Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3305
Gene name
Location	Contig_248:7419..7994
Strand	+
Gene length (bp)	575
Transcript length (bp)	468
Coding sequence length (bp)	468
Protein length (aa)	156

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01284	MARVEL	Membrane-associating domain	6.4E-16	8	137

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 29	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	9	31	22
2	46	68	22
3	80	102	22
4	122	144	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3305 MAALDRIFSLILRAAELAFASIVAGVTGQYLHNAKASASAWALGRWIYTETVAGLSILLALIWLFPFSRTFTHWP IDLLVSILWWAAFGLIVHLIGSRCGAVFDWQNVSPRGDECGKFKADIAFAFLSAILWLVSAIIGLFWTRRHERYN RRSHV*
Coding	>OphauG2\|3305 ATGGCCGCTCTCGATCGCATCTTTAGTCTCATTTTGCGTGCTGCCGAGCTCGCCTTTGCCTCCATTGTCGCGGGC GTCACGGGCCAATACCTGCACAATGCCAAGGCCAGCGCCAGCGCCTGGGCACTGGGTCGCTGGATCTACACGGAA ACCGTGGCTGGCTTGTCCATACTACTGGCTCTCATATGGCTTTTCCCCTTTTCCAGGACCTTTACCCACTGGCCC ATCGATTTACTCGTCAGCATTCTATGGTGGGCCGCGTTTGGCCTCATCGTGCATCTGATTGGATCGCGGTGCGGC GCCGTCTTTGACTGGCAGAACGTATCTCCACGTGGAGATGAGTGCGGAAAATTCAAGGCCGATATTGCCTTTGCC TTCCTGTCTGCCATCCTTTGGCTCGTCTCGGCAATTATTGGCCTTTTCTGGACCCGGCGACACGAGCGCTACAAC CGTCGCAGCCACGTTTGA
Transcript	>OphauG2\|3305 ATGGCCGCTCTCGATCGCATCTTTAGTCTCATTTTGCGTGCTGCCGAGCTCGCCTTTGCCTCCATTGTCGCGGGC GTCACGGGCCAATACCTGCACAATGCCAAGGCCAGCGCCAGCGCCTGGGCACTGGGTCGCTGGATCTACACGGAA ACCGTGGCTGGCTTGTCCATACTACTGGCTCTCATATGGCTTTTCCCCTTTTCCAGGACCTTTACCCACTGGCCC ATCGATTTACTCGTCAGCATTCTATGGTGGGCCGCGTTTGGCCTCATCGTGCATCTGATTGGATCGCGGTGCGGC GCCGTCTTTGACTGGCAGAACGTATCTCCACGTGGAGATGAGTGCGGAAAATTCAAGGCCGATATTGCCTTTGCC TTCCTGTCTGCCATCCTTTGGCTCGTCTCGGCAATTATTGGCCTTTTCTGGACCCGGCGACACGAGCGCTACAAC CGTCGCAGCCACGTTTGA
Gene	>OphauG2\|3305 ATGGCCGCTCTCGATCGCATCTTTAGTCTCATTTTGCGTGCTGCCGAGCTCGCCTTTGCCTCCATTGTCGCGGGC GTCACGGGCCAATACCTGCACAATGCCAAGGCCAGCGCCAGCGCCTGGGCACTGGGTCGCTGGATCTACACGGAA ACCGTGGCTGGCTTGTCCATACTACTGGCTCTCATATGGCTTTTCCCCTTTTCCAGGACCTTTACCCACTGGCCC ATCGATTTACTCGTCAGCATTCTATGGTGGGCCGCGTTTGGCCTCATCGTGCATGTAAGCCAAAGCTTCCCAAAG CTTCCCAAAGCTTCCCAAAGCCTCACAGAGCCTCACAAAGCTTCATTTTGCTTTCCGCCACTGGCTAGCTGACCT ACTCTCAACAGCTGATTGGATCGCGGTGCGGCGCCGTCTTTGACTGGCAGAACGTATCTCCACGTGGAGATGAGT GCGGAAAATTCAAGGCCGATATTGCCTTTGCCTTCCTGTCTGCCATCCTTTGGCTCGTCTCGGCAATTATTGGCC TTTTCTGGACCCGGCGACACGAGCGCTACAACCGTCGCAGCCACGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail