© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3443 |
| Gene name | |
| Location | Contig_26:45846..47681 |
| Strand | - |
| Gene length (bp) | 1835 |
| Transcript length (bp) | 1695 |
| Coding sequence length (bp) | 1695 |
| Protein length (aa) | 565 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.5E-23 | 93 | 509 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 54 | 287 | 7.0E-41 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 58 | 516 | 3.0E-26 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 63 | 516 | 1.0E-23 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 54 | 240 | 1.0E-20 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 282 | 563 | 2.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 54 | 287 | 7.0E-41 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 58 | 516 | 3.0E-26 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 63 | 516 | 1.0E-23 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 54 | 240 | 1.0E-20 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 282 | 563 | 2.0E-18 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 83 | 220 | 2.0E-08 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 87 | 269 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 96 | 115 | 19 |
| 2 | 128 | 147 | 19 |
| 3 | 152 | 174 | 22 |
| 4 | 186 | 208 | 22 |
| 5 | 228 | 250 | 22 |
| 6 | 338 | 360 | 22 |
| 7 | 375 | 397 | 22 |
| 8 | 418 | 440 | 22 |
| 9 | 450 | 472 | 22 |
| 10 | 511 | 533 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3443 MSSSPTHDGGNGTTSAPTTRHNAPRRPVAEIGDTLDDSAADINVKWAHLPRKDQLFIITLARLGEPLAQTSLQAY MFYQLKWFDPSLSDATISSQAGVLHAGFMGSQFATALLWGRIADSRWAGRKTVLLIGLIGAAISSLGFGFATHFY QALIFRIVGGVTNGNVGVMRTMISEIIREKRFQPRAFLLLPMTFHIGVIVGPILGGVLSDPAQSYPRFFGHVALF QSFPYALPNIASAVFLVVAAAAVWFALEETSEASRHAPPDMGIRLGHWLVAKLRGWHPIHKPQHLSYGTMQTSPD MERLSVLASPKPGRRYIQRLPFSHIFTRNVSLTLFAQFLLNFHLGTFNSLWFVFLSTPVWYSSIDPSHAPQLPFQ FTGGLGLHPTSVGLAMAILGAIRIPMQLFLYPDLAGRLGTLRAWRLSLLCFPLTYFLIPYLAVVPSASPPPEPKT GLTVWLAICVILFIQATGRTFSQPSQIILINNCSPHPSVLGTVHGLGQSATSGANTIGPMIGGFVYGIGLGAGVV GLVWWALSSIAICTCLASLLVGEGDGHEIWLPGDGEDDE* |
| Coding | >OphauG2|3443 ATGAGCTCAAGCCCTACTCATGATGGAGGAAATGGCACAACTTCAGCACCCACCACCAGGCACAATGCCCCCAGA CGCCCTGTGGCCGAGATTGGTGACACTCTGGACGATTCTGCAGCGGACATCAATGTCAAATGGGCCCATCTGCCG CGCAAAGACCAGCTCTTCATCATCACCCTGGCACGACTGGGCGAGCCGTTGGCACAGACATCGTTGCAGGCATAC ATGTTCTATCAACTCAAGTGGTTTGATCCATCGCTCTCCGATGCCACCATCTCTAGCCAGGCCGGCGTGCTGCAT GCCGGCTTCATGGGCTCCCAGTTTGCAACGGCATTGCTTTGGGGCCGCATCGCCGACTCGCGCTGGGCCGGACGG