© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3544 |
| Gene name | |
| Location | Contig_271:13580..14995 |
| Strand | - |
| Gene length (bp) | 1415 |
| Transcript length (bp) | 1176 |
| Coding sequence length (bp) | 1176 |
| Protein length (aa) | 392 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00002 | 7tm_2 | 7 transmembrane receptor (Secretin family) | 6.1E-08 | 23 | 213 |
| PF11710 | Git3 | G protein-coupled glucose receptor regulating Gpa2 | 1.1E-05 | 31 | 208 |
| PF05462 | Dicty_CAR | Slime mold cyclic AMP receptor | 6.3E-05 | 33 | 200 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54U75|CRLA_DICDI | Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 | 14 | 211 | 2.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004930 | G protein-coupled receptor activity | Yes |
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0003674 | molecular_function | No |
| GO:0050789 | regulation of biological process | No |
| GO:0038023 | signaling receptor activity | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0007165 | signal transduction | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0065007 | biological regulation | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 58 | 77 | 19 |
| 3 | 103 | 125 | 22 |
| 4 | 132 | 154 | 22 |
| 5 | 183 | 205 | 22 |
| 6 | 349 | 366 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3544 MISDGSSMLEVGSSLTPSQISALITIERTGAALSMLAILLTLVSFGLFSKLRTMPNHFLALASLANAGASVASMM GYDGVDKGQDSSLCQAQAFIFEWFMQSDPWWSCAMAVNVLLVFFFNVNPVKIHKRLWIYCLVCFGGPLIPAVILI CLQGDSRGAVYGDATLWCWIGPQWSLVRLYAYYIPIWLCLFTSLVIYVLVGCHVFRSRNQLRQVAGQMGSVPNSR SRVVLGSRDSAEERLTGNPDGCGTIMTELQVTSGPSPRKCPTPIPLSDEHGSSSRLPWVDCHVAMSKGIDGFQHF EVVCQSSTQGARRKSLLDRLHLGAVYKSITQAWISASLKLKCFDAVKRAYLRTSVIFGLAVIITWVPSSFNRLYS LQNDGRISFGYSVASG* |
| Coding | >OphauG2|3544 ATGATTAGCGATGGCAGCAGCATGCTCGAAGTCGGGTCGAGCCTGACGCCCAGCCAAATCTCGGCCCTCATCACG ATTGAGCGCACCGGCGCTGCCCTCTCCATGCTGGCCATCCTCTTGACCCTCGTGTCCTTTGGCCTCTTTTCCAAG CTGCGAACCATGCCCAACCATTTCCTCGCCTTGGCCTCTCTGGCCAATGCTGGCGCCAGCGTCGCCTCAATGATG GGATACGATGGCGTTGACAAGGGCCAAGACTCGTCTCTCTGTCAGGCCCAGGCCTTCATCTTTGAGTGGTTTATG CAGTCGGACCCGTGGTGGTCGTGTGCCATGGCCGTCAACGTGCTCTTGGTCTTCTTCTTCAACGTCAATCCCGTC AAGATCCATAAGCGTCTCTGGATCTATTGTCTCGTGTGTTTTGGCGGTCCCTTGATTCCCGCCGTTATTCTCATT TGTCTTCAAGGAGATTCTCGAGGAGCCGTTTACGGCGATGCCACGCTTTGGTGCTGGATTGGACCCCAATGGAGT CTTGTTCGTCTTTATGCCTACTACATCCCCATTTGGCTGTGTCTCTTTACCTCGCTTGTCATCTATGTCTTGGTT GGCTGCCACGTCTTTCGCAGTCGCAACCAGCTTCGCCAGGTGGCTGGTCAAATGGGCAGTGTGCCCAATAGTCGG TCCAGGGTTGTTTTGGGCAGTAGAGACTCAGCCGAAGAGCGTCTTACTGGCAATCCCGACGGCTGCGGCACAATT ATGACGGAGCTACAGGTAACGTCTGGTCCATCTCCTCGTAAATGCCCTACTCCAATTCCGCTCTCGGATGAACAC GGCTCAAGCTCTCGTTTGCCGTGGGTCGATTGCCACGTGGCAATGAGCAAAGGTATTGACGGCTTCCAGCATTTT GAGGTGGTGTGTCAGTCTAGCACCCAGGGCGCACGTCGCAAATCTTTGTTAGACAGGCTTCACTTGGGGGCCGTT TATAAAAGCATCACCCAGGCTTGGATCTCGGCTAGTCTGAAGCTCAAGTGCTTTGACGCGGTCAAGAGAGCCTAC TTGCGCACCAGCGTCATTTTTGGACTTGCCGTCATTATTACATGGGTGCCAAGTTCTTTCAACAGGCTTTACAGT CTGCAAAACGACGGTCGCATCAGCTTTGGCTACAGCGTCGCCAGCGGCTAG |
