© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3256 |
| Gene name | |
| Location | Contig_242:605..3035 |
| Strand | - |
| Gene length (bp) | 2430 |
| Transcript length (bp) | 2292 |
| Coding sequence length (bp) | 2292 |
| Protein length (aa) | 764 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09359 | VTC | VTC domain | 1.9E-89 | 222 | 497 |
| PF02656 | DUF202 | Domain of unknown function (DUF202) | 7.5E-11 | 648 | 711 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02725|VTC3_YEAST | Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 | 1 | 749 | 4.0E-145 |
| sp|O13718|VTC2_SCHPO | Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 | 1 | 756 | 6.0E-144 |
| sp|P43585|VTC2_YEAST | Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 | 1 | 749 | 8.0E-138 |
| sp|P47075|VTC4_YEAST | Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 | 1 | 742 | 8.0E-105 |
| sp|P78810|VTC4_SCHPO | Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 | 1 | 746 | 4.0E-103 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02725|VTC3_YEAST | Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 | 1 | 749 | 4.0E-145 |
| sp|O13718|VTC2_SCHPO | Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 | 1 | 756 | 6.0E-144 |
| sp|P43585|VTC2_YEAST | Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 | 1 | 749 | 8.0E-138 |
| sp|P47075|VTC4_YEAST | Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 | 1 | 742 | 8.0E-105 |
| sp|P78810|VTC4_SCHPO | Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 | 1 | 746 | 4.0E-103 |
| sp|Q9UR17|VTC1_SCHPO | Vacuolar transporter chaperone 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nrf1 PE=2 SV=1 | 643 | 744 | 5.0E-13 |
| sp|P40046|VTC1_YEAST | Vacuolar transporter chaperone 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC1 PE=1 SV=3 | 644 | 753 | 6.0E-08 |
| sp|Q94A21|SPX4_ARATH | SPX domain-containing protein 4 OS=Arabidopsis thaliana GN=SPX4 PE=2 SV=1 | 1 | 177 | 2.0E-07 |
| sp|Q7Y0F6|SPX5_ORYSJ | SPX domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=SPX5 PE=2 SV=1 | 1 | 184 | 2.0E-07 |
| sp|A2XHU0|SPX5_ORYSI | SPX domain-containing protein 5 OS=Oryza sativa subsp. indica GN=SPX5 PE=3 SV=1 | 1 | 184 | 2.0E-07 |
