© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3442 |
| Gene name | |
| Location | Contig_26:44192..45150 |
| Strand | + |
| Gene length (bp) | 958 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16010 | CDH-cyt | Cytochrome domain of cellobiose dehydrogenase | 6.9E-18 | 28 | 189 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 226 | 248 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3442 MLSWRGFVTATLVALQVVSADQSPGQSTFVSPSNDLAFALTVPDNASSDIYFSLRSHRFNSWAAVGLGSHDMKGA LYLFIYPSLRGNNITFSPRLAYDNYEPFYFDKVGWEVLPGSGIDGEYIVFNARCFEHCRSWPAGSSDSGYIDVSS PSQRAIYALGPKEIFHSDNPAANLKYHREYGVFTIDMKRTQGVPDAPVLNSSSRSDGTFLDSSTHAGKDVLNMVH SVFMLFFMVVMFIGYTLARLNISCQSALSARMLSWSPGHRSCLPPLLTCH* |
| Coding | >OphauG2|3442 ATGTTGTCTTGGCGCGGCTTCGTGACTGCAACGCTGGTCGCGCTGCAGGTCGTCTCAGCAGACCAAAGCCCAGGC CAGTCGACTTTTGTCTCGCCATCGAATGACCTCGCGTTTGCCTTGACCGTGCCTGATAATGCAAGTTCGGATATC TACTTTAGTCTGCGCTCCCACAGGTTCAACTCCTGGGCTGCGGTTGGCCTCGGAAGCCATGACATGAAAGGGGCC CTCTATCTCTTCATCTATCCCAGCTTGCGAGGCAACAATATCACTTTTTCGCCTCGCCTCGCCTATGACAACTAT GAGCCCTTTTATTTTGACAAGGTCGGCTGGGAGGTCCTTCCGGGCTCTGGAATTGATGGCGAATACATCGTGTTC AACGCCCGCTGCTTCGAGCACTGCCGTAGCTGGCCCGCCGGCTCATCAGACAGCGGCTATATCGATGTCAGCTCG CCCAGCCAAAGGGCCATTTATGCCCTCGGTCCCAAGGAAATTTTCCACAGCGATAATCCAGCTGCCAACCTCAAA TACCATCGCGAGTACGGCGTCTTCACCATTGACATGAAGCGCACTCAGGGCGTTCCAGATGCGCCTGTTCTGAAC AGCTCGTCTCGAAGCGACGGCACTTTTCTCGACTCCAGCACACATGCCGGCAAAGATGTCTTGAACATGGTGCAC TCAGTCTTCATGTTGTTCTTCATGGTCGTCATGTTCATTGGCTACACATTGGCTCGTCTCAACATTTCATGTCAG TCTGCATTATCAGCGCGTATGTTGTCATGGTCTCCTGGGCACCGCTCATGCCTGCCACCATTGCTCACCTGTCAC TAG |
| Transcript | >OphauG2|3442 ATGTTGTCTTGGCGCGGCTTCGTGACTGCAACGCTGGTCGCGCTGCAGGTCGTCTCAGCAGACCAAAGCCCAGGC CAGTCGACTTTTGTCTCGCCATCGAATGACCTCGCGTTTGCCTTGACCGTGCCTGATAATGCAAGTTCGGATATC TACTTTAGTCTGCGCTCCCACAGGTTCAACTCCTGGGCTGCGGTTGGCCTCGGAAGCCATGACATGAAAGGGGCC CTCTATCTCTTCATCTATCCCAGCTTGCGAGGCAACAATATCACTTTTTCGCCTCGCCTCGCCTATGACAACTAT GAGCCCTTTTATTTTGACAAGGTCGGCTGGGAGGTCCTTCCGGGCTCTGGAATTGATGGCGAATACATCGTGTTC AACGCCCGCTGCTTCGAGCACTGCCGTAGCTGGCCCGCCGGCTCATCAGACAGCGGCTATATCGATGTCAGCTCG CCCAGCCAAAGGGCCATTTATGCCCTCGGTCCCAAGGAAATTTTCCACAGCGATAATCCAGCTGCCAACCTCAAA TACCATCGCGAGTACGGCGTCTTCACCATTGACATGAAGCGCACTCAGGGCGTTCCAGATGCGCCTGTTCTGAAC AGCTCGTCTCGAAGCGACGGCACTTTTCTCGACTCCAGCACACATGCCGGCAAAGATGTCTTGAACATGGTGCAC TCAGTCTTCATGTTGTTCTTCATGGTCGTCATGTTCATTGGCTACACATTGGCTCGTCTCAACATTTCATGTCAG TCTGCATTATCAGCGCGTATGTTGTCATGGTCTCCTGGGCACCGCTCATGCCTGCCACCATTGCTCACCTGTCAC TAG |
| Gene | >OphauG2|3442 ATGTTGTCTTGGCGCGGCTTCGTGACTGCAACGCGTCAGTCCTTTCTCCTCTTCAGTCCGCCATTTGGCTTTCGC TAATACCCCTGGTCGTAGTGGTCGCGCTGCAGGTCGTCTCAGCAGACCAAAGCCCAGGCCAGTCGACTTTTGTCT CGCCATCGAATGACCTCGCGTTTGCCTTGACCGTGCCTGATAATGCAAGTTCGGATATCTACTTTAGTCTGCGCT CCCACAGGTTCAACTCCTGGGCTGCGGTTGGCCTCGGAAGCCATGACATGAAAGGGGCCCTCTATCTCTTCATCT ATCCCAGCTTGCGAGGCAACAATATCACTTTTTCGCCTCGCCTCGCCTATGACAACTATGAGCCCTTTTATTTTG ACAAGGTCGGCTGGGAGGTCCTTCCGGGCTCTGGAATTGATGGCGAATACATCGTGTTCAACGCCCGCTGCTTCG AGCACTGCCGTAGCTGGCCCGCCGGCTCATCAGACAGCGGCTATATCGATGTCAGCTCGCCCAGCCAAAGGGCCA TTTATGCCCTCGGTCCCAAGGAAATTTTCCACAGCGATAATCCAGCTGCCAACCTCAAATACCATCGCGAGTACG GCGTCTTCACCATTGACATGAAGCGCACTCAGGGCGTTCCAGATGCGCCTGTTCTGAACAGCTCGTCTCGAAGCG ACGGCACTTTTCTCGACTCCAGCACACATGCCGGCAAAGATGTCTTGAACATGGTGCACTCAGTCTTCATGTTGT TCTTCATGGTCGTCATGTTCATTGGCTACACATTGGCTCGTCTCAACATTTCATGGTTAATTCAATCCTCGATTC AGTTTACCGCATTTTCTACCGCCATCCTCGGCAGCTGTTTTGGTATCCTAGTCAGTCTGCATTATCAGCGCGTAT GTTGTCATGGTCTCCTGGGCACCGCTCATGCCTGCCACCATTGCTCACCTGTCACTAG |