© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3404 |
| Gene name | |
| Location | Contig_258:6486..8218 |
| Strand | + |
| Gene length (bp) | 1732 |
| Transcript length (bp) | 1380 |
| Coding sequence length (bp) | 1380 |
| Protein length (aa) | 460 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.4E-22 | 72 | 416 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 31 | 458 | 9.0E-35 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 92 | 22 |
| 2 | 102 | 124 | 22 |
| 3 | 157 | 179 | 22 |
| 4 | 189 | 211 | 22 |
| 5 | 218 | 240 | 22 |
| 6 | 275 | 297 | 22 |
| 7 | 310 | 332 | 22 |
| 8 | 336 | 358 | 22 |
| 9 | 363 | 385 | 22 |
| 10 | 400 | 422 | 22 |
| 11 | 429 | 451 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3404 MAAPAKNIPGPKQQVVLYSDNCEAQQEHTVDQPGMDPEAGGGPNETSPLIRNISCETWKDPRRNLYRLATCFWSF LLMGANDASYGALIPYLEKYYHVSHGSVSFVFLSPTIGYIASAISNHYLHIKLGQRGVAVIAGACHAAAYSIMSS HPPFRILVLSYVLVGFGNGVVDCGWNAWVSSLDSASQLLGLLHACYGAGGVIGPLLATALITKAKLEWYTFCYIM VGLAGIESVVMSWAFWDLTASKYRHGHGPDAKEPKAGLYATLFEKPAAQVCWTAASFLFILVGMEVALGGWIVTF MLDERHTDKFASGMVSVVFWLGMTMGRAILGFLTPALGAQYSTMVYMVFAMAALVVFWMVPVFYVSVIAVASMGL FIGPLFPNVILMVNMLLPRQMHVTAIGFASAIGGSGAAVMPFVTGILAQYANGVKVLPPVILALQGVTFVLWNCF PAMNKARQG* |
| Coding | >OphauG2|3404 ATGGCAGCCCCAGCCAAGAATATTCCAGGACCAAAGCAACAGGTGGTGCTTTACTCAGACAACTGTGAAGCCCAA CAGGAACATACTGTTGACCAGCCTGGAATGGACCCTGAAGCTGGTGGCGGACCCAACGAAACAAGCCCCTTGATT AGAAACATCTCTTGCGAGACATGGAAGGATCCTAGACGCAATCTATATCGGCTAGCCACCTGTTTTTGGTCTTTT CTTCTTATGGGAGCCAACGATGCCTCTTATGGGGCCCTAATACCTTATCTCGAAAAGTATTACCACGTTAGCCAC GGGTCGGTATCGTTCGTCTTCTTGTCGCCCACTATCGGCTACATTGCATCAGCCATTAGCAACCACTATTTACAC ATCAAGCTGGGACAGCGCGGTGTCGCTGTGATAGCTGGAGCATGCCATGCGGCTGCATATAGCATCATGAGCAGT CATCCTCCATTTAGAATCCTCGTCTTGTCGTACGTCTTGGTTGGCTTTGGAAACGGGGTTGTCGACTGCGGGTGG AATGCCTGGGTAAGCAGCCTGGACAGCGCAAGCCAGCTTCTCGGTCTGTTGCATGCTTGTTATGGTGCTGGCGGC GTCATTGGGCCCTTGCTTGCGACTGCTCTCATAACAAAGGCCAAACTTGAGTGGTATACCTTTTGCTACATAATG