| sp|Q8LBH4|SPX1_ARATH | SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2 | 1 | 174 | 3.0E-07 |
| sp|Q5PP62|SPX3_ARATH | SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1 | 1 | 174 | 8.0E-07 |
| sp|A2X254|SPX2_ORYSI | SPX domain-containing protein 2 OS=Oryza sativa subsp. indica GN=SPX2 PE=3 SV=1 | 1 | 180 | 2.0E-06 |
| sp|Q6Z784|SPX2_ORYSJ | SPX domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=SPX2 PE=2 SV=1 | 1 | 180 | 2.0E-06 |
| sp|A8DZH4|XPR1_DANRE | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Danio rerio GN=xpr1 PE=3 SV=1 | 1 | 213 | 2.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 682 | 704 | 22 |
| 2 | 724 | 746 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3256 MRFGKTLREAVYEPWKDKYIDYGKLKELLHEERLDDEGSVAWTEDDENRFCDEIFNVQLEKVARFQQERFDALKQ RVDAAFDRLKELAPPSKDEEQRQQQQQGDDGNGDASGDARLRQLEKDVDDITNEVRELKKYSSINYTGFLKIVKK HDRKRGDRYRVRPMMQLSLAQRPFNSEQAYSPLLNKLSIMYFAMRQQREGGQEQPPLDLDAPAETHKGERYTASK FWVHPDNLLEVKTLILRHLPALVYSEQSAKELDANNSPPITSLYFDNRKFDLYSEKVERQSEASSLRLRWYGQLS SRPEIFVEQKTADAKGNSREYRFTIKDKWVKPFLDGKYAMEKSVHKMERQGASAEQIDEFKRTVARIHDFLQQKK LSPVLRANYSRTAFQKPADDRVRISIDTDVAFVREDTLDADRPCRDPNDWHRPDIDSSNMTYPFGNINQSEVSKF PYAVLEIKLRDDGNRKRYSWVDDLTTSHLVHPAPRFSKFVHGVASLFEDYVNNLPFWLSDLERDIRKDPQRAFEE EEQRRAQRAEDVNAVGSLIGTKGSSYKATQSSPLGTSYLTDRMAADSRASPWRVLPREGDQGPSTEPSQQQRPGY GTLSAVIPGLSLSKYSRARRGQKVPLPEGVVKPTEWLKNMGEIKVEPKVWLANERTFLKWQHICILQGGLAIGLY TAAGKDTVAEAMGILYVGIAAFAGIWGYSMLRTRRTMILERSGKDFDNMLGPIVISVALMAALIINFVLAYRKAF AKLASPRPASMTL* |
| Coding | >OphauG2|3256 ATGCGGTTTGGAAAGACCTTGCGAGAGGCCGTGTATGAGCCATGGAAAGACAAATACATAGACTACGGGAAGCTC AAGGAGCTGCTGCACGAGGAAAGGCTTGACGACGAGGGCAGTGTGGCTTGGACAGAGGATGACGAGAACCGATTC TGCGATGAAATCTTCAACGTGCAGCTTGAAAAGGTGGCACGCTTTCAGCAGGAGCGGTTTGATGCGCTCAAGCAG AGGGTGGATGCAGCGTTTGATAGACTCAAGGAGCTTGCGCCGCCCAGCAAGGACGAGGAGCAGCGGCAACAACAG CAACAAGGCGACGACGGCAATGGCGACGCCAGTGGCGACGCACGCCTCCGCCAGCTGGAAAAGGACGTCGACGAC ATCACCAACGAGGTGCGCGAGCTCAAGAAATACAGCAGCATCAACTATACTGGCTTCCTCAAAATCGTCAAAAAG CACGACCGCAAGCGTGGAGACCGGTACCGCGTTCGGCCCATGATGCAGCTCAGCCTTGCCCAGCGGCCCTTCAAC TCGGAACAGGCATACTCGCCCTTGCTCAACAAGCTGTCCATTATGTATTTTGCCATGCGACAGCAGCGCGAGGGC