© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3259 |
| Gene name | |
| Location | Contig_242:16075..16857 |
| Strand | - |
| Gene length (bp) | 782 |
| Transcript length (bp) | 534 |
| Coding sequence length (bp) | 534 |
| Protein length (aa) | 178 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13932|BET1_SCHPO | Protein transport protein bet1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bet1 PE=3 SV=1 | 86 | 174 | 8.0E-21 |
| sp|P22804|BET1_YEAST | Protein transport protein BET1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BET1 PE=1 SV=1 | 1 | 176 | 4.0E-20 |
| sp|Q62896|BET1_RAT | BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1 | 81 | 177 | 1.0E-07 |
| sp|O35623|BET1_MOUSE | BET1 homolog OS=Mus musculus GN=Bet1 PE=1 SV=1 | 67 | 177 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 154 | 176 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3259 MASRFGGSSLHQRDSRSALFEGYTGESSTRRTATASPGGYGFPSAYGPNAPGAAGANPYADGVPRTGSGFRPATP NKRGQYSDAVLNELESQNDAQVVGIMGKVKTLKDMTMAIGDEIRESSALADKMNDSFDSTRLRLRGTMNRMLLMA QRTGISWRVWLAFFAAVILLFIYVWLF* |
| Coding | >OphauG2|3259 ATGGCGTCAAGGTTTGGCGGGTCGTCGCTGCATCAGCGCGACTCTCGCAGTGCCTTGTTTGAGGGCTACACGGGC GAGTCGTCAACGCGGCGCACCGCAACAGCAAGTCCTGGTGGCTACGGCTTCCCATCCGCATACGGCCCCAATGCC CCGGGCGCAGCCGGCGCCAATCCCTATGCCGACGGCGTACCGCGCACCGGCAGCGGCTTTCGTCCCGCGACCCCT AACAAACGTGGCCAGTACAGCGACGCAGTCCTGAATGAGCTCGAGAGCCAGAACGATGCGCAGGTGGTGGGGATT ATGGGAAAAGTCAAGACACTCAAGGATATGACAATGGCGATTGGCGATGAAATTCGAGAATCATCGGCTTTGGCG GATAAGATGAACGATTCATTCGACTCAACGCGCCTGCGCCTTCGCGGCACTATGAATCGCATGCTCCTCATGGCC CAGCGCACCGGCATCAGCTGGAGGGTCTGGCTCGCCTTCTTCGCCGCCGTCATTCTTCTCTTTATCTATGTCTGG CTGTTTTGA |
| Transcript | >OphauG2|3259 ATGGCGTCAAGGTTTGGCGGGTCGTCGCTGCATCAGCGCGACTCTCGCAGTGCCTTGTTTGAGGGCTACACGGGC GAGTCGTCAACGCGGCGCACCGCAACAGCAAGTCCTGGTGGCTACGGCTTCCCATCCGCATACGGCCCCAATGCC CCGGGCGCAGCCGGCGCCAATCCCTATGCCGACGGCGTACCGCGCACCGGCAGCGGCTTTCGTCCCGCGACCCCT AACAAACGTGGCCAGTACAGCGACGCAGTCCTGAATGAGCTCGAGAGCCAGAACGATGCGCAGGTGGTGGGGATT ATGGGAAAAGTCAAGACACTCAAGGATATGACAATGGCGATTGGCGATGAAATTCGAGAATCATCGGCTTTGGCG GATAAGATGAACGATTCATTCGACTCAACGCGCCTGCGCCTTCGCGGCACTATGAATCGCATGCTCCTCATGGCC CAGCGCACCGGCATCAGCTGGAGGGTCTGGCTCGCCTTCTTCGCCGCCGTCATTCTTCTCTTTATCTATGTCTGG CTGTTTTGA |
| Gene | >OphauG2|3259 ATGGCGTCAAGGTACGTTGTGCCGCCGACGCTCGAGGCGCCACGTCGCCTCTTGTCGCTGCCCCTATCTTGGCTC CTGATGCTGGCTCCGGATGCTGGCACCCAGGCAAATACATGCTTGCCGAGACAAGTGCTGACAGATGCAGGTTTG GCGGGTCGTCGCTGCATCAGCGCGACTCTCGCAGTGCCTTGTTTGAGGGCTACACGGGCGAGTCGTCAACGCGGC GCACCGCAACAGCAAGTCCTGGTGGCTACGGCTTCCCATCCGCATACGGCCCCAATGCCCCGGGCGCAGCCGGCG CCAATCCCTATGCCGACGGCGTACCGCGCACCGGCAGCGGCTTTCGTCCCGCGACCCCTAACAAACGTGGCCAGT ACAGCGACGCAGTCCTGAATGAGCTCGAGAGCCAGAACGATGCGCAGGTGGTGGGGATTATGGGAAAAGTCAAGA CACTCAAGGATGTAAGCTGCCCTCTTGTTTGCTGGTGCTTTGTCTATTGTCTTTTTTTTTTTTTAAGGGGGGGTT GGGCCAAGGCAGCACGCAACTGACAAGGGCCAACATAACCGCTGCATTAGATGACAATGGCGATTGGCGATGAAA TTCGAGAATCATCGGCTTTGGCGGATAAGATGAACGATTCATTCGACTCAACGCGCCTGCGCCTTCGCGGCACTA TGAATCGCATGCTCCTCATGGCCCAGCGCACCGGCATCAGCTGGAGGGTCTGGCTCGCCTTCTTCGCCGCCGTCA TTCTTCTCTTTATCTATGTCTGGCTGTTTTGA |