Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|3776
Gene name
LocationContig_296:19257..19836
Strand+
Gene length (bp)579
Transcript length (bp)360
Coding sequence length (bp)360
Protein length (aa) 120

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74383|YNV8_SCHPO Uncharacterized protein C3H7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.08c PE=4 SV=1 14 112 6.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 25 44 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|3776
MRRLESSSAHSQEQLKRDTKRNPELMILGAVMVAALGGAGFYFGRSPTMSTSENPVNIAKDGMPWEGDTEGKYKY
HPGGDPSREPRHAPSALNSVIVPNVTLPKQEHDKFNKWGKDGYP*
Coding >OphauG2|3776
ATGCGTCGTCTCGAATCCTCGTCGGCTCATAGCCAAGAGCAGCTCAAGCGCGACACCAAGCGCAATCCCGAGCTC
ATGATTCTCGGCGCTGTCATGGTTGCTGCTCTTGGCGGTGCTGGCTTTTATTTCGGCCGCTCTCCTACAATGTCC
ACTTCCGAAAACCCCGTCAACATTGCCAAGGACGGCATGCCCTGGGAGGGCGACACCGAGGGCAAATACAAGTAC
CACCCGGGCGGCGACCCCTCGAGGGAACCTCGTCACGCCCCCAGCGCCCTCAATTCCGTCATTGTGCCCAACGTT
ACCCTGCCCAAGCAAGAGCACGACAAGTTTAACAAGTGGGGCAAGGATGGTTATCCCTAG
Transcript >OphauG2|3776
ATGCGTCGTCTCGAATCCTCGTCGGCTCATAGCCAAGAGCAGCTCAAGCGCGACACCAAGCGCAATCCCGAGCTC
ATGATTCTCGGCGCTGTCATGGTTGCTGCTCTTGGCGGTGCTGGCTTTTATTTCGGCCGCTCTCCTACAATGTCC
ACTTCCGAAAACCCCGTCAACATTGCCAAGGACGGCATGCCCTGGGAGGGCGACACCGAGGGCAAATACAAGTAC
CACCCGGGCGGCGACCCCTCGAGGGAACCTCGTCACGCCCCCAGCGCCCTCAATTCCGTCATTGTGCCCAACGTT
ACCCTGCCCAAGCAAGAGCACGACAAGTTTAACAAGTGGGGCAAGGATGGTTATCCCTAG
Gene >OphauG2|3776
ATGCGTCGTCTCGAATCCTCGTCGGCTCATAGCCAAGAGCAGCTCAAGCGCGACACCAAGCGCAATCCCGAGCTC
ATGGTCCGTAGACAACTCTTTTTTTTCCCCTCCCGCACTCTCCGTCGTAGACGAATAAATTGAAAATTTTTTAAA
AAAATCGCTCGCATGGCTGATTACATGCTAGATTCTCGGCGCTGTCATGGTTGCTGCTCTTGGCGGTGCTGGCTT
TTATTTCGGTACGCTTTCTCCTTTCCCCACCTCGTAAACCTCTGCCAAACCTCTTGCCCACCATGGAATCCGGCA
AAATCGTCGCCAACATATACAACCCCCCCGGCTGACAGCTCCTCCTCAGGCCGCTCTCCTACAATGTCCACTTCC
GAAAACCCCGTCAACATTGCCAAGGACGGCATGCCCTGGGAGGGCGACACCGAGGGCAAATACAAGTACCACCCG
GGCGGCGACCCCTCGAGGGAACCTCGTCACGCCCCCAGCGCCCTCAATTCCGTCATTGTGCCCAACGTTACCCTG
CCCAAGCAAGAGCACGACAAGTTTAACAAGTGGGGCAAGGATGGTTATCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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