GGCCAAGAGCAGCCGCCCCTAGACTTGGACGCTCCGGCCGAGACACACAAGGGCGAGCGCTATACCGCTTCCAAG TTTTGGGTGCACCCCGACAATCTGCTCGAAGTCAAGACGCTCATTCTCCGCCACCTCCCCGCGCTGGTGTATAGC GAGCAGTCGGCAAAGGAGCTCGACGCCAACAACTCGCCGCCCATTACGTCGCTGTATTTCGACAACCGCAAGTTT GATCTCTACTCGGAAAAGGTGGAGCGCCAGTCGGAAGCCTCGTCGCTTCGGCTACGCTGGTACGGCCAGCTGAGC AGCCGACCAGAAATCTTTGTCGAGCAAAAGACTGCCGACGCCAAGGGCAACAGCCGCGAATACCGCTTCACCATC AAGGACAAGTGGGTCAAGCCGTTTTTGGATGGCAAATATGCCATGGAAAAGAGCGTGCACAAGATGGAGCGCCAG GGCGCATCGGCCGAGCAGATTGACGAGTTCAAGCGCACCGTTGCCCGAATCCACGACTTTTTGCAGCAAAAGAAG CTGTCGCCTGTTCTGCGGGCCAACTACTCGCGCACAGCCTTTCAGAAGCCGGCCGACGACCGCGTGCGCATCTCG ATTGACACCGACGTGGCCTTTGTGCGTGAAGACACGCTCGACGCCGACAGGCCATGTCGCGACCCCAATGACTGG CACCGGCCCGACATTGACAGCAGCAACATGACGTATCCCTTTGGCAACATCAACCAGAGCGAGGTGTCCAAGTTT CCCTATGCCGTGCTCGAGATCAAGCTGCGTGACGACGGCAACCGCAAGCGCTACTCGTGGGTTGACGACTTGACC ACGTCGCACCTGGTGCACCCGGCGCCGCGCTTCTCCAAGTTTGTCCATGGCGTGGCGTCGCTCTTTGAGGACTAT GTCAACAACCTGCCCTTTTGGCTCAGCGACCTGGAGCGGGACATTCGCAAGGATCCCCAGCGCGCCTTTGAAGAG GAGGAGCAGCGACGCGCCCAGCGAGCCGAAGACGTCAATGCTGTCGGCAGTCTGATTGGCACCAAGGGCAGCTCG TACAAGGCCACGCAAAGCTCTCCTCTCGGCACGTCGTATCTGACGGATCGCATGGCTGCCGACTCGCGTGCCTCG CCCTGGCGTGTGCTGCCCAGAGAGGGCGACCAAGGCCCGTCGACCGAGCCGTCGCAGCAGCAGCGACCCGGCTAC GGCACTCTGTCGGCCGTCATTCCCGGCCTGTCGCTGTCCAAGTATTCTCGGGCGCGGCGCGGCCAAAAGGTACCG CTGCCCGAGGGCGTGGTGAAGCCGACTGAGTGGCTCAAGAACATGGGCGAGATCAAGGTTGAGCCCAAGGTTTGG CTGGCCAATGAGCGCACCTTTCTCAAGTGGCAACACATTTGCATTCTGCAGGGCGGACTGGCCATTGGTCTCTAC ACGGCAGCGGGTAAGGACACAGTGGCTGAGGCCATGGGCATCCTCTACGTTGGCATTGCTGCCTTTGCTGGCATC TGGGGCTATTCGATGCTGCGCACCCGCCGCACCATGATTTTGGAGCGAAGCGGCAAGGACTTTGACAATATGCTT GGGCCCATTGTCATTAGTGTAGCTCTCATGGCGGCACTGATTATAAACTTTGTCTTGGCATATCGCAAAGCATTT GCCAAGCTGGCATCGCCCCGCCCGGCGTCAATGACACTATGA |
| Transcript | >OphauG2|3256 ATGCGGTTTGGAAAGACCTTGCGAGAGGCCGTGTATGAGCCATGGAAAGACAAATACATAGACTACGGGAAGCTC AAGGAGCTGCTGCACGAGGAAAGGCTTGACGACGAGGGCAGTGTGGCTTGGACAGAGGATGACGAGAACCGATTC TGCGATGAAATCTTCAACGTGCAGCTTGAAAAGGTGGCACGCTTTCAGCAGGAGCGGTTTGATGCGCTCAAGCAG AGGGTGGATGCAGCGTTTGATAGACTCAAGGAGCTTGCGCCGCCCAGCAAGGACGAGGAGCAGCGGCAACAACAG CAACAAGGCGACGACGGCAATGGCGACGCCAGTGGCGACGCACGCCTCCGCCAGCTGGAAAAGGACGTCGACGAC ATCACCAACGAGGTGCGCGAGCTCAAGAAATACAGCAGCATCAACTATACTGGCTTCCTCAAAATCGTCAAAAAG