Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|3284
Gene name
LocationContig_246:430..2894
Strand-
Gene length (bp)2464
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06087 Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase 3.0E-87 117 543

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9NUW8|TYDP1_HUMAN Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens GN=TDP1 PE=1 SV=2 150 540 5.0E-06

GO

GO Term Description Terminal node
GO:0006281 DNA repair Yes
GO:0008081 phosphoric diester hydrolase activity Yes
GO:0005634 nucleus Yes
GO:0006950 response to stress No
GO:0046483 heterocycle metabolic process No
GO:0009987 cellular process No
GO:0043229 intracellular organelle No
GO:0016787 hydrolase activity No
GO:0043227 membrane-bounded organelle No
GO:0008152 metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0006259 DNA metabolic process No
GO:0008150 biological_process No
GO:0042578 phosphoric ester hydrolase activity No
GO:0043231 intracellular membrane-bounded organelle No
GO:0044238 primary metabolic process No
GO:0043226 organelle No
GO:0033554 cellular response to stress No
GO:0110165 cellular anatomical entity No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003824 catalytic activity No
GO:0044237 cellular metabolic process No
GO:0051716 cellular response to stimulus No
GO:0044260 cellular macromolecule metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0071704 organic substance metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0050896 response to stimulus No
GO:1901360 organic cyclic compound metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5011
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3284 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|2781
Ophiocordyceps camponoti-floridani Ophcf2|06051
Ophiocordyceps camponoti-rufipedis Ophun1|3150
Ophiocordyceps kimflemingae Ophio5|2524
Ophiocordyceps subramaniannii Hirsu2|2451

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|3284
MAKSHQDLPEPNSDGEDDADIRYAIALSLQDQQSAMPQQTAAAAPEASQSLGLLGLDRKKMEEERLARLAGSKRL
RSPDAIQVESGPPRKKNVAARAVSAQDTNANACKMPFTEGVVKRTWVRGYPRTGDDIKIEEVLQRQDLQLAVVSS
