© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|335 |
| Gene name | |
| Location | Contig_1073:592..2616 |
| Strand | - |
| Gene length (bp) | 2024 |
| Transcript length (bp) | 1617 |
| Coding sequence length (bp) | 1617 |
| Protein length (aa) | 539 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 3.1E-24 | 98 | 233 |
| PF08031 | BBE | Berberine and berberine like | 1.5E-06 | 481 | 522 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 74 | 519 | 2.0E-22 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 69 | 525 | 6.0E-22 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 74 | 523 | 3.0E-14 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 100 | 523 | 6.0E-10 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 1 | 340 | 6.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 74 | 519 | 2.0E-22 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 69 | 525 | 6.0E-22 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 74 | 523 | 3.0E-14 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 100 | 523 | 6.0E-10 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 1 | 340 | 6.0E-08 |
| sp|Q8C0I1|ADAS_MOUSE | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1 | 100 | 266 | 7.0E-08 |
| sp|Q9EQR2|ADAS_RAT | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1 | 100 | 269 | 1.0E-07 |
| sp|P97275|ADAS_CAVPO | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1 | 100 | 269 | 5.0E-07 |
| sp|O00116|ADAS_HUMAN | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 | 100 | 269 | 9.0E-07 |
| sp|P94535|GLCD_BACSU | Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 | 73 | 285 | 3.0E-06 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 196 | 269 | 5.0E-06 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 95 | 347 | 5.0E-06 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 99 | 263 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 16 | 0.995596 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| AA7 | 4.9E-54 | 89 | 518 |
| Orthofinder run ID | 4 |
| Orthogroup | 256 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|335 MMILLPLILATGFQHAATFAGAEHQASEHQDSASCPSNAVHAIDQNPDALSLSTRSPARLLLSPAHNWSARTVIA FPGQRQFHDLTERWSVYAPPTYSAVISPATEQDLVKIVNLATRHNLSFLATGGRHGYGTTLGKLRNGLAIDLGQL DDIDIDQTAGTLTVGPGVLMGDVMLPVHDAGYQIQTSSCTTPSMIGVTLGGGITRWSGIYGLISDALTSARIVTA SGQVVDVSHKSHPNLFWGLRGAGFNFGIVTRASYQLHSLPSAARSVVNLDLIFSANQTAAYFALLASYSASMPAR LVISTAILWHADTNAPALRANWVYLGPEPDAQRAMAPVLQLVPLVANMSVVAWHELLSVQRFGVDAKSSVKGSLR AVYTVNVRQLEAAAFEAAFTTMAGFYAAHPGAQNSFVEFETFPNQAAASVPGNTSAYPWRDAVGNFLFVFSWNQG DSAAAQASTLVGNHLRQTFAQSSGYPHLSVYVSYAHGDEPLESIYGAEQLPRLAALKKEWDPSNVFAYNNPLPTQ YQDAQRFLTPSLA* |
