© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3695 |
| Gene name | |
| Location | Contig_288:6828..7564 |
| Strand | + |
| Gene length (bp) | 736 |
| Transcript length (bp) | 573 |
| Coding sequence length (bp) | 573 |
| Protein length (aa) | 191 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06127 | Mpo1-like | 2-hydroxy-palmitic acid dioxygenase Mpo1-like | 1.4E-27 | 4 | 159 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13737|YDR2_SCHPO | Uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.02 PE=4 SV=2 | 5 | 176 | 3.0E-28 |
| sp|P25338|YGB0_YEAST | Uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL010W PE=1 SV=2 | 3 | 185 | 5.0E-25 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 55 | 77 | 22 |
| 3 | 81 | 100 | 19 |
| 4 | 107 | 129 | 22 |
| 5 | 139 | 161 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3695 MSLDLERHLTFYGAYHHNAVNVAIHMVCVPLILVSAFCLATYTGTLIEAPFWLTGPYLHLNLGTMAAVAYAALYV LLEPVAGFVLAVFCIASAALANFLRMEDSKTTLHYALAIHIVSWVAQFVGHGVFEGRAPALLDNLAQALFLAPMF VWLELLFKLGYRKELQSRVDKRVQVEIAKFRAASKGGKAG* |
| Coding | >OphauG2|3695 ATGTCGCTTGATCTGGAGCGCCATTTAACCTTTTACGGCGCCTATCATCACAACGCAGTCAACGTGGCCATTCAC ATGGTCTGCGTGCCCCTGATTCTCGTGTCGGCCTTTTGCTTGGCTACCTACACAGGCACCTTGATTGAGGCGCCT TTCTGGCTCACGGGGCCCTATCTTCATCTCAACCTGGGCACCATGGCAGCCGTTGCCTACGCCGCCCTCTACGTC TTGCTCGAGCCCGTGGCAGGCTTCGTCCTGGCCGTCTTTTGCATCGCCAGCGCCGCCCTGGCCAATTTCCTCCGC ATGGAGGATTCCAAGACGACTTTGCACTATGCCTTGGCAATCCACATAGTATCATGGGTCGCTCAGTTTGTCGGG CATGGGGTCTTTGAGGGACGTGCTCCTGCACTGCTTGACAATTTGGCTCAAGCTCTCTTCCTGGCCCCCATGTTT GTGTGGCTCGAACTTCTCTTCAAGCTAGGCTACCGCAAAGAGTTGCAGAGCCGCGTGGACAAGAGGGTTCAAGTC GAGATTGCCAAGTTTCGGGCTGCGTCCAAAGGCGGCAAGGCTGGATGA |
| Transcript | >OphauG2|3695 ATGTCGCTTGATCTGGAGCGCCATTTAACCTTTTACGGCGCCTATCATCACAACGCAGTCAACGTGGCCATTCAC ATGGTCTGCGTGCCCCTGATTCTCGTGTCGGCCTTTTGCTTGGCTACCTACACAGGCACCTTGATTGAGGCGCCT TTCTGGCTCACGGGGCCCTATCTTCATCTCAACCTGGGCACCATGGCAGCCGTTGCCTACGCCGCCCTCTACGTC TTGCTCGAGCCCGTGGCAGGCTTCGTCCTGGCCGTCTTTTGCATCGCCAGCGCCGCCCTGGCCAATTTCCTCCGC ATGGAGGATTCCAAGACGACTTTGCACTATGCCTTGGCAATCCACATAGTATCATGGGTCGCTCAGTTTGTCGGG CATGGGGTCTTTGAGGGACGTGCTCCTGCACTGCTTGACAATTTGGCTCAAGCTCTCTTCCTGGCCCCCATGTTT GTGTGGCTCGAACTTCTCTTCAAGCTAGGCTACCGCAAAGAGTTGCAGAGCCGCGTGGACAAGAGGGTTCAAGTC GAGATTGCCAAGTTTCGGGCTGCGTCCAAAGGCGGCAAGGCTGGATGA |
| Gene | >OphauG2|3695 ATGTCGCTTGATCTGGAGCGCCATTTAACCTTTGTGCGTGGTGCCGTGCCACTTGGCACCTGCCCAGCCTTGCTC CAGCTAACGCCTTGGCCCAGTACGGCGCCTATCATCACAACGCAGTCAACGTGGCCATTCACATGGTCTGCGTGC CCCTGATTCTCGTGTCGGCCTTTTGCTTGGTACGCTCTTGCTCCCAGTCTTGACCTCGTCTGCTTCCGCCTCATC CGGCCAGTCGTGGCCTTTGCAAGGTGGACAGCCTCTCACCCAGCGTCATGGACAGGCTACCTACACAGGCACCTT GATTGAGGCGCCTTTCTGGCTCACGGGGCCCTATCTTCATCTCAACCTGGGCACCATGGCAGCCGTTGCCTACGC CGCCCTCTACGTCTTGCTCGAGCCCGTGGCAGGCTTCGTCCTGGCCGTCTTTTGCATCGCCAGCGCCGCCCTGGC CAATTTCCTCCGCATGGAGGATTCCAAGACGACTTTGCACTATGCCTTGGCAATCCACATAGTATCATGGGTCGC TCAGTTTGTCGGGCATGGGGTCTTTGAGGGACGTGCTCCTGCACTGCTTGACAATTTGGCTCAAGCTCTCTTCCT GGCCCCCATGTTTGTGTGGCTCGAACTTCTCTTCAAGCTAGGCTACCGCAAAGAGTTGCAGAGCCGCGTGGACAA GAGGGTTCAAGTCGAGATTGCCAAGTTTCGGGCTGCGTCCAAAGGCGGCAAGGCTGGATGA |