AAGACGGTGTTGCTGATTGGACTGATTGGAGCCGCCATCTCCAGTCTCGGCTTCGGCTTCGCAACCCACTTCTAC CAAGCCCTGATATTTCGTATCGTCGGGGGAGTCACAAATGGCAACGTTGGGGTCATGCGAACCATGATTAGCGAG ATCATCCGTGAAAAGAGATTCCAGCCTCGCGCCTTTCTGCTCCTCCCCATGACCTTCCATATTGGCGTCATTGTC GGTCCTATACTCGGTGGTGTCTTGTCCGACCCAGCTCAGAGCTATCCGCGTTTCTTTGGCCACGTCGCTCTATTT CAAAGCTTTCCCTATGCGCTGCCCAATATAGCGAGCGCTGTTTTCTTGGTCGTCGCCGCCGCCGCCGTCTGGTTC GCGCTTGAGGAAACGTCGGAAGCCTCACGTCATGCCCCCCCAGACATGGGCATTCGACTTGGTCACTGGCTAGTG GCCAAACTGCGTGGGTGGCACCCCATTCACAAGCCTCAGCACCTGAGCTACGGCACCATGCAAACGTCGCCCGAC ATGGAGCGCCTCTCGGTCTTGGCCAGCCCCAAGCCTGGTCGGCGGTACATACAACGGCTTCCTTTTAGCCACATC TTCACCCGCAATGTCTCCCTCACTCTTTTCGCGCAATTCTTGCTCAACTTCCATCTTGGAACCTTTAATTCGCTT TGGTTCGTTTTCCTGTCGACGCCCGTGTGGTATTCATCCATAGACCCTTCCCACGCGCCGCAGCTGCCCTTTCAA TTCACTGGTGGCCTCGGTCTGCATCCCACATCTGTTGGTCTTGCCATGGCTATCCTCGGTGCCATCAGGATTCCC ATGCAGCTCTTTCTCTATCCTGATCTGGCTGGACGCCTTGGTACCCTCCGGGCCTGGCGTCTCTCCCTCCTCTGC TTTCCACTGACTTACTTTTTGATACCCTACCTTGCTGTCGTGCCCAGTGCTTCGCCACCGCCGGAGCCCAAGACG GGACTTACTGTTTGGCTTGCAATTTGCGTCATTCTCTTCATCCAAGCCACTGGCCGCACCTTTTCGCAGCCCAGC CAAATCATTCTCATCAATAACTGCTCACCACATCCCAGTGTCCTCGGCACTGTTCATGGGCTCGGGCAGAGTGCT ACCAGTGGCGCTAATACCATTGGCCCCATGATTGGCGGCTTTGTTTATGGCATAGGGCTTGGCGCTGGAGTTGTT GGACTAGTATGGTGGGCTCTGAGTAGTATTGCCATCTGTACCTGCCTGGCAAGCCTGCTCGTTGGGGAAGGAGAC GGCCACGAGATATGGCTCCCAGGCGACGGGGAAGATGACGAATAA |
| Transcript | >OphauG2|3443 ATGAGCTCAAGCCCTACTCATGATGGAGGAAATGGCACAACTTCAGCACCCACCACCAGGCACAATGCCCCCAGA CGCCCTGTGGCCGAGATTGGTGACACTCTGGACGATTCTGCAGCGGACATCAATGTCAAATGGGCCCATCTGCCG CGCAAAGACCAGCTCTTCATCATCACCCTGGCACGACTGGGCGAGCCGTTGGCACAGACATCGTTGCAGGCATAC ATGTTCTATCAACTCAAGTGGTTTGATCCATCGCTCTCCGATGCCACCATCTCTAGCCAGGCCGGCGTGCTGCAT GCCGGCTTCATGGGCTCCCAGTTTGCAACGGCATTGCTTTGGGGCCGCATCGCCGACTCGCGCTGGGCCGGACGG AAGACGGTGTTGCTGATTGGACTGATTGGAGCCGCCATCTCCAGTCTCGGCTTCGGCTTCGCAACCCACTTCTAC CAAGCCCTGATATTTCGTATCGTCGGGGGAGTCACAAATGGCAACGTTGGGGTCATGCGAACCATGATTAGCGAG ATCATCCGTGAAAAGAGATTCCAGCCTCGCGCCTTTCTGCTCCTCCCCATGACCTTCCATATTGGCGTCATTGTC GGTCCTATACTCGGTGGTGTCTTGTCCGACCCAGCTCAGAGCTATCCGCGTTTCTTTGGCCACGTCGCTCTATTT CAAAGCTTTCCCTATGCGCTGCCCAATATAGCGAGCGCTGTTTTCTTGGTCGTCGCCGCCGCCGCCGTCTGGTTC GCGCTTGAGGAAACGTCGGAAGCCTCACGTCATGCCCCCCCAGACATGGGCATTCGACTTGGTCACTGGCTAGTG GCCAAACTGCGTGGGTGGCACCCCATTCACAAGCCTCAGCACCTGAGCTACGGCACCATGCAAACGTCGCCCGAC ATGGAGCGCCTCTCGGTCTTGGCCAGCCCCAAGCCTGGTCGGCGGTACATACAACGGCTTCCTTTTAGCCACATC TTCACCCGCAATGTCTCCCTCACTCTTTTCGCGCAATTCTTGCTCAACTTCCATCTTGGAACCTTTAATTCGCTT TGGTTCGTTTTCCTGTCGACGCCCGTGTGGTATTCATCCATAGACCCTTCCCACGCGCCGCAGCTGCCCTTTCAA