Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3609
Gene name
Location	Contig_279:13222..15619
Strand	-
Gene length (bp)	2397
Transcript length (bp)	2106
Coding sequence length (bp)	2106
Protein length (aa)	702

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04818	CID	CID domain	3.0E-11	15	114

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10237\|YD14_SCHPO	Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.04c PE=3 SV=1	6	660	3.0E-81
sp\|P39081\|PCF11_YEAST	Protein PCF11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCF11 PE=1 SV=2	1	170	2.0E-24
sp\|O94913\|PCF11_HUMAN	Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3	7	117	3.0E-18
sp\|O94913\|PCF11_HUMAN	Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3	500	701	2.0E-17
sp\|Q0WPF2\|PCFS4_ARATH	Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana GN=PCFS4 PE=1 SV=1	6	117	5.0E-16

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10237\|YD14_SCHPO	Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.04c PE=3 SV=1	6	660	3.0E-81
sp\|P39081\|PCF11_YEAST	Protein PCF11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCF11 PE=1 SV=2	1	170	2.0E-24
sp\|O94913\|PCF11_HUMAN	Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3	7	117	3.0E-18
sp\|O94913\|PCF11_HUMAN	Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens GN=PCF11 PE=1 SV=3	500	701	2.0E-17
sp\|Q0WPF2\|PCFS4_ARATH	Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana GN=PCFS4 PE=1 SV=1	6	117	5.0E-16
sp\|P39081\|PCF11_YEAST	Protein PCF11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCF11 PE=1 SV=2	511	664	4.0E-14
sp\|Q0WPF2\|PCFS4_ARATH	Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana GN=PCFS4 PE=1 SV=1	405	648	5.0E-12
sp\|Q09345\|PCF11_CAEEL	Polyadenylation and cleavage factor homolog 11 OS=Caenorhabditis elegans GN=pcf-11 PE=3 SV=1	6	112	5.0E-12
sp\|Q09345\|PCF11_CAEEL	Polyadenylation and cleavage factor homolog 11 OS=Caenorhabditis elegans GN=pcf-11 PE=3 SV=1	516	668	4.0E-09
sp\|Q9FIX8\|PCFS5_ARATH	Polyadenylation and cleavage factor homolog 5 OS=Arabidopsis thaliana GN=PCFS5 PE=1 SV=1	515	660	6.0E-08
