© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3644 |
| Gene name | |
| Location | Contig_281:7976..8296 |
| Strand | + |
| Gene length (bp) | 320 |
| Transcript length (bp) | 261 |
| Coding sequence length (bp) | 261 |
| Protein length (aa) | 87 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF15786 | PET117 | PET assembly of cytochrome c oxidase, mitochondrial | 1.6E-24 | 4 | 69 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C6Y4C1|PT117_SCHPO | Protein pet117, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pet117 PE=2 SV=1 | 1 | 65 | 2.0E-08 |
| sp|P0DJF2|PT117_MOUSE | Protein PET117 homolog, mitochondrial OS=Mus musculus GN=Pet117 PE=3 SV=1 | 1 | 50 | 2.0E-07 |
| sp|Q02771|PT117_YEAST | Protein PET117, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET117 PE=3 SV=1 | 1 | 54 | 2.0E-07 |
| sp|Q6UWS5|PT117_HUMAN | Protein PET117 homolog, mitochondrial OS=Homo sapiens GN=PET117 PE=3 SV=1 | 1 | 50 | 7.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3644 MSRASKLTLGFTSLFAASTIIFVHYQQRLEKSAMHQGVERDLERQRIKQERQLDFDAQRALESDYRQYQTVHQSA HDDLEPPPAPR* |
| Coding | >OphauG2|3644 ATGTCCCGCGCCTCCAAGCTCACCCTCGGCTTCACCTCCCTCTTCGCCGCCTCGACAATCATCTTTGTCCACTAC CAACAACGCCTCGAAAAATCTGCCATGCACCAAGGCGTCGAACGCGACTTGGAGAGGCAGCGCATCAAGCAGGAG CGCCAGCTCGACTTTGACGCTCAACGAGCCCTCGAATCAGACTATCGCCAATACCAAACCGTTCACCAGTCTGCC CACGACGACCTCGAGCCCCCTCCCGCGCCGAGATAG |
| Transcript | >OphauG2|3644 ATGTCCCGCGCCTCCAAGCTCACCCTCGGCTTCACCTCCCTCTTCGCCGCCTCGACAATCATCTTTGTCCACTAC CAACAACGCCTCGAAAAATCTGCCATGCACCAAGGCGTCGAACGCGACTTGGAGAGGCAGCGCATCAAGCAGGAG CGCCAGCTCGACTTTGACGCTCAACGAGCCCTCGAATCAGACTATCGCCAATACCAAACCGTTCACCAGTCTGCC CACGACGACCTCGAGCCCCCTCCCGCGCCGAGATAG |
| Gene | >OphauG2|3644 ATGTCCCGCGCCTCCAAGCTCACCCTCGGCTTCACCTCCCTCTTCGCCGCCTCGACAATCATCTTTGTCCACTAC CAACAACGCCTCGAAAAATCTGTACGCCTTCCCCCTTAAAAACCCCCCTCCCACCGACCTGACTTGCCTCCTTCT ACAAGGCCATGCACCAAGGCGTCGAACGCGACTTGGAGAGGCAGCGCATCAAGCAGGAGCGCCAGCTCGACTTTG ACGCTCAACGAGCCCTCGAATCAGACTATCGCCAATACCAAACCGTTCACCAGTCTGCCCACGACGACCTCGAGC CCCCTCCCGCGCCGAGATAG |