YQWDEEWLLAKVDLHRTKMLFVAFAAHDSQKTAIRANMPSSIKFCFPEMHGPGSMHSKLQLLRFPSHLRVVVPTG
NLVPYDWGETGAMENMVFLIDLPRLKDGVSFVPTPFSTELMRFVRALGLDDKMVTSLSNYDFCKTAHVGFVFSRP
GSHQDESEMKRIGYCGLATAVAELGLASTAPIQIDVATASLGSIKWDWVESVYKACQGNDGIKEHGRSATGAARK
SGNKRQCEWLKDRFRIYFPTNQTVTDSRGGSAAAGTICFQASWWRRPDFPTELMRDCINTRPGLLMHTKIILVHR
LGLGDAKAGGWAYVGSANLSESAWGRMTTDRQTRKAKMNCRNWECGVVVPAGGKTSSDSKPVSGGTGGDDDAVAD
VVVFDGTVPVPMQVPARPNREPWFYAS*
Coding >OphauG2|3284
ATGGCCAAGTCGCATCAGGACCTGCCCGAACCCAACAGTGATGGCGAAGACGACGCTGATATTCGATATGCCATT
GCGCTGTCGCTACAAGACCAGCAGAGCGCCATGCCACAACAGACGGCGGCTGCGGCTCCAGAAGCCTCCCAGTCG
CTGGGATTGCTGGGGCTCGACCGCAAAAAGATGGAGGAGGAGCGGTTGGCACGACTGGCTGGTTCCAAGCGACTT
CGTTCACCAGACGCAATCCAAGTCGAGTCGGGACCACCACGCAAGAAAAACGTGGCTGCCAGAGCTGTCTCTGCC
CAGGATACAAATGCCAATGCTTGTAAGATGCCCTTTACCGAGGGCGTTGTCAAGCGCACCTGGGTCCGTGGCTAT
CCCCGGACGGGCGACGACATCAAGATTGAAGAGGTGCTCCAGAGACAGGATTTGCAGCTCGCCGTGGTCTCGTCG
TATCAATGGGATGAAGAATGGCTGCTAGCCAAGGTTGATCTCCATCGCACCAAAATGCTCTTTGTGGCCTTTGCT
GCCCATGATAGCCAGAAAACGGCTATCCGTGCCAACATGCCGTCAAGCATCAAATTTTGCTTCCCGGAAATGCAT
GGGCCCGGAAGCATGCACTCTAAACTGCAGCTCCTAAGGTTTCCGAGTCACCTACGCGTCGTTGTGCCCACAGGC
AATCTTGTTCCCTACGACTGGGGCGAGACAGGTGCCATGGAAAACATGGTATTCCTTATCGATCTTCCACGCCTA
AAAGATGGCGTTAGTTTTGTGCCAACACCCTTCAGCACCGAATTGATGCGTTTTGTGAGGGCTCTGGGCCTTGAT
GACAAAATGGTGACGAGTCTGTCCAACTATGACTTTTGCAAAACAGCCCACGTGGGCTTTGTATTTAGCAGACCT
GGATCTCACCAGGATGAGTCAGAAATGAAGCGAATCGGATACTGCGGCCTGGCGACGGCAGTAGCCGAGCTGGGT
CTGGCCTCCACTGCGCCCATTCAAATTGACGTTGCGACTGCCTCTCTCGGATCCATTAAATGGGACTGGGTCGAG
TCCGTATACAAGGCTTGCCAAGGGAACGATGGCATCAAGGAGCATGGCCGAAGCGCAACAGGAGCAGCTCGCAAG
TCTGGCAACAAGCGGCAATGTGAATGGCTGAAGGATCGATTCCGCATCTATTTTCCCACAAATCAGACGGTGACC
GATAGCCGCGGCGGCAGCGCAGCTGCGGGGACTATATGCTTTCAGGCAAGCTGGTGGCGACGCCCAGATTTCCCG
ACGGAGCTCATGCGCGACTGTATCAATACACGCCCGGGCCTCCTGATGCACACAAAGATAATACTAGTTCACAGG
CTAGGCTTGGGCGATGCGAAGGCTGGGGGCTGGGCGTATGTGGGAAGCGCAAACTTGTCAGAGAGTGCATGGGGC
CGGATGACAACTGACCGACAGACGCGCAAAGCCAAGATGAACTGCCGCAATTGGGAGTGCGGTGTGGTGGTGCCA
GCTGGCGGCAAGACTAGCAGCGACAGCAAGCCTGTGTCCGGCGGCACCGGTGGTGATGACGACGCCGTGGCCGAT
GTGGTTGTCTTTGATGGCACAGTGCCCGTTCCGATGCAGGTCCCGGCGCGGCCCAACAGGGAGCCGTGGTTCTAT
GCTAGTTGA
Transcript >OphauG2|3284