sp\|Q9C710\|PCFS1_ARATH	Polyadenylation and cleavage factor homolog 1 OS=Arabidopsis thaliana GN=PCFS1 PE=1 SV=1	515	660	2.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3609 MASDADEVAEDYRHALEDLSSNMRFEISNLTVIARENTEHALAIADVLQQHILKAPPNKKLPALYVLDSIVKNVG TPYTLYFGRNLFKTFMEAYAVVDHNIRRKMEEMLKTWKDPVPGSMDTRPVFSHELVRPIEHALMKARAATLPQQG PIPGRPRSALMPNRNTPTPPGIRPSQAPSGAYSSAQYPPYTNGGHGGEQVTSGLNPYLGQQQHLPRHSTPQQMMA TTAVPFQQTFAGPYGAAMAATAPTGISVDTLSSDIQNLIVAMKAEFSQKPHDASVQNRLKALLDLQGVVQYTSLP PDQLELIKNKVTELAAVNMRPSSGQGSFQGSTAIVPLQPQHQQGHGAPSLVSSLVARGPTAATAVPASASSSQTS LTIDSLLGPGAMAALMARQSNVSQKPISTPSHALTATKSPQPAPTELSGSQPQGGAVALLDRLRQAGMLPPAAAN AVTKPTVVAAPPGVATAGPLSALPSNIASLITSCQTQIRQSKVDTAMTAMPINTNVLKQGLQPRAVIALYDGLGP PCTQCGRRFKTDGEGKKKKMAHMDWHFRVHQRSSEAEKKGTHRSWYVDEKDWLKSREVVDSDHIAAPEEESALES DAEHKVQYIAVPDAGKNINNVCPICQEKFENKWLDTAQEWVWLDVVLVGNRAYHASCHTEATRDRDGTPIASRLT PEPILGKRKAEASLASPKIRAMKTAT*
Coding	>OphauG2\|3609 ATGGCGTCAGACGCCGACGAGGTGGCTGAGGATTATCGCCATGCTCTCGAGGATCTATCGTCCAATATGCGCTTT GAAATTAGCAACCTCACTGTAATTGCACGAGAAAATACCGAACACGCTTTAGCTATTGCCGACGTTTTGCAGCAG CACATTCTCAAGGCACCTCCTAATAAAAAGCTTCCCGCGCTTTACGTTTTAGACTCAATTGTCAAGAATGTTGGC ACTCCATACACACTATATTTTGGCCGCAATCTCTTCAAAACCTTTATGGAGGCCTATGCCGTTGTTGATCATAAC ATTCGTCGAAAGATGGAAGAGATGCTCAAGACGTGGAAGGACCCGGTGCCTGGATCTATGGATACTCGGCCTGTC TTTTCACACGAACTTGTACGCCCAATAGAACATGCACTTATGAAGGCTAGGGCGGCAACGCTGCCACAGCAGGGT CCCATTCCAGGCCGGCCACGTTCTGCGCTCATGCCAAACCGTAACACGCCGACTCCCCCCGGCATCCGACCTTCA CAAGCACCATCGGGCGCGTATTCCAGTGCCCAATACCCCCCATACACCAACGGGGGACATGGCGGGGAGCAGGTT ACAAGTGGTCTCAACCCCTACCTCGGTCAGCAGCAACACCTTCCTCGCCACTCAACTCCGCAACAAATGATGGCT ACCACGGCAGTGCCATTTCAGCAGACCTTTGCAGGACCATATGGAGCAGCGATGGCAGCAACTGCCCCGACTGGT ATAAGCGTAGACACTTTGAGCAGTGACATTCAGAACCTGATTGTTGCCATGAAGGCCGAGTTCTCGCAGAAGCCG CATGATGCTAGTGTGCAGAACAGACTTAAGGCACTGCTGGACCTGCAGGGGGTTGTGCAGTACACGAGCCTGCCT CCGGACCAGCTCGAGCTCATAAAGAACAAAGTAACTGAACTTGCTGCCGTGAACATGAGGCCCTCATCGGGCCAA GGCTCTTTTCAGGGCTCAACGGCAATTGTACCACTGCAACCACAACATCAACAAGGACACGGGGCGCCGTCGTTG GTCTCGTCACTTGTAGCTCGCGGTCCGACGGCGGCGACGGCAGTGCCTGCGTCTGCGTCTTCTAGCCAGACGTCG CTGACCATAGACTCGCTGCTGGGCCCGGGGGCAATGGCAGCCTTGATGGCGAGGCAATCAAACGTTTCGCAAAAG CCTATTTCCACTCCCTCACATGCCTTGACTGCTACAAAATCACCACAGCCTGCTCCAACAGAGCTGTCTGGGTCT CAACCCCAAGGAGGAGCCGTGGCTCTCTTGGACCGTCTACGGCAAGCTGGGATGCTTCCTCCAGCTGCGGCAAAT GCCGTGACAAAACCTACTGTGGTGGCTGCTCCTCCCGGTGTAGCAACTGCTGGGCCTTTATCAGCACTGCCATCA AATATTGCTAGTTTGATAACATCGTGCCAGACTCAAATAAGACAATCTAAAGTCGATACTGCGATGACAGCCATG CCCATCAATACAAATGTGCTGAAGCAAGGATTGCAGCCACGTGCCGTGATTGCGCTTTATGACGGCCTGGGTCCT CCATGTACGCAGTGCGGCAGGCGGTTTAAGACGGATGGCGAGGGCAAAAAGAAGAAGATGGCACACATGGATTGG CATTTCCGGGTGCATCAACGGAGTAGCGAAGCGGAAAAGAAGGGAACGCACCGCAGTTGGTACGTTGATGAAAAG GACTGGCTCAAGTCTCGTGAGGTTGTCGACTCGGACCACATAGCAGCTCCGGAGGAGGAGTCGGCACTTGAATCA GACGCTGAGCATAAAGTACAATATATTGCAGTTCCGGATGCAGGCAAAAACATCAACAATGTGTGTCCCATCTGT CAGGAGAAGTTTGAGAACAAGTGGCTAGACACTGCGCAAGAATGGGTCTGGCTAGATGTGGTCCTTGTTGGAAAC AGAGCATATCACGCGTCATGCCACACGGAAGCGACTCGGGATCGCGATGGAACGCCTATAGCATCGCGATTGACG CCGGAGCCTATACTGGGCAAGAGAAAAGCCGAGGCGAGCCTAGCCTCGCCCAAAATCCGTGCCATGAAGACGGCG ACGTGA