GTTGGCCTTGCTGGAATCGAAAGTGTCGTCATGTCATGGGCGTTTTGGGACTTGACTGCATCGAAATACCGCCAT GGACATGGCCCAGACGCAAAAGAGCCCAAAGCCGGGCTATACGCGACACTGTTTGAAAAGCCGGCTGCACAAGTC TGCTGGACTGCAGCTTCGTTCCTTTTCATCTTGGTGGGAATGGAAGTGGCCCTCGGCGGATGGATAGTGACCTTT ATGCTCGATGAGCGTCACACGGATAAATTTGCCAGCGGCATGGTGTCGGTTGTCTTTTGGCTAGGCATGACAATG GGGAGAGCGATTCTGGGCTTTCTGACTCCGGCACTTGGGGCACAGTACTCGACCATGGTTTACATGGTGTTTGCC ATGGCGGCGCTCGTGGTGTTTTGGATGGTGCCCGTCTTCTACGTGTCCGTCATTGCCGTGGCCTCGATGGGCCTC TTTATCGGGCCCCTGTTTCCAAATGTGATTTTGATGGTCAACATGTTGCTGCCTCGACAAATGCACGTTACTGCC ATAGGGTTTGCATCTGCGATTGGAGGAAGCGGAGCTGCGGTGATGCCTTTTGTGACGGGCATCTTGGCTCAGTAT GCCAACGGAGTCAAGGTGCTGCCGCCCGTTATACTGGCGTTGCAGGGTGTCACGTTTGTCTTGTGGAATTGTTTT CCGGCAATGAACAAGGCAAGACAAGGCTAG |
| Transcript | >OphauG2|3404 ATGGCAGCCCCAGCCAAGAATATTCCAGGACCAAAGCAACAGGTGGTGCTTTACTCAGACAACTGTGAAGCCCAA CAGGAACATACTGTTGACCAGCCTGGAATGGACCCTGAAGCTGGTGGCGGACCCAACGAAACAAGCCCCTTGATT AGAAACATCTCTTGCGAGACATGGAAGGATCCTAGACGCAATCTATATCGGCTAGCCACCTGTTTTTGGTCTTTT CTTCTTATGGGAGCCAACGATGCCTCTTATGGGGCCCTAATACCTTATCTCGAAAAGTATTACCACGTTAGCCAC GGGTCGGTATCGTTCGTCTTCTTGTCGCCCACTATCGGCTACATTGCATCAGCCATTAGCAACCACTATTTACAC ATCAAGCTGGGACAGCGCGGTGTCGCTGTGATAGCTGGAGCATGCCATGCGGCTGCATATAGCATCATGAGCAGT CATCCTCCATTTAGAATCCTCGTCTTGTCGTACGTCTTGGTTGGCTTTGGAAACGGGGTTGTCGACTGCGGGTGG AATGCCTGGGTAAGCAGCCTGGACAGCGCAAGCCAGCTTCTCGGTCTGTTGCATGCTTGTTATGGTGCTGGCGGC GTCATTGGGCCCTTGCTTGCGACTGCTCTCATAACAAAGGCCAAACTTGAGTGGTATACCTTTTGCTACATAATG GTTGGCCTTGCTGGAATCGAAAGTGTCGTCATGTCATGGGCGTTTTGGGACTTGACTGCATCGAAATACCGCCAT GGACATGGCCCAGACGCAAAAGAGCCCAAAGCCGGGCTATACGCGACACTGTTTGAAAAGCCGGCTGCACAAGTC TGCTGGACTGCAGCTTCGTTCCTTTTCATCTTGGTGGGAATGGAAGTGGCCCTCGGCGGATGGATAGTGACCTTT ATGCTCGATGAGCGTCACACGGATAAATTTGCCAGCGGCATGGTGTCGGTTGTCTTTTGGCTAGGCATGACAATG GGGAGAGCGATTCTGGGCTTTCTGACTCCGGCACTTGGGGCACAGTACTCGACCATGGTTTACATGGTGTTTGCC ATGGCGGCGCTCGTGGTGTTTTGGATGGTGCCCGTCTTCTACGTGTCCGTCATTGCCGTGGCCTCGATGGGCCTC TTTATCGGGCCCCTGTTTCCAAATGTGATTTTGATGGTCAACATGTTGCTGCCTCGACAAATGCACGTTACTGCC ATAGGGTTTGCATCTGCGATTGGAGGAAGCGGAGCTGCGGTGATGCCTTTTGTGACGGGCATCTTGGCTCAGTAT GCCAACGGAGTCAAGGTGCTGCCGCCCGTTATACTGGCGTTGCAGGGTGTCACGTTTGTCTTGTGGAATTGTTTT CCGGCAATGAACAAGGCAAGACAAGGCTAG |
