Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3859
Gene name
Location	Contig_301:2407..3980
Strand	-
Gene length (bp)	1573
Transcript length (bp)	1473
Coding sequence length (bp)	1473
Protein length (aa)	491

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01490	Aa_trans	Transmembrane amino acid transporter protein	3.5E-52	76	468

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38680\|MTR_NEUCR	N amino acid transport system protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mtr PE=3 SV=2	60	490	0.0E+00

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	75	94	19
2	99	121	22
3	154	176	22
4	186	208	22
5	215	237	22
6	257	276	19
7	296	318	22
8	338	360	22
9	380	402	22
10	407	429	22
11	450	472	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3859 MTDLSYAPVQADSGSEKKQGLDKVASASNNIGQPTSSDSGMTGGAIAGEISEFEERRADMDKEKAAQGAAHFNRL GWKRLTIVLIVEAIALGSLSLPAAFATLGMVAGVFCSVGLGLVAIYTSDIVGKVKLKYPHVAHYADAGRLLAGRF GYELFGAMFVLQLTFLVGSHCLTGTIAFLNITNNGACSVVFGVVSAIILLALAIPPSFAEVAILGYIDFVSILAA IGVTIIATGIVAGKQDGGLSAVNWSAWPKEGVTFADAFIAISNIVFAYSFCMCQFSFMDEMHTPSDYVKSIWALG GIEIGIYTITGALVYSFVGVDVKSPSLLSAGTLVSKVAFGLALPVIFISGSINTTVIGRYIHGRIFKNSVTRFIN TPRGWITWLAVISVITLAAFIIAEVIPFFSDLLSISSSLFVTGFSYYLPALMWYKLIREGPWYARHNLLHSACSG LSFIIGVVTLVCGTYGSIVDIIHQYDKGTVRGVFTCAPIA*
Coding	>OphauG2\|3859 ATGACGGATCTTAGCTACGCGCCCGTCCAGGCCGACTCTGGGTCGGAGAAGAAGCAGGGCCTGGACAAGGTGGCG TCGGCGTCGAACAACATTGGCCAACCGACATCGTCAGACAGCGGCATGACGGGAGGCGCCATTGCTGGCGAGATT AGCGAGTTTGAGGAGCGGAGAGCAGACATGGACAAGGAAAAGGCAGCCCAGGGCGCAGCACACTTCAACCGCCTC GGCTGGAAACGACTCACCATTGTCCTGATTGTCGAAGCCATTGCCCTCGGCAGTCTGAGTTTGCCAGCCGCCTTT GCCACGCTCGGCATGGTTGCTGGTGTCTTTTGCTCCGTTGGCCTCGGCCTCGTGGCCATTTATACGAGCGACATT GTTGGCAAGGTCAAGCTTAAATATCCTCATGTCGCTCACTACGCCGATGCCGGCCGTCTCCTCGCCGGCAGATTT GGCTACGAATTGTTTGGCGCCATGTTTGTCCTGCAGCTCACCTTTCTCGTCGGCTCGCACTGCCTGACGGGCACC ATTGCCTTTCTCAACATCACCAACAATGGTGCCTGTTCCGTCGTCTTTGGTGTCGTTTCCGCCATTATCCTGCTT GCCCTGGCAATTCCGCCTTCGTTTGCCGAGGTGGCTATTCTCGGATATATTGATTTCGTCTCGATTCTTGCCGCC