Transcript	>OphauG2\|3609 ATGGCGTCAGACGCCGACGAGGTGGCTGAGGATTATCGCCATGCTCTCGAGGATCTATCGTCCAATATGCGCTTT GAAATTAGCAACCTCACTGTAATTGCACGAGAAAATACCGAACACGCTTTAGCTATTGCCGACGTTTTGCAGCAG CACATTCTCAAGGCACCTCCTAATAAAAAGCTTCCCGCGCTTTACGTTTTAGACTCAATTGTCAAGAATGTTGGC ACTCCATACACACTATATTTTGGCCGCAATCTCTTCAAAACCTTTATGGAGGCCTATGCCGTTGTTGATCATAAC ATTCGTCGAAAGATGGAAGAGATGCTCAAGACGTGGAAGGACCCGGTGCCTGGATCTATGGATACTCGGCCTGTC TTTTCACACGAACTTGTACGCCCAATAGAACATGCACTTATGAAGGCTAGGGCGGCAACGCTGCCACAGCAGGGT CCCATTCCAGGCCGGCCACGTTCTGCGCTCATGCCAAACCGTAACACGCCGACTCCCCCCGGCATCCGACCTTCA CAAGCACCATCGGGCGCGTATTCCAGTGCCCAATACCCCCCATACACCAACGGGGGACATGGCGGGGAGCAGGTT ACAAGTGGTCTCAACCCCTACCTCGGTCAGCAGCAACACCTTCCTCGCCACTCAACTCCGCAACAAATGATGGCT ACCACGGCAGTGCCATTTCAGCAGACCTTTGCAGGACCATATGGAGCAGCGATGGCAGCAACTGCCCCGACTGGT ATAAGCGTAGACACTTTGAGCAGTGACATTCAGAACCTGATTGTTGCCATGAAGGCCGAGTTCTCGCAGAAGCCG CATGATGCTAGTGTGCAGAACAGACTTAAGGCACTGCTGGACCTGCAGGGGGTTGTGCAGTACACGAGCCTGCCT CCGGACCAGCTCGAGCTCATAAAGAACAAAGTAACTGAACTTGCTGCCGTGAACATGAGGCCCTCATCGGGCCAA GGCTCTTTTCAGGGCTCAACGGCAATTGTACCACTGCAACCACAACATCAACAAGGACACGGGGCGCCGTCGTTG GTCTCGTCACTTGTAGCTCGCGGTCCGACGGCGGCGACGGCAGTGCCTGCGTCTGCGTCTTCTAGCCAGACGTCG CTGACCATAGACTCGCTGCTGGGCCCGGGGGCAATGGCAGCCTTGATGGCGAGGCAATCAAACGTTTCGCAAAAG CCTATTTCCACTCCCTCACATGCCTTGACTGCTACAAAATCACCACAGCCTGCTCCAACAGAGCTGTCTGGGTCT CAACCCCAAGGAGGAGCCGTGGCTCTCTTGGACCGTCTACGGCAAGCTGGGATGCTTCCTCCAGCTGCGGCAAAT GCCGTGACAAAACCTACTGTGGTGGCTGCTCCTCCCGGTGTAGCAACTGCTGGGCCTTTATCAGCACTGCCATCA AATATTGCTAGTTTGATAACATCGTGCCAGACTCAAATAAGACAATCTAAAGTCGATACTGCGATGACAGCCATG CCCATCAATACAAATGTGCTGAAGCAAGGATTGCAGCCACGTGCCGTGATTGCGCTTTATGACGGCCTGGGTCCT CCATGTACGCAGTGCGGCAGGCGGTTTAAGACGGATGGCGAGGGCAAAAAGAAGAAGATGGCACACATGGATTGG CATTTCCGGGTGCATCAACGGAGTAGCGAAGCGGAAAAGAAGGGAACGCACCGCAGTTGGTACGTTGATGAAAAG GACTGGCTCAAGTCTCGTGAGGTTGTCGACTCGGACCACATAGCAGCTCCGGAGGAGGAGTCGGCACTTGAATCA GACGCTGAGCATAAAGTACAATATATTGCAGTTCCGGATGCAGGCAAAAACATCAACAATGTGTGTCCCATCTGT CAGGAGAAGTTTGAGAACAAGTGGCTAGACACTGCGCAAGAATGGGTCTGGCTAGATGTGGTCCTTGTTGGAAAC AGAGCATATCACGCGTCATGCCACACGGAAGCGACTCGGGATCGCGATGGAACGCCTATAGCATCGCGATTGACG CCGGAGCCTATACTGGGCAAGAGAAAAGCCGAGGCGAGCCTAGCCTCGCCCAAAATCCGTGCCATGAAGACGGCG ACGTGA