TTCACTGGTGGCCTCGGTCTGCATCCCACATCTGTTGGTCTTGCCATGGCTATCCTCGGTGCCATCAGGATTCCC ATGCAGCTCTTTCTCTATCCTGATCTGGCTGGACGCCTTGGTACCCTCCGGGCCTGGCGTCTCTCCCTCCTCTGC TTTCCACTGACTTACTTTTTGATACCCTACCTTGCTGTCGTGCCCAGTGCTTCGCCACCGCCGGAGCCCAAGACG GGACTTACTGTTTGGCTTGCAATTTGCGTCATTCTCTTCATCCAAGCCACTGGCCGCACCTTTTCGCAGCCCAGC CAAATCATTCTCATCAATAACTGCTCACCACATCCCAGTGTCCTCGGCACTGTTCATGGGCTCGGGCAGAGTGCT ACCAGTGGCGCTAATACCATTGGCCCCATGATTGGCGGCTTTGTTTATGGCATAGGGCTTGGCGCTGGAGTTGTT GGACTAGTATGGTGGGCTCTGAGTAGTATTGCCATCTGTACCTGCCTGGCAAGCCTGCTCGTTGGGGAAGGAGAC GGCCACGAGATATGGCTCCCAGGCGACGGGGAAGATGACGAATAA |
| Gene | >OphauG2|3443 ATGAGCTCAAGCCCTACTCATGATGGAGGAAATGGCACAACTTCAGCACCCACCACCAGGCACAATGCCCCCAGA CGCCCTGTGGCCGAGATTGGTGACACTCTGGACGATTCTGCAGCGGACATCAATGTCAAATGGGCCCATCTGCCG CGCAAAGACCAGCTCTTCATCATCACCCTGGCACGACTGGGCGAGCCGTTGGCACAGACATCGTTGCAGGTGAGG CAAACCCCGCCAAGCCTCCAGTCACTTGCTACAACAGACTCCAAGTCGATGAGGCAGAGGAGATGACTGTTATCC TGCAGGCATACATGTTCTATCAACTCAAGTGGTTTGATCCATCGCTCTCCGATGCCACCATCTCTAGCCAGGCCG GCGTGCTGCATGCCGGCTTCATGGGCTCCCAGTTTGCAACGGCATTGCTTTGGGGCCGCATCGCCGACTCGCGCT GGGCCGGACGGAAGACGGTGTTGCTGATTGGACTGATTGGAGCCGCCATCTCCAGTCTCGGCTTCGGCTTCGCAA CCCACTTCTACCAAGCCCTGATATTTCGTATCGTCGGGGGAGTCACAAATGGCAACGTTGGGGTCATGCGAACCA TGTAAGTTGACAGACCAGCTCTCGTCCTACACGCTGCTTATGCGTCGACTCCAAGGATTAGCGAGATCATCCGTG AAAAGAGATTCCAGCCTCGCGCCTTTCTGCTCCTCCCCATGACCTTCCATATTGGCGTCATTGTCGGTCCTATAC TCGGTGGTGTCTTGTCCGACCCAGCTCAGAGCTATCCGCGTTTCTTTGGCCACGTCGCTCTATTTCAAAGCTTTC CCTATGCGCTGCCCAATATAGCGAGCGCTGTTTTCTTGGTCGTCGCCGCCGCCGCCGTCTGGTTCGCGCTTGAGG AAACGTCGGAAGCCTCACGTCATGCCCCCCCAGACATGGGCATTCGACTTGGTCACTGGCTAGTGGCCAAACTGC GTGGGTGGCACCCCATTCACAAGCCTCAGCACCTGAGCTACGGCACCATGCAAACGTCGCCCGACATGGAGCGCC TCTCGGTCTTGGCCAGCCCCAAGCCTGGTCGGCGGTACATACAACGGCTTCCTTTTAGCCACATCTTCACCCGCA ATGTCTCCCTCACTCTTTTCGCGCAATTCTTGCTCAACTTCCATCTTGGAACCTTTAATTCGCTTTGGTTCGTTT TCCTGTCGACGCCCGTGTGGTATTCATCCATAGACCCTTCCCACGCGCCGCAGCTGCCCTTTCAATTCACTGGTG GCCTCGGTCTGCATCCCACATCTGTTGGTCTTGCCATGGCTATCCTCGGTGCCATCAGGATTCCCATGCAGCTCT TTCTCTATCCTGATCTGGCTGGACGCCTTGGTACCCTCCGGGCCTGGCGTCTCTCCCTCCTCTGCTTTCCACTGA CTTACTTTTTGATACCCTACCTTGCTGTCGTGCCCAGTGCTTCGCCACCGCCGGAGCCCAAGACGGGACTTACTG TTTGGCTTGCAATTTGCGTCATTCTCTTCATCCAAGCCACTGGCCGCACCTTTTCGCAGCCCAGCCAAATCATTC TCATCAATAACTGCTCACCACATCCCAGTGTCCTCGGCACTGTTCATGGGCTCGGGCAGAGTGCTACCAGTGGCG CTAATACCATTGGCCCCATGATTGGCGGCTTTGTTTATGGCATAGGGCTTGGCGCTGGAGTTGTTGGACTAGTAT GGTGGGCTCTGAGTAGTATTGCCATCTGTACCTGCCTGGCAAGCCTGCTCGTTGGGGAAGGAGACGGCCACGAGA TATGGCTCCCAGGCGACGGGGAAGATGACGAATAA |