| Gene | >OphauG2|3404 ATGGCAGCCCCAGCCAAGAATATTCCAGGACCAAAGCAACAGGTGGTGCTTTACTCAGACAACTGTGAAGCCCAA CAGGAACATACTGTTGACCAGCCTGGAATGGACCCTGAAGCTGGTGGCGGACCCAACGAAACAAGCCCCTTGATT AGAAACATCTCTTGCGAGACATGGAAGGATCCTAGACGCAATCTATATCGGCTAGCCACCTGTTTTTGGTCTTTT CTTCTTATGGGAGCCAACGATGCCTCTTATGGGGTATGTCTCATCAGAGGAAACAAGAAACAAGAACCCCCCCCC CCCCCCAAAAAAAAAAAGAAGAAGCCGCCTCGAAACCCCGCACCAAAACACGCAAAGATACAAGATTACTGACTT GTCTGTCTCTGTTGTTAGGCCCTAATACCTTATGTGAGATGAATCATAGCCCTTCTATCCCGAGCTGGGTAGGTA ATATTGACATGGCATCGACTTCAAGCTCGAAAAGTATTACCACGTTAGCCACGGGTCGGTATCGTTCGTCTTCTT GTCGCCCACTATCGGCTACATTGCATCAGCCATTAGCAACCACTATTTACACATCAAGCTGGGACAGCGCGGTGT CGCTGTGATAGCTGGAGCATGCCATGCGGCTGCATATAGCATCATGAGCAGTCATCCTCCATTTAGAATCCTCGT CTTGTCGTACGTCTTGGTTGGCTTTGGAAACGGGGTTGTCGACTGCGGGTGGAATGCCTGGGTAAGCAGCCTGGA CAGCGCAAGCCAGCTTCTCGGTCTGTTGCATGCTTGTTATGGTGCTGGCGGCGTCATTGGGCCCTTGCTTGCGAC TGCTCTCATAACAAAGGCCAAACTTGAGTGGTATACCTTTTGCTACATAATGGTTAGTTGCCCTACCCCCTTTTT TTGTGGTCTTGGCTTGGCTGCTGGCAAGAAAGAAGCATGGGCTTAGGGCGTTTGTTGCAGGTTGGCCTTGCTGGA ATCGAAAGTGTCGTCATGTCATGGGCGTTTTGGGACTTGACTGCATCGAAATACCGCCATGGACATGGCCCAGAC GCAAAAGAGCCCAAAGCCGGGCTATACGCGACACTGTTTGAAAAGCCGGCTGCACAAGTCTGCTGGACTGCAGCT TCGTTCCTTTTCATCTTGGTGGGAATGGAAGTGGCCCTCGGCGGATGGATAGTGACCTTTATGCTCGATGAGCGT CACACGGATAAATTTGCCAGCGGCATGGTGTCGGTTGTCTTTTGGCTAGGCATGACAATGGGGAGAGCGATTCTG GGCTTTCTGACTCCGGCACTTGGGGCACAGTACTCGACCATGGTGAGCCTGGTGATTGGGCAAAAGACGAGGAAA AAGAAGGCAGCTTACCAAGAGCGGCTCCATCTAGGTTTACATGGTGTTTGCCATGGCGGCGCTCGTGGTGTTTTG GATGGTGCCCGTCTTCTACGTGTCCGTCATTGCCGTGGCCTCGATGGGCCTCTTTATCGGGCCCCTGTTTCCAAA TGTGATTTTGATGGTCAACATGTTGCTGCCTCGACAAATGCACGTTACTGCCATAGGGTTTGCATCTGCGATTGG AGGAAGCGGAGCTGCGGTGATGCCTTTTGTGACGGGCATCTTGGCTCAGTATGCCAACGGAGTCAAGGTGCTGCC GCCCGTTATACTGGCGTTGCAGGGTGTCACGTTTGTCTTGTGGAATTGTTTTCCGGCAATGAACAAGGCAAGACA AGGCTAG |