Gene	>OphauG2\|3609 ATGGCGTCAGACGCCGACGAGGTGGCTGAGGATTATCGCCATGCTCTCGAGGATCTATCGTCCAATATGCGCTTT GAAATTAGCAACCTCACTGTAATTGCACGAGAAAATACCGAACACGCTTTAGCTATTGCCGACGTTTTGCAGCAG CACATTCTCAAGGTACGACTGCCGGGCTTACACTTGTGCCTTGTTTGGATGCAATTGAACGGACCTTGCTGGCGC ATGGTACACAATGGCTAATATGACCTTTAGGCACCTCCTAATAAAAAGCTTCCCGCGCTTTACGTTTTAGACTCA ATTGTCAAGAATGTTGGCACTCCATACACACTATATTTTGGCCGCAATCTCTTCAAAACCTTTATGGAGGCCTAT GCCGTTGTTGATCATAACATTCGTCGAAAGATGGAAGAGATGCTCAAGACGTGGAAGGACCCGGTGCCTGGATCT ATGGATACTCGGCCTGTCTTTTCACACGAACTTGTACGCCCAATAGAACATGCACTTATGAAGGCTAGGGCGGCA ACGCTGCCACAGCAGGGTCCCATTCCAGGCCGGCCACGTTCTGCGCTCATGCCAAACCGTAACACGCCGACTCCC CCCGGCATCCGACCTTCACAAGCACCATCGGGCGCGTATTCCAGTGCCCAATACCCCCCATACACCAACGGGGGA CATGGCGGGGAGCAGGTTACAAGTGGTCTCAACCCCTACCTCGGTCAGCAGCAACACGTGAGTCATGGTTTCCAA TACTAAATCTTGCCGCGCATGTCTTGGAGCATACACTGATTACTATGGCCATAGCTTCCTCGCCACTCAACTCCG CAACAAATGATGGCTACCACGGCAGTGCCATTTCAGCAGACCTTTGCAGGACCATATGGAGCAGCGATGGCAGCA ACTGCCCCGACTGGTATAAGCGTAGACACTTTGAGCAGTGACATTCAGAACCTGATTGTTGCCATGAAGGCCGAG TTCTCGCAGAAGCCGCATGATGCTAGTGTGCAGAACAGACTTAAGGCACTGCTGGACCTGCAGGGGGTTGTGCAG TACACGAGCCTGCCTCCGGACCAGCTCGAGCTCATAAAGAACAAAGTAACTGAACTTGCTGCCGTGAACATGAGG CCCTCATCGGGCCAAGGCTCTTTTCAGGGCTCAACGGCAATTGTACCACTGCAACCACAACATCAACAAGGACAC GGGGCGCCGTCGTTGGTCTCGTCACTTGTAGCTCGCGGTCCGACGGCGGCGACGGCAGTGCCTGCGTCTGCGTCT TCTAGCCAGACGTCGCTGACCATAGACTCGCTGCTGGGCCCGGGGGCAATGGCAGCCTTGATGGCGAGGCAATCA AACGTTTCGCAAAAGCCTATTTCCACTCCCTCACATGCCTTGACTGCTACAAAATCACCACAGCCTGCTCCAACA GAGCTGTCTGGGTCTCAACCCCAAGGAGGAGCCGTGGCTCTCTTGGACCGTCTACGGCAAGCTGGGATGCTTCCT CCAGCTGCGGCAAATGCCGTGACAAAACCTACTGTGGTGGCTGCTCCTCCCGGTGTAGCAACTGCTGGGCCTTTA TCAGCACTGCCATCAAATATTGCTAGTTTGATAACATCGTGCCAGACTCAAATAAGACAATCTAAAGTCGATACT GCGATGACAGCCATGCCCATCAATACAAATGTGCTGAAGCAAGGGTGAGCTCTAATGATTGTCATGAGTGATTAA TATTGAATCTTGAGCTGATGAAGTGCTGCACAGATTGCAGCCACGTGCCGTGATTGCGCTTTATGACGGCCTGGG TCCTCCATGTACGCAGTGCGGCAGGCGGTTTAAGACGGATGGCGAGGGCAAAAAGAAGAAGATGGCACACATGGA TTGGCATTTCCGGGTGCATCAACGGAGTAGCGAAGCGGAAAAGAAGGGAACGCACCGCAGTTGGTACGTTGATGA AAAGGTATGTAGAACAAGCTTGATTGATTGATTGATGTGGCAATTGCTAAATAGTCATGGGCATAGGACTGGCTC AAGTCTCGTGAGGTTGTCGACTCGGACCACATAGCAGCTCCGGAGGAGGAGTCGGCACTTGAATCAGACGCTGAG CATAAAGTACAATATATTGCAGTTCCGGATGCAGGCAAAAACATCAACAATGTGTGTCCCATCTGTCAGGAGAAG TTTGAGAACAAGTGGCTAGACACTGCGCAAGAATGGGTCTGGCTAGATGTGGTCCTTGTTGGAAACAGAGCATAT CACGCGTCATGCCACACGGAAGCGACTCGGGATCGCGATGGAACGCCTATAGCATCGCGATTGACGCCGGAGCCT ATACTGGGCAAGAGAAAAGCCGAGGCGAGCCTAGCCTCGCCCAAAATCCGTGCCATGAAGACGGCGACGTGA

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