTTTCTCATGGGCGACGACATCAATCTCGTC CAAGACGGCGGAGTCACGGGTCTGATGCCTGACGAGCTGCGAATCGCCTGCTCGGACCGCGGCATTGATGTGCTG GGCAAGAGCAACACCGAGTTGCGCCTCTGGCTGGGCGACTGGCTCAGACTCACGGCCTCGAGCAGCAGACAGGAT AGAAGACGCCGCATGGCAACCCTCATGTTGACCAGACCCGAGAACTGGCCTCAAAATCGTAATTTTGCCGTGCCC GGCTGGGACATGTAA
Transcript	>OphauG2\|3895 ATGATTGTGCGGAGCCAGGCGTGGCGGCAATGCCATGGCCTTGCAACCACCACGTCGCCATGCCGCTGGAATGGA CCGCTTGCTGCCACAGCTCAGTTGCGCCTCTTGCACCAGTCGCATCGCCTTGGCAAAGCCGACTCTGGCCCCAGG CCCCCCGACTCGCCGTCCTCACAAGCCACTGCAAATCCGCTCGTCAATCCTCCAGCGTCGACGCGGCCACCGCCC TTGATCTCGCCCGACTCAAGCGCCTTTGAATCGCGGCCACGATACTACTTGGAGCTTGCCAAGACCTATCTCCGC TTCTACAGGGATGGCCTCAAGGGCGTCTGGACCAGCCGCAGCCTTTTGCGCCAGAAACTGGCCCGCACGCCCGCC GACGACCGCCCCTCGCTGATGCGGCCTGACTACGTGCCGCGCTCCTTTTCTCGCGCCGACTGGGTGCTGCTGTGG CGCGTGCGTCACGACCTCTTGCGTCTGCCGCTGTTTGGCCTCGTCATGCTCGTGTTTGGCGAGCTGACGCCCCTC GTCGTCATCGTCATGGACGGCGTCGTGCCCTACACGTGCCGCATTCCGCGCCAGGTCCAAAAGGGACTGCAAGGC GCTGAGCAACGCCGCCAGAGAGCCTTTCAGCAGCTCGAGTCAAGATGCCCCCACGGCCCCTTGAGCCCCAACCTC ACGCCTCGCCTAGCCCAAGCTCATGTTCTGCGCACCCTGGACCTCGCTGGCCATGTCTGGGACAGCGTCGGCTTC ATCCCGCCTGGCATCTGGCACGTCAAGGGCAATCTTCGCATGGCCTTTCTCATGGGCGACGACATCAATCTCGTC CAAGACGGCGGAGTCACGGGTCTGATGCCTGACGAGCTGCGAATCGCCTGCTCGGACCGCGGCATTGATGTGCTG GGCAAGAGCAACACCGAGTTGCGCCTCTGGCTGGGCGACTGGCTCAGACTCACGGCCTCGAGCAGCAGACAGGAT AGAAGACGCCGCATGGCAACCCTCATGTTGACCAGACCCGAGAACTGGCCTCAAAATCGTAATTTTGCCGTGCCC GGCTGGGACATGTAA
Gene	>OphauG2\|3895 ATGATTGTGCGGAGCCAGGCGTGGCGGCAATGCCATGGCCTTGCAACCACCACGTCGCCATGCCGCTGGAATGGA CCGCTTGCTGCCACAGCTCAGTTGCGCCTCTTGCACCAGTCGCATCGCCTTGGCAAAGCCGACTCTGGCCCCAGG CCCCCCGACTCGCCGTCCTCACAAGCCACTGCAAATCCGCTCGTCAATCCTCCAGCGTCGACGCGGCCACCGCCC TTGATCTCGCCCGACTCAAGCGCCTTTGAATCGCGGCCACGATACTACTTGGAGCTTGCCAAGACCTATCTCCGC TTCTACAGGGATGGCCTCAAGGGCGTCTGGACCAGCCGCAGCCTTTTGCGCCAGAAACTGGCCCGCACGCCCGCC GACGACCGCCCCTCGCTGATGCGGCCTGACTACGTGCCGCGCTCCTTTTCTCGCGCCGACTGGGTGCTGCTGTGG CGCGTGCGTCACGACCTCTTGCGTCTGCCGCTGTTTGGCCTCGTCATGCTCGTGTTTGGCGAGCTGACGCCCCTC GTCGTCATCGTCATGGACGGCGTCGTGCCCTACACGTGCCGCATTCCGCGCCAGGTCCAAAAGGGACTGCAAGGC GCTGAGCAACGCCGCCAGAGAGCCTTTCAGCAGCTCGAGTCAAGATGCCCCCACGGCCCCTTGAGCCCCAACCTC ACGCCTCGCCTAGCCCAAGCTCATGTTCTGCGCACCCTGGACCTCGCTGGCCATGTCTGGGACAGCGTCGGCTTC ATCCCGCCTGGCATCTGGCACGTCAAGGGCAATCTTCGCATGGCCTTTCTCATGGGCGACGACATCAATCTCGTC CAAGACGGCGGAGTCACGGGTCTGATGCCTGACGAGCTGCGAATCGCCTGCTCGGACCGCGGCATTGATGTGCTG GGCAAGAGCAACACCGAGTTGCGCCTCTGGCTGGGCGACTGGCTCAGACTCACGGCCTCGAGCAGCAGACAGGAT AGAAGACGCCGCATGGCAACCCTCATGTTGACCAGGTAACAAGGCTTCCAGCTCGCCCGCTGCCTTGACAAAAAA CTGACGCTGCATGCAGACCCGAGAACTGGCCTCAAAATCGTAATTTTGCCGTGCCCGGCTGGGACATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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