ATGGCCAAGTCGCATCAGGACCTGCCCGAACCCAACAGTGATGGCGAAGACGACGCTGATATTCGATATGCCATT
GCGCTGTCGCTACAAGACCAGCAGAGCGCCATGCCACAACAGACGGCGGCTGCGGCTCCAGAAGCCTCCCAGTCG
CTGGGATTGCTGGGGCTCGACCGCAAAAAGATGGAGGAGGAGCGGTTGGCACGACTGGCTGGTTCCAAGCGACTT
CGTTCACCAGACGCAATCCAAGTCGAGTCGGGACCACCACGCAAGAAAAACGTGGCTGCCAGAGCTGTCTCTGCC
CAGGATACAAATGCCAATGCTTGTAAGATGCCCTTTACCGAGGGCGTTGTCAAGCGCACCTGGGTCCGTGGCTAT
CCCCGGACGGGCGACGACATCAAGATTGAAGAGGTGCTCCAGAGACAGGATTTGCAGCTCGCCGTGGTCTCGTCG
TATCAATGGGATGAAGAATGGCTGCTAGCCAAGGTTGATCTCCATCGCACCAAAATGCTCTTTGTGGCCTTTGCT
GCCCATGATAGCCAGAAAACGGCTATCCGTGCCAACATGCCGTCAAGCATCAAATTTTGCTTCCCGGAAATGCAT
GGGCCCGGAAGCATGCACTCTAAACTGCAGCTCCTAAGGTTTCCGAGTCACCTACGCGTCGTTGTGCCCACAGGC
AATCTTGTTCCCTACGACTGGGGCGAGACAGGTGCCATGGAAAACATGGTATTCCTTATCGATCTTCCACGCCTA
AAAGATGGCGTTAGTTTTGTGCCAACACCCTTCAGCACCGAATTGATGCGTTTTGTGAGGGCTCTGGGCCTTGAT
GACAAAATGGTGACGAGTCTGTCCAACTATGACTTTTGCAAAACAGCCCACGTGGGCTTTGTATTTAGCAGACCT
GGATCTCACCAGGATGAGTCAGAAATGAAGCGAATCGGATACTGCGGCCTGGCGACGGCAGTAGCCGAGCTGGGT
CTGGCCTCCACTGCGCCCATTCAAATTGACGTTGCGACTGCCTCTCTCGGATCCATTAAATGGGACTGGGTCGAG
TCCGTATACAAGGCTTGCCAAGGGAACGATGGCATCAAGGAGCATGGCCGAAGCGCAACAGGAGCAGCTCGCAAG
TCTGGCAACAAGCGGCAATGTGAATGGCTGAAGGATCGATTCCGCATCTATTTTCCCACAAATCAGACGGTGACC
GATAGCCGCGGCGGCAGCGCAGCTGCGGGGACTATATGCTTTCAGGCAAGCTGGTGGCGACGCCCAGATTTCCCG
ACGGAGCTCATGCGCGACTGTATCAATACACGCCCGGGCCTCCTGATGCACACAAAGATAATACTAGTTCACAGG
CTAGGCTTGGGCGATGCGAAGGCTGGGGGCTGGGCGTATGTGGGAAGCGCAAACTTGTCAGAGAGTGCATGGGGC
CGGATGACAACTGACCGACAGACGCGCAAAGCCAAGATGAACTGCCGCAATTGGGAGTGCGGTGTGGTGGTGCCA
GCTGGCGGCAAGACTAGCAGCGACAGCAAGCCTGTGTCCGGCGGCACCGGTGGTGATGACGACGCCGTGGCCGAT
GTGGTTGTCTTTGATGGCACAGTGCCCGTTCCGATGCAGGTCCCGGCGCGGCCCAACAGGGAGCCGTGGTTCTAT
GCTAGTTGA
Gene >OphauG2|3284
ATGGCCAAGTCGCATCAGGACCTGCCCGAACCCAACAGTGATGGCGAAGACGACGCTGATATTCGATATGCCATT
GCGCTGTCGCTACAAGACCAGCAGAGCGCCATGCCACAACAGACGGCGGCTGCGGCTCCAGAAGCCTCCCAGTCG
CTGGGATTGCTGGGGCTCGACCGCAAAAAGATGGAGGAGGAGCGGTTGGCACGACTGGCTGGTTCCAAGCGACTT
CGTTCACCAGACGCAATCCAAGTCGAGTCGGGACCACCACGCAAGAAAAACGTGGCTGCCAGAGCTGTCTCTGCC
CAGGATACAAATGCCAATGCTTGTAAGATGCCCTTTACCGAGGGCGTTGTCAAGCGCACCTGGGTCCGTGGCTAT
CCCCGGACGGGCGACGACATCAAGATTGAAGAGGTGCTCCAGAGACAGGATTTGCAGCTCGCCGTGGTCTCGTCG