| Coding | >OphauG2|335 ATGATGATTCTTTTGCCGCTCATCCTTGCAACTGGCTTCCAACATGCCGCTACATTTGCGGGTGCCGAGCATCAA GCCTCAGAGCATCAAGATTCAGCCTCCTGTCCCAGCAATGCCGTGCATGCAATTGACCAGAATCCAGATGCTCTC AGCTTGAGCACTCGCAGCCCAGCCCGTCTGCTTCTCAGCCCCGCCCACAACTGGTCGGCGCGAACCGTCATTGCC TTCCCCGGCCAGCGCCAATTCCACGACCTGACTGAGCGATGGAGCGTCTACGCCCCTCCGACCTACTCGGCCGTC ATCAGCCCCGCGACGGAGCAAGACTTGGTCAAGATTGTCAACCTCGCCACTCGGCATAATCTATCCTTTCTCGCC ACCGGCGGCCGACACGGATACGGCACCACGCTTGGGAAGCTCAGAAACGGCCTGGCCATTGACCTCGGCCAACTC GATGACATTGACATTGACCAGACTGCCGGAACGCTGACTGTTGGCCCCGGGGTTCTCATGGGCGACGTGATGCTC CCAGTCCATGATGCGGGATACCAGATTCAAACAAGCTCATGCACCACGCCCAGCATGATTGGCGTCACTCTCGGC GGCGGCATCACTCGCTGGTCTGGAATCTACGGCCTCATCTCCGACGCCTTGACTTCCGCACGCATCGTAACTGCC AGCGGCCAAGTCGTGGACGTCAGCCACAAGTCACACCCAAATCTCTTTTGGGGCCTGCGCGGCGCCGGCTTCAAC TTTGGCATCGTGACAAGGGCCTCGTACCAGCTTCACAGCCTGCCCTCTGCCGCCCGCTCCGTCGTCAATCTCGAC CTCATCTTTTCCGCCAACCAGACCGCTGCCTACTTTGCCCTTTTAGCATCCTACAGCGCATCCATGCCGGCGCGC CTTGTCATTTCCACCGCCATCCTCTGGCACGCAGACACCAACGCGCCTGCACTTCGAGCCAATTGGGTCTACCTA GGCCCCGAGCCCGACGCCCAACGAGCAATGGCCCCCGTCCTCCAACTCGTACCGCTCGTGGCCAACATGAGCGTC GTTGCATGGCACGAGCTGCTCTCGGTGCAGCGCTTTGGCGTCGATGCCAAAAGCTCCGTCAAGGGGTCCCTTCGA GCCGTCTACACCGTCAATGTCCGCCAGCTCGAGGCCGCTGCGTTTGAAGCTGCCTTTACCACCATGGCAGGCTTT TATGCAGCTCACCCCGGCGCACAAAACAGCTTTGTCGAGTTTGAAACCTTTCCCAATCAAGCCGCGGCCTCGGTC CCGGGAAATACGAGTGCGTATCCATGGCGAGACGCAGTCGGCAATTTTCTCTTTGTCTTTTCCTGGAATCAAGGC GACTCCGCCGCCGCCCAAGCTTCAACCCTCGTCGGAAACCATCTCCGCCAGACATTTGCCCAGAGCTCTGGATAC CCCCATCTATCCGTCTACGTCAGCTACGCGCACGGCGACGAGCCTCTTGAGAGCATCTACGGCGCCGAGCAGCTG CCTCGCCTGGCTGCTCTTAAAAAGGAATGGGATCCCTCCAATGTGTTTGCCTATAATAATCCGTTGCCTACACAG TACCAAGACGCCCAGCGTTTTTTGACGCCGTCTCTGGCATAG |
| Transcript | >OphauG2|335 ATGATGATTCTTTTGCCGCTCATCCTTGCAACTGGCTTCCAACATGCCGCTACATTTGCGGGTGCCGAGCATCAA GCCTCAGAGCATCAAGATTCAGCCTCCTGTCCCAGCAATGCCGTGCATGCAATTGACCAGAATCCAGATGCTCTC AGCTTGAGCACTCGCAGCCCAGCCCGTCTGCTTCTCAGCCCCGCCCACAACTGGTCGGCGCGAACCGTCATTGCC TTCCCCGGCCAGCGCCAATTCCACGACCTGACTGAGCGATGGAGCGTCTACGCCCCTCCGACCTACTCGGCCGTC ATCAGCCCCGCGACGGAGCAAGACTTGGTCAAGATTGTCAACCTCGCCACTCGGCATAATCTATCCTTTCTCGCC ACCGGCGGCCGACACGGATACGGCACCACGCTTGGGAAGCTCAGAAACGGCCTGGCCATTGACCTCGGCCAACTC GATGACATTGACATTGACCAGACTGCCGGAACGCTGACTGTTGGCCCCGGGGTTCTCATGGGCGACGTGATGCTC CCAGTCCATGATGCGGGATACCAGATTCAAACAAGCTCATGCACCACGCCCAGCATGATTGGCGTCACTCTCGGC GGCGGCATCACTCGCTGGTCTGGAATCTACGGCCTCATCTCCGACGCCTTGACTTCCGCACGCATCGTAACTGCC AGCGGCCAAGTCGTGGACGTCAGCCACAAGTCACACCCAAATCTCTTTTGGGGCCTGCGCGGCGCCGGCTTCAAC TTTGGCATCGTGACAAGGGCCTCGTACCAGCTTCACAGCCTGCCCTCTGCCGCCCGCTCCGTCGTCAATCTCGAC CTCATCTTTTCCGCCAACCAGACCGCTGCCTACTTTGCCCTTTTAGCATCCTACAGCGCATCCATGCCGGCGCGC CTTGTCATTTCCACCGCCATCCTCTGGCACGCAGACACCAACGCGCCTGCACTTCGAGCCAATTGGGTCTACCTA GGCCCCGAGCCCGACGCCCAACGAGCAATGGCCCCCGTCCTCCAACTCGTACCGCTCGTGGCCAACATGAGCGTC