Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3752
Gene name
Location	Contig_293:12804..13461
Strand	+
Gene length (bp)	657
Transcript length (bp)	588
Coding sequence length (bp)	588
Protein length (aa)	196

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q06485\|ATG33_YEAST	Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG33 PE=1 SV=1	9	186	7.0E-07
sp\|C8ZDW3\|ATG33_YEAS8	Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=ATG33 PE=3 SV=1	9	186	3.0E-06
sp\|A7A1N4\|ATG33_YEAS7	Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG33 PE=3 SV=1	9	186	3.0E-06
sp\|C7GRY1\|ATG33_YEAS2	Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain JAY291) GN=ATG33 PE=3 SV=1	9	186	3.0E-06
sp\|B3RHM5\|ATG33_YEAS1	Autophagy-related protein 33 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=ATG33 PE=3 SV=1	9	186	3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 13	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	9	31	22
2	88	107	19
3	163	185	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3752 MTCAGARALSVLKFVGTVSLGLLTGVSYTVSAVSLPSLLSLPSSASASNAIVSLTTGLKTPLTVLTALASGPLFV SFLASPRSVRHPYLAYTSLLAGFSMAVPLVLPQPQPRKSAARKQARRSKMEASYEVLGEPQSESTSEGEADDMNG EGVRTQVEALSRAFFVRTCLAGLGFAMSVLGIWGDGVPQSLVYVS*
Coding	>OphauG2\|3752 ATGACGTGCGCGGGAGCCAGAGCCCTTTCTGTGCTCAAGTTTGTGGGCACGGTGTCCCTCGGTCTGCTGACGGGC GTCTCCTACACCGTTTCGGCTGTGTCGCTGCCCAGTCTTCTCTCCCTGCCGTCGTCGGCATCGGCCTCGAATGCC ATTGTATCGCTCACCACGGGCCTCAAGACACCTCTGACGGTGCTGACGGCTCTCGCATCCGGCCCGCTGTTTGTT TCCTTCCTTGCGTCTCCGCGTTCGGTTCGACACCCGTATCTGGCCTATACCTCGCTTCTTGCTGGATTCTCCATG GCTGTGCCCCTTGTCTTGCCGCAGCCGCAGCCGCGCAAGTCGGCTGCCAGGAAGCAGGCGCGCAGGTCCAAGATG GAAGCAAGCTACGAGGTGCTGGGCGAGCCTCAGAGCGAGTCGACAAGTGAGGGCGAGGCTGATGACATGAATGGG GAGGGGGTCCGGACTCAGGTCGAGGCTCTGTCACGGGCCTTTTTTGTACGGACATGTCTGGCTGGGCTGGGCTTT GCCATGTCTGTTTTGGGTATCTGGGGCGATGGTGTGCCTCAGAGTCTTGTCTATGTGTCGTGA
Transcript	>OphauG2\|3752 ATGACGTGCGCGGGAGCCAGAGCCCTTTCTGTGCTCAAGTTTGTGGGCACGGTGTCCCTCGGTCTGCTGACGGGC GTCTCCTACACCGTTTCGGCTGTGTCGCTGCCCAGTCTTCTCTCCCTGCCGTCGTCGGCATCGGCCTCGAATGCC ATTGTATCGCTCACCACGGGCCTCAAGACACCTCTGACGGTGCTGACGGCTCTCGCATCCGGCCCGCTGTTTGTT TCCTTCCTTGCGTCTCCGCGTTCGGTTCGACACCCGTATCTGGCCTATACCTCGCTTCTTGCTGGATTCTCCATG GCTGTGCCCCTTGTCTTGCCGCAGCCGCAGCCGCGCAAGTCGGCTGCCAGGAAGCAGGCGCGCAGGTCCAAGATG GAAGCAAGCTACGAGGTGCTGGGCGAGCCTCAGAGCGAGTCGACAAGTGAGGGCGAGGCTGATGACATGAATGGG GAGGGGGTCCGGACTCAGGTCGAGGCTCTGTCACGGGCCTTTTTTGTACGGACATGTCTGGCTGGGCTGGGCTTT GCCATGTCTGTTTTGGGTATCTGGGGCGATGGTGTGCCTCAGAGTCTTGTCTATGTGTCGTGA
Gene	>OphauG2\|3752 ATGACGTGCGCGGGAGCCAGAGCCCTTTCTGTGCTCAAGTTTGTGGGCACGGTGTCCCTCGGTCTGCTGACGGTA CGTCGCATCGGGCCGTCGCTTGTTGGGCGCTGCTCGTGTCATGCTAATTCATGCTGGCGGGTGCAGGGCGTCTCC TACACCGTTTCGGCTGTGTCGCTGCCCAGTCTTCTCTCCCTGCCGTCGTCGGCATCGGCCTCGAATGCCATTGTA TCGCTCACCACGGGCCTCAAGACACCTCTGACGGTGCTGACGGCTCTCGCATCCGGCCCGCTGTTTGTTTCCTTC CTTGCGTCTCCGCGTTCGGTTCGACACCCGTATCTGGCCTATACCTCGCTTCTTGCTGGATTCTCCATGGCTGTG CCCCTTGTCTTGCCGCAGCCGCAGCCGCGCAAGTCGGCTGCCAGGAAGCAGGCGCGCAGGTCCAAGATGGAAGCA AGCTACGAGGTGCTGGGCGAGCCTCAGAGCGAGTCGACAAGTGAGGGCGAGGCTGATGACATGAATGGGGAGGGG GTCCGGACTCAGGTCGAGGCTCTGTCACGGGCCTTTTTTGTACGGACATGTCTGGCTGGGCTGGGCTTTGCCATG TCTGTTTTGGGTATCTGGGGCGATGGTGTGCCTCAGAGTCTTGTCTATGTGTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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