© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|333 |
| Gene name | |
| Location | Contig_1072:1724..2640 |
| Strand | + |
| Gene length (bp) | 916 |
| Transcript length (bp) | 852 |
| Coding sequence length (bp) | 852 |
| Protein length (aa) | 284 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF17172 | GST_N_4 | Glutathione S-transferase N-terminal domain | 5.9E-14 | 59 | 156 |
| PF17171 | GST_C_6 | Glutathione S-transferase, C-terminal domain | 1.1E-13 | 205 | 269 |
| PF10568 | Tom37 | Outer mitochondrial membrane transport complex protein | 2.4E-08 | 61 | 156 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9HE00|MTX1_SCHPO | Metaxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mtx1 PE=3 SV=1 | 16 | 242 | 4.0E-15 |
| sp|Q2TBS1|MTX1_BOVIN | Metaxin-1 OS=Bos taurus GN=MTX1 PE=2 SV=1 | 45 | 278 | 5.0E-06 |
| sp|Q3KPT9|MTX3_XENLA | Metaxin-3 OS=Xenopus laevis GN=mtx3 PE=2 SV=2 | 51 | 238 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0001401 | SAM complex | Yes |
| GO:0098796 | membrane protein complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:0005742 | mitochondrial outer membrane translocase complex | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0098799 | outer mitochondrial membrane protein complex | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|333 MASSHRWLPDAPSPVHALFRRFPLSVYDPSPLPGGPRADRPQLFIFTCRTGSDRPSFNPRCLKWQLWLRICGIDV ETHASNPHASPNRSLPFLIPALNDSDPHSTITFSRIAAYARHHSSYQEPSVPSLRLDTYLSLFDQAIRPAWLHTL YLVPENECLINVLFIPQSSLLRPSLLRNLRLEAHQSIISIHRHSRYSPDILLHNASKAFQALDKLLGSQDYFFDA PSPTIFDATVFSYTHLILPNSSLHWIQNPLRPSLDDCHNLQRHRRLLYARYFPVKLDS* |
| Coding | >OphauG2|333 ATGGCCTCTTCCCACCGCTGGCTCCCCGACGCCCCGTCCCCCGTCCACGCCCTCTTTCGTCGCTTTCCTCTGTCC GTCTACGACCCCTCTCCTCTTCCCGGAGGGCCTCGTGCCGACCGGCCCCAGCTCTTCATCTTTACTTGTCGCACC GGCTCCGACCGCCCCAGCTTCAACCCACGCTGCCTCAAGTGGCAGCTCTGGCTACGCATATGCGGCATTGACGTC GAAACTCACGCCTCCAATCCCCATGCTTCGCCAAATCGCTCTCTGCCTTTTCTCATCCCCGCTCTCAACGACTCG GACCCACACTCAACCATCACCTTTTCGCGTATAGCTGCCTATGCTCGCCACCACTCTTCTTACCAAGAACCCTCC GTTCCCTCTCTTCGCTTGGACACGTATCTCTCTCTCTTTGACCAGGCCATTCGGCCCGCATGGCTCCATACTCTC TACCTCGTTCCAGAAAACGAGTGCCTCATCAATGTTCTCTTTATTCCCCAGTCAAGCCTACTACGTCCCTCATTG