© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3636 |
| Gene name | |
| Location | Contig_280:7222..7793 |
| Strand | + |
| Gene length (bp) | 571 |
| Transcript length (bp) | 507 |
| Coding sequence length (bp) | 507 |
| Protein length (aa) | 169 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01679 | Pmp3 | Proteolipid membrane potential modulator | 4.7E-18 | 5 | 53 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C1W4|PMP3_SCHPO | Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2 | 4 | 56 | 1.0E-12 |
| sp|O74837|PMP31_SCHPO | Plasma membrane proteolipid 31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp31 PE=1 SV=2 | 4 | 57 | 1.0E-10 |
| sp|Q871V2|PMP3_NEUCR | Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1 | 3 | 56 | 4.0E-10 |
| sp|Q4HXT6|PMP3_GIBZE | Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2 | 3 | 56 | 1.0E-09 |
| sp|P34655|YOT0_CAEEL | UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans GN=ZK632.10 PE=3 SV=2 | 6 | 53 | 2.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C1W4|PMP3_SCHPO | Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2 | 4 | 56 | 1.0E-12 |
| sp|O74837|PMP31_SCHPO | Plasma membrane proteolipid 31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp31 PE=1 SV=2 | 4 | 57 | 1.0E-10 |
| sp|Q871V2|PMP3_NEUCR | Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1 | 3 | 56 | 4.0E-10 |
| sp|Q4HXT6|PMP3_GIBZE | Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2 | 3 | 56 | 1.0E-09 |
| sp|P34655|YOT0_CAEEL | UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans GN=ZK632.10 PE=3 SV=2 | 6 | 53 | 2.0E-09 |
| sp|Q4WYA5|PMP3_ASPFU | Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1 | 3 | 56 | 9.0E-09 |
| sp|Q9LRI7|OSR8_ORYSJ | Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1 | 10 | 67 | 1.0E-07 |
| sp|Q9M095|RC23_ARATH | UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=1 | 10 | 54 | 3.0E-07 |
| sp|Q22702|YCU5_CAEEL | UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1 | 12 | 56 | 3.0E-06 |
| sp|P0CS18|PMP3_CRYNJ | Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PMP3 PE=3 SV=1 | 4 | 56 | 6.0E-06 |
| sp|P0CS19|PMP3_CRYNB | Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PMP3 PE=3 SV=1 | 4 | 56 | 6.0E-06 |
| sp|Q9SUI0|RC24_ARATH | UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana GN=At4g30660 PE=2 SV=1 | 10 | 54 | 6.0E-06 |
| sp|Q6BVN0|PMP3_DEBHA | Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PMP3 PE=3 SV=1 | 15 | 56 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 22 | 17 |
| 2 | 32 | 54 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3636 MCSADIFLGVIAILFPPLPVWVKRGICSADSIINILLCVLGILPGLIHSWYIIAKYPDDPYEYETLGPEAGGRLV WVQVAAPPGSGCRHCSHPCNGTSHHQQRSSQQKKHKHSRQQPQPRQQQPESHPAMNYGTQGASSASAGASNSQAV PPSYAEVVAGDHKIQTAD* |
| Coding | >OphauG2|3636 ATGTGCTCCGCCGACATCTTCCTCGGCGTAATTGCCATTCTCTTTCCTCCTCTCCCAGTCTGGGTCAAGCGCGGC ATCTGTAGCGCCGACTCCATCATCAACATCCTCCTCTGCGTGCTCGGCATTCTCCCCGGCCTCATCCACTCGTGG TACATCATCGCAAAGTACCCCGACGACCCGTACGAGTACGAGACGCTGGGCCCCGAGGCTGGCGGACGTCTGGTC TGGGTTCAGGTTGCTGCGCCGCCTGGAAGTGGCTGCCGCCATTGCTCCCATCCTTGCAACGGGACATCCCATCAT CAGCAGCGTTCCTCGCAGCAAAAGAAGCACAAGCACTCTCGCCAGCAGCCCCAACCTCGGCAACAACAGCCAGAA TCGCACCCTGCCATGAACTACGGCACTCAGGGAGCCAGCTCTGCCTCGGCAGGCGCTTCAAATAGTCAGGCTGTT CCACCATCATATGCAGAGGTTGTGGCTGGCGATCACAAGATTCAGACGGCCGACTAG |
| Transcript | >OphauG2|3636 ATGTGCTCCGCCGACATCTTCCTCGGCGTAATTGCCATTCTCTTTCCTCCTCTCCCAGTCTGGGTCAAGCGCGGC ATCTGTAGCGCCGACTCCATCATCAACATCCTCCTCTGCGTGCTCGGCATTCTCCCCGGCCTCATCCACTCGTGG TACATCATCGCAAAGTACCCCGACGACCCGTACGAGTACGAGACGCTGGGCCCCGAGGCTGGCGGACGTCTGGTC TGGGTTCAGGTTGCTGCGCCGCCTGGAAGTGGCTGCCGCCATTGCTCCCATCCTTGCAACGGGACATCCCATCAT CAGCAGCGTTCCTCGCAGCAAAAGAAGCACAAGCACTCTCGCCAGCAGCCCCAACCTCGGCAACAACAGCCAGAA TCGCACCCTGCCATGAACTACGGCACTCAGGGAGCCAGCTCTGCCTCGGCAGGCGCTTCAAATAGTCAGGCTGTT CCACCATCATATGCAGAGGTTGTGGCTGGCGATCACAAGATTCAGACGGCCGACTAG |
| Gene | >OphauG2|3636 ATGTGCTCCGCCGACATCTTCCTCGGCGTAATTGCCATTCTCTTTCCTCCTCTCCCAGGTACGTGAAGCCCTTTT TTTTTTGCCCACTCATTGCCCCATCAGTAAACTCACCCGTGCCGCAGTCTGGGTCAAGCGCGGCATCTGTAGCGC CGACTCCATCATCAACATCCTCCTCTGCGTGCTCGGCATTCTCCCCGGCCTCATCCACTCGTGGTACATCATCGC AAAGTACCCCGACGACCCGTACGAGTACGAGACGCTGGGCCCCGAGGCTGGCGGACGTCTGGTCTGGGTTCAGGT TGCTGCGCCGCCTGGAAGTGGCTGCCGCCATTGCTCCCATCCTTGCAACGGGACATCCCATCATCAGCAGCGTTC CTCGCAGCAAAAGAAGCACAAGCACTCTCGCCAGCAGCCCCAACCTCGGCAACAACAGCCAGAATCGCACCCTGC CATGAACTACGGCACTCAGGGAGCCAGCTCTGCCTCGGCAGGCGCTTCAAATAGTCAGGCTGTTCCACCATCATA TGCAGAGGTTGTGGCTGGCGATCACAAGATTCAGACGGCCGACTAG |