GTTGCATGGCACGAGCTGCTCTCGGTGCAGCGCTTTGGCGTCGATGCCAAAAGCTCCGTCAAGGGGTCCCTTCGA GCCGTCTACACCGTCAATGTCCGCCAGCTCGAGGCCGCTGCGTTTGAAGCTGCCTTTACCACCATGGCAGGCTTT TATGCAGCTCACCCCGGCGCACAAAACAGCTTTGTCGAGTTTGAAACCTTTCCCAATCAAGCCGCGGCCTCGGTC CCGGGAAATACGAGTGCGTATCCATGGCGAGACGCAGTCGGCAATTTTCTCTTTGTCTTTTCCTGGAATCAAGGC GACTCCGCCGCCGCCCAAGCTTCAACCCTCGTCGGAAACCATCTCCGCCAGACATTTGCCCAGAGCTCTGGATAC CCCCATCTATCCGTCTACGTCAGCTACGCGCACGGCGACGAGCCTCTTGAGAGCATCTACGGCGCCGAGCAGCTG CCTCGCCTGGCTGCTCTTAAAAAGGAATGGGATCCCTCCAATGTGTTTGCCTATAATAATCCGTTGCCTACACAG TACCAAGACGCCCAGCGTTTTTTGACGCCGTCTCTGGCATAG |
| Gene | >OphauG2|335 ATGATGATTCTTTTGCCGCTCATCCTTGCAACTGGCTTCCAACATGCCGCTACATTTGCGGGTGCCGAGCATCAA GCCTCAGAGCATCAAGATTCAGCCTCCTGTCCCAGCAATGCCGTGCATGCAATTGACCAGAATCCAGATGCTCTC AGCTTGAGCACTCGCAGCCCAGCCCGTCTGCTTCTCAGCCCCGCCCACAACTGGTCGGCGCGAACCGTCATTGCC TTCCCCGGCCAGCGCCAATTCCACGACCTGACTGAGCGATGGAGCGTCTACGCCCCTCCGACCTACTCGGCCGTC ATCAGCCCCGCGACGGAGCAAGACTTGGTCAAGATTGTATGCAGCAAGAAGAAGAGAAAAAAAAAACATGGCCTC AACGACTGCTGACAATCGTCTCCCAAATCTATAGGTCAACCTCGCCACTCGGCATAATCTATCCTTTCTCGCCAC CGGCGGCCGACACGGATACGGCACCACGCTTGGGAAGCTCAGAAACGGCCTGGCCATTGACCTCGGCCAACTCGA TGACATTGACATTGACCAGACTGCCGGAACGCTGACTGTTGGCCCCGGGGTTCTCATGGGCGACGTGATGCTCCC AGTCCATGATGCGGGATACCAGATTCGTAAGTCTACCAAGTTTTAGGCCCTCGACGTCTTGTTAACTCGGAGCCT TTACAAAAAAAAAAAAAATACAAAAAAAAAAGAAACAAGCTCATGCACCACGCCCAGCATGATTGGCGTCACTCT CGGCGGCGGCATCACTCGCTGGTCTGGAATCTACGGCCTCATCTCCGACGCCTTGACTTCCGCACGCATCGTAAC TGCCAGCGGCCAAGTCGTGGACGTCAGCCACAAGTCACACCCAAATCTCTTTTGGGGCCTGCGCGGCGCCGGCTT CAACTTTGGCATCGTGACAAGGGCCTCGTACCAGCTTCACAGCCTGCCCTCTGCCGCCCGCTCCGTCGTCAATCT CGACCTCATCTTTTCCGCCAACCAGACCGCTGCCTACTTTGCCCTTTTAGCATCCTACAGCGCATCCATGCCGGC GCGCCTTGTCATTTCCACCGCCATCCTCTGGCACGCAGACACCAACGCGGTAAAGACGAAAGAAGAAGAAACTCC CCTCTCCCAGCATACAACTAACTCTTGATTGCCCCCCCCCCCCCCCCCCCCCCCCTCTCCAGCCTGCACTTCGAG CCAATTGGGTCTACCTAGGCCCCGAGCCCGACGCCCAACGAGCAATGGCCCCCGTCCTCCAACTCGTACCGCTCG TGGCCAACATGAGCGTCGTTGCATGGCACGAGCTGCTCTCGGTGCAGCGCTTTGGCGTCGATGCCAAAAGCTCCG TCAAGGGGTCCCTTCGAGCCGTCTACACCGTCAATGTCCGCCAGCTCGAGGCCGCTGCGTTTGAAGCTGCCTTTA CCACCATGGCAGGCTTTTATGCAGCTCACCCCGGCGCACAAAACAGCTTTGTCGAGTTTGAAACCTTTCCCAATC AAGCCGCGGCCTCGGTCCCGGGAAATACGAGTGCGTATCCATGGCGAGACGCAGTCGGCAATTTGTACGTTGTCT TGAACACCCCTTTTTTTTCTTCAACACCACCTTTCTTATTCAAAGACCAAAAAAGAAAAGAAAAAAAAGAAAAAA AAGAAAAAAAAAGAAAAGAAAAAAGAAAAAAAAAAAGAGAAAAGAGTGGACAATGCCACTAATGACTCGGGACGT ATAGTCTCTTTGTCTTTTCCTGGAATCAAGGCGACTCCGCCGCCGCCCAAGCTTCAACCCTCGTCGGAAACCATC TCCGCCAGACATTTGCCCAGAGCTCTGGATACCCCCATCTATCCGTCTACGTCAGCTACGCGCACGGCGACGAGC CTCTTGAGAGCATCTACGGCGCCGAGCAGCTGCCTCGCCTGGCTGCTCTTAAAAAGGAATGGGATCCCTCCAATG TGTTTGCCTATAATAATCCGTTGCCTACACAGTACCAAGACGCCCAGCGTTTTTTGACGCCGTCTCTGGCATAG |