Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|3460
Gene name
LocationContig_262:47..808
Strand-
Gene length (bp)761
Transcript length (bp)696
Coding sequence length (bp)696
Protein length (aa) 232

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07798 CCDC90-like Coiled-coil domain-containing protein 90-like 1.4E-56 56 230

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P43557|FMP32_YEAST Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1 65 230 2.0E-45
sp|O14042|FMP32_SCHPO Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1 31 231 8.0E-34
sp|Q10073|YAN8_SCHPO Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.08c PE=3 SV=1 63 212 2.0E-17
sp|Q9CXD6|MCUR1_MOUSE Mitochondrial calcium uniporter regulator 1 OS=Mus musculus GN=Mcur1 PE=1 SV=1 52 229 7.0E-16
sp|Q96AQ8|MCUR1_HUMAN Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens GN=MCUR1 PE=1 SV=1 52 231 2.0E-14
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P43557|FMP32_YEAST Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1 65 230 2.0E-45
sp|O14042|FMP32_SCHPO Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1 31 231 8.0E-34
sp|Q10073|YAN8_SCHPO Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.08c PE=3 SV=1 63 212 2.0E-17
sp|Q9CXD6|MCUR1_MOUSE Mitochondrial calcium uniporter regulator 1 OS=Mus musculus GN=Mcur1 PE=1 SV=1 52 229 7.0E-16
sp|Q96AQ8|MCUR1_HUMAN Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens GN=MCUR1 PE=1 SV=1 52 231 2.0E-14
sp|Q0P4J6|MCUR1_XENTR Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis GN=mcur1 PE=2 SV=1 6 229 1.0E-13
sp|Q4V897|CC90B_RAT Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus GN=Ccdc90b PE=2 SV=1 42 229 1.0E-13
sp|Q8C3X2|CC90B_MOUSE Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus GN=Ccdc90b PE=1 SV=1 42 229 2.0E-13
sp|Q6DJ87|CC90B_XENTR Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis GN=ccdc90b PE=2 SV=2 42 229 2.0E-13
sp|Q9GZT6|CC90B_HUMAN Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens GN=CCDC90B PE=1 SV=2 42 229 2.0E-11
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 208 230 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|3460
MPVRLPAPFLPPRLRCALLPQPALQASPLLPPPRRRPPPPARALHASPVRLRDHHFDTLKFVRKLQSDGFTEEQS
VAMMKVLNDVIEESIQNLTRTMVLREDAAKATYTQKVDFAKLRSELLSADSTESNTTRADHERLNNDIAKLSSRL
RDEIGRTQASVRLDLNLEKGRIREEAVSQELKIKETETKIEQEVAALREKLEQVKFQTLQWLMGVCTGFAALMLG
AWRLLM*