TATCAATGGGATGAAGAATGGCTGCTAGCCAAGGTTGATCTCCATCGCACCAAAATGCTCTTTGTGGCCTTTGCT
GCCCATGATAGCCAGGCAAGTTTGCTACCCTACATGAGGCTGGCTACCATGATGCTAATAGGACTAATAATATAT
GTGCTGGATAGAAAACGGCTATCCGTGCCAACATGCCGTCAAGCATCAAATTTTGCTTCCCGGAAATGCATGGGC
CCGGAAGCATGCACTCTAAACTGCAGCTCCTAAGGTTTCCGAGTCACCTACGCGTCGTTGTGCCCACAGGCAATC
TTGTTCCCTACGACTGGGGCGAGACAGGTGCCATGGAAAACGTGGGCTAGCCGTTTACCCCTAGCGAAATATTCC
GGTACTATGTTTCTGGCTGACCTGCAAGGGAGGGGGCAGATGGTATTCCTTATCGATCTTCCACGCCTAAAAGAT
GGCGTTAGTTTTGTGCCAACACCCTTCAGCACCGAATTGATGCGTTTTGTGAGGGCTCTGGGCCTTGATGACAAA
ATGGTGACGAGTCTGTCCAACTATGACTTTTGCAAAACAGCCCACGTGGGCTTTGTATTTAGCAGGTATGTTTGG
TTATTCGCGCATTCTATCAAGTCACAAGTCGGTAGCCAAGATTGACAATGGGCGTCAAGACCTGGATCTCACCAG
GATGAGTCAGAAATGAAGCGAATCGGTCCGTCACACACCCCTTGTCCCGTCTTGTCGAGGCCACGGTACTCGGTA
CAGATGTCATAATTTACCCATGGGCTAAATGGTAGCTCAGGATACTGCGGCCTGGCGACGGCAGTAGCCGAGCTG
GGTCTGGCCTCCACTGCGCCCATTCAAATTGACGTTGCGGCACGTTTATTCCTCTGGCCACCAGCAAGGTGTGAT
TTGCTTGGGCGTGCTGACACGACGATAGACTGCCTCTCTCGGATCCATTAAATGGGACTGGGTCGAGTCCGTATA
CAAGGCTTGCCAAGGTATGTCTGTCTAGTCGGAGCTGTATGTGGCATACTCCGTACTCCGTATAGTGCTGCTACT
ATTGCCGAGTACTTGTATTAGGTAGCTTTACGCCCGAGCAGGATAAGTTTTCCCCCTCCTTAGCCCTGCCCCTTC
TTTACCCGCTCAATGCTCCTCTTTTAACCCGCGAGCGACGGCGAATCCTAGACAGACCGATAGGAGCCCGGGTGG
AACGCGGGACGTGGGCCGTTTTACATATTGACATGGTGCAGGGAACGATGGCATCAAGGAGCATGGCCGAAGCGC
AACAGGAGCAGCTCGCAAGTCTGGCAACAAGCGGCAATGTGAATGGCTGAAGGATCGATTCCGCATCTATTTTCC
CACAAATCAGACGGTGACCGATAGCCGCGGCGGCAGCGCAGTAAGTGGGACTTTGCTGATGCAAGGCGCACGGAG
TCGCGCGATGCCAGGTCTATTGGACAGTTGGGTGGGCTAATCAATCCATTCGTTGCCGACACGCCACTCATAGGC
TGCGGGGACTATATGCTTTCAGGCAAGCTGGTGGCGACGCCCAGATTTCCCGACGGAGCTCATGCGCGACTGTAT
CAATACACGCCCGGGCCTCCTGATGCACACAAAGATAATACTAGTTCACAGGCTAGGCTTGGGCGATGCGAAGGC
TGGGGGCTGGGCGTATGTGGGAAGCGCAAACTTGTCAGAGAGTGCATGGTGAGTAATGGGGAGAAAGTTGTCTGT
CTAGCCGACCAATATAATATGTAGCTAACGCGGCCTGGTGATTGTGGCTAGGGGCCGGATGACAACTGACCGACA
GACGCGCAAAGCCAAGATGAACTGCCGCAATTGGGAGTGCGGTGTGGTGGTGCCAGCTGGCGGCAAGACTAGCAG
CGACAGCAAGCCTGTGTCCGGCGGCACCGGTGGTGATGACGACGCCGTGGCCGATGTGGTTGTCTTTGATGGCAC
AGTGCCCGTTCCGATGCAGGTCCCGGCGCGGCCCAACAGGGAGCCGTGGTTCTATGCTAGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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