© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3810 |
| Gene name | |
| Location | Contig_3:28477..28942 |
| Strand | + |
| Gene length (bp) | 465 |
| Transcript length (bp) | 294 |
| Coding sequence length (bp) | 294 |
| Protein length (aa) | 98 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08122 | NDUF_B12 | NADH-ubiquinone oxidoreductase B12 subunit family | 4.4E-25 | 35 | 87 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022900 | electron transport chain | Yes |
| GO:0005739 | mitochondrion | Yes |
| GO:0043229 | intracellular organelle | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0043226 | organelle | No |
| GO:0006091 | generation of precursor metabolites and energy | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0008152 | metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 58 | 80 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3810 MLPTRVLRAAKGSKANITGFNLRDFRASGAIKRYDPWARAEAWRSEGHFSRYNRFKNALPGLGIGSAAFAAYCVY EHFFLQDEHHHGQDDHAQETSH* |
| Coding | >OphauG2|3810 ATGCTTCCCACTCGCGTCCTGCGCGCCGCAAAGGGCTCCAAGGCCAACATCACCGGCTTCAACCTCCGCGACTTT CGAGCTTCTGGCGCCATTAAGCGCTACGATCCCTGGGCGCGCGCTGAGGCCTGGCGGTCCGAGGGCCACTTCTCT CGATACAATCGCTTCAAAAACGCCTTGCCTGGTCTCGGCATTGGATCCGCAGCCTTTGCCGCATATTGCGTCTAC GAACACTTTTTCCTTCAAGACGAACACCATCATGGCCAAGATGACCACGCACAAGAGACGTCGCATTGA |
| Transcript | >OphauG2|3810 ATGCTTCCCACTCGCGTCCTGCGCGCCGCAAAGGGCTCCAAGGCCAACATCACCGGCTTCAACCTCCGCGACTTT CGAGCTTCTGGCGCCATTAAGCGCTACGATCCCTGGGCGCGCGCTGAGGCCTGGCGGTCCGAGGGCCACTTCTCT CGATACAATCGCTTCAAAAACGCCTTGCCTGGTCTCGGCATTGGATCCGCAGCCTTTGCCGCATATTGCGTCTAC GAACACTTTTTCCTTCAAGACGAACACCATCATGGCCAAGATGACCACGCACAAGAGACGTCGCATTGA |
| Gene | >OphauG2|3810 ATGCTTCCCACTCGGTGCGTCTACACCCCCTCTAAAGAACAAGTGCCACCTTGTTCGTCTTCGCTTACGCTTTCT TCTAGCGTCCTGCGCGCCGCAAAGGGCTCCAAGGCCAACATCACCGGCTTCAACCTCCGCGACTTTCGAGCTTCT GGCGCCATTAAGCGCTACGATCCCTGGGCGCGCGCGTTGGTCTCCACGTCTTTTTTTCTTCTTCCTTGTCTTGTT CTTGTTCTTCTTGTCGCCTCTCCATGCCTCGCTTTGCTGACTCTTGTATTTTGTATTCTTGACAGTGAGGCCTGG CGGTCCGAGGGCCACTTCTCTCGATACAATCGCTTCAAAAACGCCTTGCCTGGTCTCGGCATTGGATCCGCAGCC TTTGCCGCATATTGCGTCTACGAACACTTTTTCCTTCAAGACGAACACCATCATGGCCAAGATGACCACGCACAA GAGACGTCGCATTGA |