Coding >OphauG2|3460
ATGCCCGTCCGTCTGCCTGCTCCATTTCTGCCGCCTCGGCTGCGCTGCGCCCTGCTGCCCCAGCCCGCGCTGCAA
GCCTCGCCATTGCTGCCGCCGCCTCGACGCCGCCCTCCCCCTCCCGCCCGAGCCCTTCACGCCTCGCCCGTCCGC
CTCCGCGACCACCACTTTGACACGCTCAAGTTTGTGCGGAAGCTGCAGAGCGATGGCTTCACCGAGGAGCAGTCG
GTAGCCATGATGAAGGTTCTCAACGACGTGATTGAAGAGAGCATCCAGAACCTCACTCGCACCATGGTGCTGCGC
GAAGACGCCGCCAAAGCCACATATACCCAAAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTCTCCGCCGAC
AGCACCGAGTCCAACACGACGCGCGCCGACCACGAACGCCTCAACAACGACATTGCAAAGCTAAGCAGCCGCCTG
CGCGACGAAATCGGCCGCACCCAAGCCAGCGTCCGCCTCGACCTCAACCTCGAAAAGGGCCGCATCCGCGAAGAG
GCTGTCAGCCAGGAGCTCAAGATCAAGGAAACCGAAACCAAAATCGAGCAAGAAGTCGCCGCCCTGCGCGAGAAG
CTTGAACAGGTCAAGTTTCAGACCCTACAGTGGCTCATGGGCGTCTGCACTGGCTTTGCCGCCTTGATGCTTGGT
GCTTGGCGTCTGCTAATGTAA
Transcript >OphauG2|3460
ATGCCCGTCCGTCTGCCTGCTCCATTTCTGCCGCCTCGGCTGCGCTGCGCCCTGCTGCCCCAGCCCGCGCTGCAA
GCCTCGCCATTGCTGCCGCCGCCTCGACGCCGCCCTCCCCCTCCCGCCCGAGCCCTTCACGCCTCGCCCGTCCGC
CTCCGCGACCACCACTTTGACACGCTCAAGTTTGTGCGGAAGCTGCAGAGCGATGGCTTCACCGAGGAGCAGTCG
GTAGCCATGATGAAGGTTCTCAACGACGTGATTGAAGAGAGCATCCAGAACCTCACTCGCACCATGGTGCTGCGC
GAAGACGCCGCCAAAGCCACATATACCCAAAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTCTCCGCCGAC
AGCACCGAGTCCAACACGACGCGCGCCGACCACGAACGCCTCAACAACGACATTGCAAAGCTAAGCAGCCGCCTG
CGCGACGAAATCGGCCGCACCCAAGCCAGCGTCCGCCTCGACCTCAACCTCGAAAAGGGCCGCATCCGCGAAGAG
GCTGTCAGCCAGGAGCTCAAGATCAAGGAAACCGAAACCAAAATCGAGCAAGAAGTCGCCGCCCTGCGCGAGAAG
CTTGAACAGGTCAAGTTTCAGACCCTACAGTGGCTCATGGGCGTCTGCACTGGCTTTGCCGCCTTGATGCTTGGT
GCTTGGCGTCTGCTAATGTAA
Gene >OphauG2|3460
ATGCCCGTCCGTCTGCCTGCTCCATTTCTGCCGCCTCGGCTGCGCTGCGCCCTGCTGCCCCAGCCCGCGCTGCAA
GCCTCGCCATTGCTGCCGCCGCCTCGACGCCGCCCTCCCCCTCCCGCCCGAGCCCTTCACGCCTCGCCCGTCCGC
CTCCGCGACCACCACTTTGACACGCTCAAGTTTGTGCGGAAGCTGCAGAGCGATGGCTTCACCGAGGAGCAGTCG
GTAGCCATGATGAAGGTTCTCAACGACGTGATTGAAGAGAGGTGACTCCCCTTTTCCCCTTTACAAAATAAAAAA
AAAAATAAACAAGTCGCCTCACACCCTCCAGCATCCAGAACCTCACTCGCACCATGGTGCTGCGCGAAGACGCCG
CCAAAGCCACATATACCCAAAAAGTCGACTTTGCCAAACTCCGCTCCGAGCTCCTCTCCGCCGACAGCACCGAGT
CCAACACGACGCGCGCCGACCACGAACGCCTCAACAACGACATTGCAAAGCTAAGCAGCCGCCTGCGCGACGAAA
TCGGCCGCACCCAAGCCAGCGTCCGCCTCGACCTCAACCTCGAAAAGGGCCGCATCCGCGAAGAGGCTGTCAGCC
AGGAGCTCAAGATCAAGGAAACCGAAACCAAAATCGAGCAAGAAGTCGCCGCCCTGCGCGAGAAGCTTGAACAGG
TCAAGTTTCAGACCCTACAGTGGCTCATGGGCGTCTGCACTGGCTTTGCCGCCTTGATGCTTGGTGCTTGGCGTC
TGCTAATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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