CACGACCGCAAGCGTGGAGACCGGTACCGCGTTCGGCCCATGATGCAGCTCAGCCTTGCCCAGCGGCCCTTCAAC TCGGAACAGGCATACTCGCCCTTGCTCAACAAGCTGTCCATTATGTATTTTGCCATGCGACAGCAGCGCGAGGGC GGCCAAGAGCAGCCGCCCCTAGACTTGGACGCTCCGGCCGAGACACACAAGGGCGAGCGCTATACCGCTTCCAAG TTTTGGGTGCACCCCGACAATCTGCTCGAAGTCAAGACGCTCATTCTCCGCCACCTCCCCGCGCTGGTGTATAGC GAGCAGTCGGCAAAGGAGCTCGACGCCAACAACTCGCCGCCCATTACGTCGCTGTATTTCGACAACCGCAAGTTT GATCTCTACTCGGAAAAGGTGGAGCGCCAGTCGGAAGCCTCGTCGCTTCGGCTACGCTGGTACGGCCAGCTGAGC AGCCGACCAGAAATCTTTGTCGAGCAAAAGACTGCCGACGCCAAGGGCAACAGCCGCGAATACCGCTTCACCATC AAGGACAAGTGGGTCAAGCCGTTTTTGGATGGCAAATATGCCATGGAAAAGAGCGTGCACAAGATGGAGCGCCAG GGCGCATCGGCCGAGCAGATTGACGAGTTCAAGCGCACCGTTGCCCGAATCCACGACTTTTTGCAGCAAAAGAAG CTGTCGCCTGTTCTGCGGGCCAACTACTCGCGCACAGCCTTTCAGAAGCCGGCCGACGACCGCGTGCGCATCTCG ATTGACACCGACGTGGCCTTTGTGCGTGAAGACACGCTCGACGCCGACAGGCCATGTCGCGACCCCAATGACTGG CACCGGCCCGACATTGACAGCAGCAACATGACGTATCCCTTTGGCAACATCAACCAGAGCGAGGTGTCCAAGTTT CCCTATGCCGTGCTCGAGATCAAGCTGCGTGACGACGGCAACCGCAAGCGCTACTCGTGGGTTGACGACTTGACC ACGTCGCACCTGGTGCACCCGGCGCCGCGCTTCTCCAAGTTTGTCCATGGCGTGGCGTCGCTCTTTGAGGACTAT GTCAACAACCTGCCCTTTTGGCTCAGCGACCTGGAGCGGGACATTCGCAAGGATCCCCAGCGCGCCTTTGAAGAG GAGGAGCAGCGACGCGCCCAGCGAGCCGAAGACGTCAATGCTGTCGGCAGTCTGATTGGCACCAAGGGCAGCTCG TACAAGGCCACGCAAAGCTCTCCTCTCGGCACGTCGTATCTGACGGATCGCATGGCTGCCGACTCGCGTGCCTCG CCCTGGCGTGTGCTGCCCAGAGAGGGCGACCAAGGCCCGTCGACCGAGCCGTCGCAGCAGCAGCGACCCGGCTAC GGCACTCTGTCGGCCGTCATTCCCGGCCTGTCGCTGTCCAAGTATTCTCGGGCGCGGCGCGGCCAAAAGGTACCG CTGCCCGAGGGCGTGGTGAAGCCGACTGAGTGGCTCAAGAACATGGGCGAGATCAAGGTTGAGCCCAAGGTTTGG CTGGCCAATGAGCGCACCTTTCTCAAGTGGCAACACATTTGCATTCTGCAGGGCGGACTGGCCATTGGTCTCTAC ACGGCAGCGGGTAAGGACACAGTGGCTGAGGCCATGGGCATCCTCTACGTTGGCATTGCTGCCTTTGCTGGCATC TGGGGCTATTCGATGCTGCGCACCCGCCGCACCATGATTTTGGAGCGAAGCGGCAAGGACTTTGACAATATGCTT GGGCCCATTGTCATTAGTGTAGCTCTCATGGCGGCACTGATTATAAACTTTGTCTTGGCATATCGCAAAGCATTT GCCAAGCTGGCATCGCCCCGCCCGGCGTCAATGACACTATGA |