| Transcript | >OphauG2|3544 ATGATTAGCGATGGCAGCAGCATGCTCGAAGTCGGGTCGAGCCTGACGCCCAGCCAAATCTCGGCCCTCATCACG ATTGAGCGCACCGGCGCTGCCCTCTCCATGCTGGCCATCCTCTTGACCCTCGTGTCCTTTGGCCTCTTTTCCAAG CTGCGAACCATGCCCAACCATTTCCTCGCCTTGGCCTCTCTGGCCAATGCTGGCGCCAGCGTCGCCTCAATGATG GGATACGATGGCGTTGACAAGGGCCAAGACTCGTCTCTCTGTCAGGCCCAGGCCTTCATCTTTGAGTGGTTTATG CAGTCGGACCCGTGGTGGTCGTGTGCCATGGCCGTCAACGTGCTCTTGGTCTTCTTCTTCAACGTCAATCCCGTC AAGATCCATAAGCGTCTCTGGATCTATTGTCTCGTGTGTTTTGGCGGTCCCTTGATTCCCGCCGTTATTCTCATT TGTCTTCAAGGAGATTCTCGAGGAGCCGTTTACGGCGATGCCACGCTTTGGTGCTGGATTGGACCCCAATGGAGT CTTGTTCGTCTTTATGCCTACTACATCCCCATTTGGCTGTGTCTCTTTACCTCGCTTGTCATCTATGTCTTGGTT GGCTGCCACGTCTTTCGCAGTCGCAACCAGCTTCGCCAGGTGGCTGGTCAAATGGGCAGTGTGCCCAATAGTCGG TCCAGGGTTGTTTTGGGCAGTAGAGACTCAGCCGAAGAGCGTCTTACTGGCAATCCCGACGGCTGCGGCACAATT ATGACGGAGCTACAGGTAACGTCTGGTCCATCTCCTCGTAAATGCCCTACTCCAATTCCGCTCTCGGATGAACAC GGCTCAAGCTCTCGTTTGCCGTGGGTCGATTGCCACGTGGCAATGAGCAAAGGTATTGACGGCTTCCAGCATTTT GAGGTGGTGTGTCAGTCTAGCACCCAGGGCGCACGTCGCAAATCTTTGTTAGACAGGCTTCACTTGGGGGCCGTT TATAAAAGCATCACCCAGGCTTGGATCTCGGCTAGTCTGAAGCTCAAGTGCTTTGACGCGGTCAAGAGAGCCTAC TTGCGCACCAGCGTCATTTTTGGACTTGCCGTCATTATTACATGGGTGCCAAGTTCTTTCAACAGGCTTTACAGT CTGCAAAACGACGGTCGCATCAGCTTTGGCTACAGCGTCGCCAGCGGCTAG |
| Gene | >OphauG2|3544 ATGATTAGCGATGGCAGCAGCATGCTCGAAGTCGGGTCGAGCCTGACGCCCAGCCAAATCTCGGCCCTCATCACG ATTGAGCGCACCGGCGCTGCCCTCTCCATGCTGGCCATCCTCTTGACCCTCGTGTCCTTTGGCCTCTTTTCCAAG CTGCGAACCATGCCCAACCATTTCCTCGCCTTGGCCTCTCTGGCCAATGCTGGCGCCAGCGTCGCCTCAATGATG GGATACGATGGCGTTGACAAGGGCCAAGACTCGTCTCTCTGTCAGGCCCAGGCCTTCATCTTTGAGTGGTGTGTC TGTCTTTGTTATGCTCCCCGTGCCGTGAACTAACGAGCCCAGGTTTATGCAGTCGGACCCGTGGTGGTCGTGTGC CATGGCCGTCAACGTGCTCTTGGTCTTCTTCTTCAACGTCAATCCCGTCAAGATCCATAAGCGTCTCTGGATCTA TTGTCTCGTGTGTTTTGGCGGTCCCTTGATTCCCGCCGTTATTCTCATTTGTCTTCAAGGAGATTCTCGAGGAGC CGTTTACGGCGATGCCACGGTTTGTCTCGTCTCTTCCAAGCCAATGCTCGCCAAAGGCTGTCGATAAAATTGACC ATGCTGACTGGTGGCAGCTTTGGTGCTGGATTGGACCCCAATGGAGTCTTGTTCGTCTTTATGCCTACTACATCC CCATTTGGCTGTGTCTCTTTACCTCGCTTGTCATCTATGTCTTGGTTGGCTGCCACGTCTTTCGCAGTCGCAACC AGCTTCGCCAGGTGGCTGGTCAAATGGGCAGTGTGCCCAATAGTCGGTCCAGGGTTGTTTTGGGCAGTAGAGACT CAGCCGAAGAGGCACGCTTCTCTCATGCCCTCTCTTCCTTGTACATTATGTTTACTGACAATTCTGCCTGGCAGC GTCTTACTGGCAATCCCGACGGCTGCGGCACAATTATGACGGAGCTACAGGTAACGTCTGGTCCATCTCCTCGTA AATGCCCTACTCCAATTCCGCTCTCGGATGAACACGGCTCAAGCTCTCGTTTGCCGTGGGTCGATTGCCACGTGG CAATGAGCAAAGGTATTGACGGCTTCCAGCATTTTGAGGTGGTGTGTCAGTCTAGCACCCAGGGCGCACGTCGCA AATCTTTGTTAGACAGGCTTCACTTGGGGGCCGTTTATAAAAGCATCACCCAGGCTTGGATCTCGGCTAGTCTGA AGCTCAAGTGCTTTGACGCGGTCAAGAGAGCCTACTTGCGCACCAGCGTCATTTTTGGACTTGCCGTCATTATTA CATGGGTGCCAAGTTCTTTCAACAGGCTTTACAGTCTGCAAAACGACGGTCGCATCAGCTTTGGCTACAGCGTCG CCAGCGGGTTTGTGCTTCCTCTGCAAGGAGTCTGGAACGCCATCATTTACTTTACGACAAGCTAG |