© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3470 |
| Gene name | |
| Location | Contig_263:10122..10992 |
| Strand | + |
| Gene length (bp) | 870 |
| Transcript length (bp) | 816 |
| Coding sequence length (bp) | 816 |
| Protein length (aa) | 272 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTK7|DSC2_SCHPO | DSC E3 ubiquitin ligase complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsc2 PE=1 SV=1 | 4 | 212 | 1.0E-22 |
| sp|Q8RXQ2|RBL18_ARATH | Rhomboid-like protein 18 OS=Arabidopsis thaliana GN=RBL18 PE=2 SV=1 | 3 | 214 | 2.0E-12 |
| sp|Q08232|YO073_YEAST | Uncharacterized membrane protein YOL073C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL073C PE=1 SV=1 | 3 | 208 | 2.0E-11 |
| sp|Q9LET3|RBL20_ARATH | Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1 | 3 | 194 | 5.0E-11 |
| sp|Q8R1K1|UBAC2_MOUSE | Ubiquitin-associated domain-containing protein 2 OS=Mus musculus GN=Ubac2 PE=1 SV=1 | 33 | 171 | 9.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTK7|DSC2_SCHPO | DSC E3 ubiquitin ligase complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsc2 PE=1 SV=1 | 4 | 212 | 1.0E-22 |
| sp|Q8RXQ2|RBL18_ARATH | Rhomboid-like protein 18 OS=Arabidopsis thaliana GN=RBL18 PE=2 SV=1 | 3 | 214 | 2.0E-12 |
| sp|Q08232|YO073_YEAST | Uncharacterized membrane protein YOL073C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL073C PE=1 SV=1 | 3 | 208 | 2.0E-11 |
| sp|Q9LET3|RBL20_ARATH | Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1 | 3 | 194 | 5.0E-11 |
| sp|Q8R1K1|UBAC2_MOUSE | Ubiquitin-associated domain-containing protein 2 OS=Mus musculus GN=Ubac2 PE=1 SV=1 | 33 | 171 | 9.0E-10 |
| sp|Q8NBM4|UBAC2_HUMAN | Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens GN=UBAC2 PE=1 SV=1 | 45 | 211 | 3.0E-08 |
| sp|Q4R910|UBAC2_MACFA | Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis GN=UBAC2 PE=2 SV=1 | 45 | 211 | 3.0E-08 |
| sp|Q5ZJQ8|UBAC2_CHICK | Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus GN=UBAC2 PE=2 SV=1 | 5 | 211 | 4.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 50 | 72 | 22 |
| 3 | 84 | 106 | 22 |
| 4 | 116 | 135 | 19 |
| 5 | 166 | 188 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3470 MTFTNAPVSRLAVLGLVSASIAASMLDMKHYFYIVIDAHLWRYRQFWRLLAYQLCCTNSADALFAAMTLYNLRAI ERLWGPRKYASFLAVSSLLTAVIPPFIMTILRPLSASLFNYMPAGPTPLIFAALAQFYAMVPHMYKYRIATSPLD EPFSGVTFSDKSYQYLIALHLALLQWPGSVVGAAVGWVVGHAWRGGVFPTALVAWRVPAWMVGMSASKRSAEFEG LRRRLESDNGASAVSSALQSHGQGSQRSDRRRTMGQQIVDQFREAL* |