ATTGGGGTCACTATTATCGCCACGGGTATTGTTGCCGGCAAGCAGGACGGCGGACTCTCTGCTGTTAACTGGTCT GCCTGGCCCAAGGAGGGCGTCACGTTTGCCGACGCCTTCATCGCCATTAGCAACATTGTCTTTGCCTACAGCTTC TGCATGTGTCAATTCAGCTTTATGGACGAGATGCATACCCCTAGCGACTATGTCAAGTCCATCTGGGCCCTCGGT GGCATTGAAATCGGCATCTATACAATTACTGGCGCCCTCGTCTACTCGTTTGTCGGCGTCGATGTTAAATCGCCC TCGCTCCTGTCCGCCGGCACGCTCGTTTCAAAGGTTGCCTTTGGCCTCGCCCTGCCCGTCATCTTCATCTCAGGC TCAATCAACACCACCGTCATTGGCCGCTACATCCACGGGCGTATATTCAAAAACTCGGTCACGCGCTTCATCAAC ACGCCTCGCGGTTGGATTACATGGCTCGCCGTCATTAGCGTCATTACTCTGGCTGCCTTTATCATTGCCGAGGTT ATACCGTTTTTCAGCGACTTGCTCTCGATTTCGTCGTCGCTTTTCGTCACGGGCTTTAGCTACTACTTGCCGGCT CTTATGTGGTATAAGCTGATTCGCGAGGGTCCCTGGTACGCGCGCCACAACCTATTGCACTCTGCCTGCAGCGGC TTGTCCTTTATCATTGGCGTTGTGACGCTCGTGTGCGGGACATATGGCAGCATTGTCGATATTATTCACCAATAC GACAAGGGCACCGTCCGCGGCGTCTTTACCTGTGCGCCAATTGCATAG
Transcript	>OphauG2\|3859 ATGACGGATCTTAGCTACGCGCCCGTCCAGGCCGACTCTGGGTCGGAGAAGAAGCAGGGCCTGGACAAGGTGGCG TCGGCGTCGAACAACATTGGCCAACCGACATCGTCAGACAGCGGCATGACGGGAGGCGCCATTGCTGGCGAGATT AGCGAGTTTGAGGAGCGGAGAGCAGACATGGACAAGGAAAAGGCAGCCCAGGGCGCAGCACACTTCAACCGCCTC GGCTGGAAACGACTCACCATTGTCCTGATTGTCGAAGCCATTGCCCTCGGCAGTCTGAGTTTGCCAGCCGCCTTT GCCACGCTCGGCATGGTTGCTGGTGTCTTTTGCTCCGTTGGCCTCGGCCTCGTGGCCATTTATACGAGCGACATT GTTGGCAAGGTCAAGCTTAAATATCCTCATGTCGCTCACTACGCCGATGCCGGCCGTCTCCTCGCCGGCAGATTT GGCTACGAATTGTTTGGCGCCATGTTTGTCCTGCAGCTCACCTTTCTCGTCGGCTCGCACTGCCTGACGGGCACC ATTGCCTTTCTCAACATCACCAACAATGGTGCCTGTTCCGTCGTCTTTGGTGTCGTTTCCGCCATTATCCTGCTT GCCCTGGCAATTCCGCCTTCGTTTGCCGAGGTGGCTATTCTCGGATATATTGATTTCGTCTCGATTCTTGCCGCC ATTGGGGTCACTATTATCGCCACGGGTATTGTTGCCGGCAAGCAGGACGGCGGACTCTCTGCTGTTAACTGGTCT GCCTGGCCCAAGGAGGGCGTCACGTTTGCCGACGCCTTCATCGCCATTAGCAACATTGTCTTTGCCTACAGCTTC TGCATGTGTCAATTCAGCTTTATGGACGAGATGCATACCCCTAGCGACTATGTCAAGTCCATCTGGGCCCTCGGT GGCATTGAAATCGGCATCTATACAATTACTGGCGCCCTCGTCTACTCGTTTGTCGGCGTCGATGTTAAATCGCCC TCGCTCCTGTCCGCCGGCACGCTCGTTTCAAAGGTTGCCTTTGGCCTCGCCCTGCCCGTCATCTTCATCTCAGGC TCAATCAACACCACCGTCATTGGCCGCTACATCCACGGGCGTATATTCAAAAACTCGGTCACGCGCTTCATCAAC ACGCCTCGCGGTTGGATTACATGGCTCGCCGTCATTAGCGTCATTACTCTGGCTGCCTTTATCATTGCCGAGGTT ATACCGTTTTTCAGCGACTTGCTCTCGATTTCGTCGTCGCTTTTCGTCACGGGCTTTAGCTACTACTTGCCGGCT CTTATGTGGTATAAGCTGATTCGCGAGGGTCCCTGGTACGCGCGCCACAACCTATTGCACTCTGCCTGCAGCGGC TTGTCCTTTATCATTGGCGTTGTGACGCTCGTGTGCGGGACATATGGCAGCATTGTCGATATTATTCACCAATAC GACAAGGGCACCGTCCGCGGCGTCTTTACCTGTGCGCCAATTGCATAG