| Gene | >OphauG2|3256 ATGCGGTTTGGAAAGACCTTGCGAGAGGCCGTGTATGAGCCATGGAAAGACAAATACATAGACTACGGGAAGCTC AAGGAGCTGCTGCACGAGGAAAGGCTTGACGACGAGGGCAGTGTGGCTTGGACAGAGGATGACGAGAACCGATTC TGCGATGAAATCTTCAACGTGCAGCTTGAAAAGGTGGCACGCTTTCAGCAGGAGCGGTTTGATGCGCTCAAGCAG AGGGTGGATGCAGCGTTTGATAGACTCAAGGAGCTTGCGCCGCCCAGCAAGGACGAGGAGCAGCGGCAACAACAG CAACAAGGCGACGACGGCAATGGCGACGCCAGTGGCGACGCACGCCTCCGCCAGCTGGAAAAGGACGTCGACGAC ATCACCAACGAGGTGCGCGAGCTCAAGAAATACAGCAGCATCAACTATACTGGCTTCCTCAAAATCGTCAAAAAG CACGACCGCAAGCGTGGAGACCGGTACCGCGTTCGGCCCATGATGCAGCTCAGCCTTGCCCAGCGGCCCTTCAAC TCGGAACAGGCATACTCGCCCTTGCTCAACAAGCTGTCCATTATGTATTTTGCCATGCGACAGCAGCGCGAGGGC GGCCAAGAGCAGCCGCCCCTAGACTTGGACGCTCCGGCCGAGACACACAAGGGCGAGCGCTATACCGCTTCCAAG TGTAAGTTGATGGCGTCGCCAAGTCTGCGTCGAGCTAACAGCAAGCAGTTTGGGTGCACCCCGACAATCTGCTCG AAGTCAAGACGCTCATTCTCCGCCACCTCCCCGCGCTGGTGTATAGCGAGCAGTCGGCAAAGGAGCTCGACGCCA ACAACTCGCCGCCCATTACGTCGCTGTATTTCGACAACCGCAAGTTTGATCTCTACTCGGAAAAGGTGGAGCGCC AGTCGGAAGCCTCGTCGCTTCGGCTACGCTGGTACGGCCAGCTGAGCAGCCGACCAGAAATCTTTGTCGAGCAAA AGACTGCCGACGCCAAGGGCAACAGCCGCGAATACCGCTTCACCATCAAGGACAAGTGGGTCAAGCCGTTTTTGG ATGGCAAATATGCCATGGAAAAGAGCGTGCACAAGATGGAGCGCCAGGGCGCATCGGCCGAGCAGATTGACGAGT TCAAGCGCACCGTTGCCCGAATCCACGACTTTTTGCAGCAAAAGAAGCTGTCGCCTGTTCTGCGGGCCAACTACT CGCGCACAGCCTTTCAGAAGCCGGCCGACGACCGCGTGCGCATCTCGATTGACACCGACGTGGCCTTTGTGCGTG AAGACACGCTCGACGCCGACAGGCCATGTCGCGACCCCAATGACTGGCACCGGCCCGACATTGACAGCAGCAACA TGACGTATCCCTTTGGCAACATCAACCAGAGCGAGGTGTCCAAGTTTCCCTATGCCGTGCTCGAGATCAAGCTGC GTGACGACGGCAACCGCAAGCGCTACTCGTGGGTTGACGACTTGACCACGTCGCACCTGGTGCACCCGGCGCCGC GCTTCTCCAAGTTTGTCCATGGCGTGGCGTCGCTCTTTGAGGACTATGTCAACAACCTGCCCTTTTGGCTCAGCG ACCTGGAGCGGGACATTCGCAAGGATCCCCAGCGCGCCTTTGAAGAGGAGGAGCAGCGACGCGCCCAGCGAGCCG AAGACGTCAATGCTGTCGGCAGTCTGATTGGCACCAAGGGCAGCTCGTACAAGGCCACGCAAAGCTCTCCTCTCG GCACGTCGTATCTGACGGATCGCATGGCTGCCGACTCGCGTGCCTCGCCCTGGCGTGTGCTGCCCAGAGAGGGCG ACCAAGGCCCGTCGACCGAGCCGTCGCAGCAGCAGCGACCCGGCTACGGCACTCTGTCGGCCGTCATTCCCGGCC TGTCGCTGTCCAAGTATTCTCGGGCGCGGCGCGGCCAAAAGGTACCGCTGCCCGAGGGCGTGGTGAAGCCGACTG AGTGGCTCAAGAACATGGGCGAGATCAAGGTTGAGCCCAAGGTTTGGCTGGCCAATGAGCGCACCTTTCTCAAGT GGCAACACATTTGCATTCTGCAGGGCGGACTGGCCATTGGTCTCTACACGGCAGCGGGTAAGGACACAGTGGCTG AGGCCATGGGCATCCTCTACGTTGGCATTGCTGCCTTTGCTGGCATCTGGGGCTATTCGATGCTGCGCACCCGCC GCACCATGATTTTGGAGCGAAGCGGCAAGGACTTTGACAATATGCTTGGGCCCATTGTCATTAGTGTAGCTCTCA TGGCGGCACTGATTATAAACTTTGTCTTGGCAGTAAGTGTCGCGTGTTGTTGCTCTCAGTCTTTGTTTGGTCATC TCGATGGCCTCGGGCCATTTTGCTCAAGCTGACCAAGTCAAACAACAGTATCGCAAAGCATTTGCCAAGCTGGCA TCGCCCCGCCCGGCGTCAATGACACTATGA |