| Coding | >OphauG2|3470 ATGACGTTTACCAATGCGCCCGTTAGCCGTTTGGCCGTTTTGGGCCTCGTTTCGGCCTCGATTGCCGCCAGCATG CTCGACATGAAGCATTATTTCTACATTGTTATTGACGCCCACCTATGGCGCTACCGTCAATTTTGGAGGCTGCTG GCGTACCAGCTCTGCTGCACAAACTCTGCCGATGCTCTTTTTGCCGCAATGACGCTCTACAATCTGAGAGCCATT GAGCGGCTTTGGGGGCCTCGCAAATACGCGTCCTTTCTTGCCGTGTCTTCGCTCCTTACGGCCGTAATCCCTCCC TTTATCATGACTATTCTCCGACCACTGTCGGCGTCTCTTTTCAACTACATGCCCGCGGGGCCGACGCCGCTGATA TTCGCTGCCCTGGCCCAATTCTACGCCATGGTGCCGCACATGTACAAGTACCGCATCGCCACGTCGCCCCTTGAC GAGCCGTTTTCGGGCGTCACCTTTTCGGACAAGTCGTATCAGTACCTCATTGCGCTGCATCTGGCGCTGCTGCAG TGGCCTGGCTCTGTTGTTGGGGCGGCGGTTGGCTGGGTCGTGGGCCATGCCTGGCGCGGTGGCGTCTTCCCGACG GCGCTTGTTGCCTGGCGGGTGCCAGCCTGGATGGTGGGAATGAGTGCCAGTAAGCGAAGTGCCGAGTTTGAAGGG TTGCGGAGGAGGCTCGAGAGCGACAATGGGGCTTCAGCCGTGTCGTCAGCGTTGCAGAGTCACGGCCAAGGGTCG CAGAGGTCGGACAGAAGACGTACCATGGGGCAGCAGATTGTGGATCAATTCCGCGAGGCGCTGTAG |
| Transcript | >OphauG2|3470 ATGACGTTTACCAATGCGCCCGTTAGCCGTTTGGCCGTTTTGGGCCTCGTTTCGGCCTCGATTGCCGCCAGCATG CTCGACATGAAGCATTATTTCTACATTGTTATTGACGCCCACCTATGGCGCTACCGTCAATTTTGGAGGCTGCTG GCGTACCAGCTCTGCTGCACAAACTCTGCCGATGCTCTTTTTGCCGCAATGACGCTCTACAATCTGAGAGCCATT GAGCGGCTTTGGGGGCCTCGCAAATACGCGTCCTTTCTTGCCGTGTCTTCGCTCCTTACGGCCGTAATCCCTCCC TTTATCATGACTATTCTCCGACCACTGTCGGCGTCTCTTTTCAACTACATGCCCGCGGGGCCGACGCCGCTGATA TTCGCTGCCCTGGCCCAATTCTACGCCATGGTGCCGCACATGTACAAGTACCGCATCGCCACGTCGCCCCTTGAC GAGCCGTTTTCGGGCGTCACCTTTTCGGACAAGTCGTATCAGTACCTCATTGCGCTGCATCTGGCGCTGCTGCAG TGGCCTGGCTCTGTTGTTGGGGCGGCGGTTGGCTGGGTCGTGGGCCATGCCTGGCGCGGTGGCGTCTTCCCGACG GCGCTTGTTGCCTGGCGGGTGCCAGCCTGGATGGTGGGAATGAGTGCCAGTAAGCGAAGTGCCGAGTTTGAAGGG TTGCGGAGGAGGCTCGAGAGCGACAATGGGGCTTCAGCCGTGTCGTCAGCGTTGCAGAGTCACGGCCAAGGGTCG CAGAGGTCGGACAGAAGACGTACCATGGGGCAGCAGATTGTGGATCAATTCCGCGAGGCGCTGTAG |
| Gene | >OphauG2|3470 ATGACGTTTACCAATGCGCCCGTTAGCCGTTTGGCCGTTTTGGGCCTCGTTTCGGCCTCGATTGCCGCCAGCATG CTCGACATGAAGCATTATTTCTACATTGTTATTGACGCCCACCTATGGCGCTACCGTCAATTTTGGAGGCTGCTG GCGTACCAGCTCTGCTGCACAAACTCTGCCGATGCTCTTTTTGCCGCAATGACGCTCTACAATCTGAGAGCCATT GAGCGGCTTTGGGGGCCTCGCAAATACGCGGTATGCCCGAGAGCCCGTTGCTTCGTGGCGCATTGGCGCTGCTAA CCATGGCAGTCCTTTCTTGCCGTGTCTTCGCTCCTTACGGCCGTAATCCCTCCCTTTATCATGACTATTCTCCGA CCACTGTCGGCGTCTCTTTTCAACTACATGCCCGCGGGGCCGACGCCGCTGATATTCGCTGCCCTGGCCCAATTC TACGCCATGGTGCCGCACATGTACAAGTACCGCATCGCCACGTCGCCCCTTGACGAGCCGTTTTCGGGCGTCACC TTTTCGGACAAGTCGTATCAGTACCTCATTGCGCTGCATCTGGCGCTGCTGCAGTGGCCTGGCTCTGTTGTTGGG GCGGCGGTTGGCTGGGTCGTGGGCCATGCCTGGCGCGGTGGCGTCTTCCCGACGGCGCTTGTTGCCTGGCGGGTG CCAGCCTGGATGGTGGGAATGAGTGCCAGTAAGCGAAGTGCCGAGTTTGAAGGGTTGCGGAGGAGGCTCGAGAGC GACAATGGGGCTTCAGCCGTGTCGTCAGCGTTGCAGAGTCACGGCCAAGGGTCGCAGAGGTCGGACAGAAGACGT ACCATGGGGCAGCAGATTGTGGATCAATTCCGCGAGGCGCTGTAG |