Gene	>OphauG2\|3859 ATGACGGATCTTAGCTACGCGCCCGTCCAGGCCGACTCTGGGTCGGAGAAGAAGCAGGGCCTGGACAAGGTGGCG TCGGCGTCGAACAACATTGGCCAACCGACATCGTCAGACAGCGGCATGACGGGAGGCGCCATTGCTGGCGAGATT AGCGAGTTTGAGGAGCGGAGAGCAGACATGGACAAGGAAAAGGCAGCCCAGGGCGCAGCACACTTCAACCGCCTC GGCTGGAAACGACTCACCATTGTCCTGATTGTCGAAGCCATTGCCCTCGGCAGTCTGAGTTTGCCAGCCGCCTTT GCCACGCTCGGCATGGTTGCTGGTGTCTTTTGCTCCGTTGGCCTCGGCCTCGTGGCCATTTATACGAGCGACATT GTTGGCAAGGTCAAGCTTAAATATCCTCATGTCGCTCACTACGCCGATGCCGGCCGTCTCCTCGCCGGCAGATTT GGCTACGAATTGTTTGGCGCCATGTTTGTCCTGCAGCTCACCTTTCTCGTCGGCTCGCACTGCCTGACGGGCACC ATTGCCTTTCTCAACATCACCAACAATGGTGCCTGTTCCGTCGTCTTTGGTGTCGTTTCCGCCATTATCCTGCTT GCCCTGGCAATTCCGCCTTCGTTTGCCGAGGTGGCTATTCTCGGATATATTGATTTCGTCTCGATTCTTGCCGCC ATTGGGGTCACTATTATCGCCACGGGTATTGTTGCCGGCAAGCAGGACGGCGGACTCTCTGCTGTTAACTGGTCT GCCTGGCCCAAGGAGGGCGTCACGTTTGCCGACGCCTTCATCGCCATTAGCAACATTGTCTTTGCCTACAGCTTC TGCATGTGTCAATTCAGCTTTATGGACGAGATGCATACCCCTAGCGACTATGTCAAGTCCATCTGGGCCCTCGGT GGCATTGAAATCGGCATCTATACAATTACTGGCGCCCTCGTCTACTCGTTTGTCGGCGTCGATGTTAAATCGCCC TCGCTCCTGTCCGCCGGCACGCTCGTTTCAAAGGTTGCCTTTGGCCTCGCCCTGCCCGTCATCTTCATCTCAGGC TCAATCAACACCACCGTCATTGGCCGCTACATCCACGGGCGTATATTCAAAAACTCGGTCACGCGCTTCATCAAC ACGCCTCGCGGTTGGATTACATGGCTCGCCGTCATTAGCGTCATTACTCTGGCTGCCTTTATCATTGCCGAGGTT ATACCGTTTTTCAGCGACTTGCTCTCGATTTCGTCGTCGCTTTTCGTCACGGGCTTTAGCTACTACTTGCCGGCT CTTATGTGGTATAAGCTGATTCGCGAGGGTCCCTGGTACGCGCGCCACAACCTATTGCACTCTGCCTGCAGCGGC TTGTCCTTTATCATTGGCGTTGTGACGCTCGTGTGCGGGACATATGGCAGCATTGTCGATATTGTAAGCCCGTCC CCCCAACCCCCCCTTTTTCTCTTTGATTGTCTTGAAAATACACCTTCAAGGTGAAACTAGTCTTCTAACCCGCCA TTTTCTCCTGCAGATTCACCAATACGACAAGGGCACCGTCCGCGGCGTCTTTACCTGTGCGCCAATTGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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