CTCCGCAATCTTCGCCTCGAGGCTCATCAGTCCATCATCTCCATCCATCGCCACTCCCGCTACAGTCCCGACATT CTCCTCCACAATGCCTCAAAGGCTTTCCAGGCTCTCGACAAGCTTCTCGGCTCCCAAGACTACTTCTTTGATGCC CCTTCACCAACAATCTTCGACGCCACCGTCTTCTCCTACACCCACTTGATTCTTCCCAACAGCTCTCTTCACTGG ATACAAAATCCTCTTCGCCCCTCTCTCGACGACTGCCACAACTTGCAGCGTCACCGCAGACTCCTCTATGCTCGC TACTTTCCCGTCAAGCTTGACTCATGA |
| Transcript | >OphauG2|333 ATGGCCTCTTCCCACCGCTGGCTCCCCGACGCCCCGTCCCCCGTCCACGCCCTCTTTCGTCGCTTTCCTCTGTCC GTCTACGACCCCTCTCCTCTTCCCGGAGGGCCTCGTGCCGACCGGCCCCAGCTCTTCATCTTTACTTGTCGCACC GGCTCCGACCGCCCCAGCTTCAACCCACGCTGCCTCAAGTGGCAGCTCTGGCTACGCATATGCGGCATTGACGTC GAAACTCACGCCTCCAATCCCCATGCTTCGCCAAATCGCTCTCTGCCTTTTCTCATCCCCGCTCTCAACGACTCG GACCCACACTCAACCATCACCTTTTCGCGTATAGCTGCCTATGCTCGCCACCACTCTTCTTACCAAGAACCCTCC GTTCCCTCTCTTCGCTTGGACACGTATCTCTCTCTCTTTGACCAGGCCATTCGGCCCGCATGGCTCCATACTCTC TACCTCGTTCCAGAAAACGAGTGCCTCATCAATGTTCTCTTTATTCCCCAGTCAAGCCTACTACGTCCCTCATTG CTCCGCAATCTTCGCCTCGAGGCTCATCAGTCCATCATCTCCATCCATCGCCACTCCCGCTACAGTCCCGACATT CTCCTCCACAATGCCTCAAAGGCTTTCCAGGCTCTCGACAAGCTTCTCGGCTCCCAAGACTACTTCTTTGATGCC CCTTCACCAACAATCTTCGACGCCACCGTCTTCTCCTACACCCACTTGATTCTTCCCAACAGCTCTCTTCACTGG ATACAAAATCCTCTTCGCCCCTCTCTCGACGACTGCCACAACTTGCAGCGTCACCGCAGACTCCTCTATGCTCGC TACTTTCCCGTCAAGCTTGACTCATGA |
| Gene | >OphauG2|333 ATGGCCTCTTCCCACCGCTGGCTCCCCGACGCCCCGTCCCCCGTCCACGCCCTCTTTCGTCGCTTTCCTCTGTCC GTCTACGACCCCTCTCCTCTTCCCGGAGGGCCTCGTGCCGACCGGCCCCAGCTCTTCATCTTTACTTGTCGCACC GGCTCCGACCGCCCCAGCTTCAACCCACGCTGCCTCAAGTGGCAGCTCTGGCTACGCATATGCGGCATTGACGTC GAAACTCACGCCTCCAATCCCCATGCTTCGCCAAATCGCTCTCTGCCTTTTCTCATCCCCGCTCTCAACGACTCG GACCCACACTCAACCATCACCTTTTCGCGTATAGCTGCCTATGCTCGCCACCACTCTTCTTACCAAGAACCCTCC GTTCCCTCTCTTCGCTTGGACACGTATCTCTCTCTCTTTGACCAGGCCATTCGGCCCGCATGGGTGAGTTGCACT CGCCTCTGCCTCCTCCTCGTTCCGCCCGCGCTAACAATGCCTCTCATATTAGCTCCATACTCTCTACCTCGTTCC AGAAAACGAGTGCCTCATCAATGTTCTCTTTATTCCCCAGTCAAGCCTACTACGTCCCTCATTGCTCCGCAATCT TCGCCTCGAGGCTCATCAGTCCATCATCTCCATCCATCGCCACTCCCGCTACAGTCCCGACATTCTCCTCCACAA TGCCTCAAAGGCTTTCCAGGCTCTCGACAAGCTTCTCGGCTCCCAAGACTACTTCTTTGATGCCCCTTCACCAAC AATCTTCGACGCCACCGTCTTCTCCTACACCCACTTGATTCTTCCCAACAGCTCTCTTCACTGGATACAAAATCC TCTTCGCCCCTCTCTCGACGACTGCCACAACTTGCAGCGTCACCGCAGACTCCTCTATGCTCGCTACTTTCCCGT CAAGCTTGACTCATGA |