© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3223 |
| Gene name | |
| Location | Contig_24:5851..7764 |
| Strand | + |
| Gene length (bp) | 1913 |
| Transcript length (bp) | 1608 |
| Coding sequence length (bp) | 1608 |
| Protein length (aa) | 536 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.6E-17 | 118 | 375 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.1E-10 | 397 | 522 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P46996|YJQ3_YEAST | Uncharacterized membrane protein YJL163C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL163C PE=1 SV=1 | 116 | 491 | 2.0E-20 |
| sp|O13714|YDZ7_SCHPO | Uncharacterized membrane protein C14C4.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC14C4.07 PE=1 SV=1 | 48 | 513 | 3.0E-17 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 123 | 502 | 2.0E-10 |
| sp|Q7ZWG6|PCFT_DANRE | Proton-coupled folate transporter OS=Danio rerio GN=slc46a1 PE=2 SV=1 | 69 | 487 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 104 | 123 | 19 |
| 3 | 138 | 160 | 22 |
| 4 | 167 | 189 | 22 |
| 5 | 204 | 226 | 22 |
| 6 | 233 | 255 | 22 |
| 7 | 326 | 348 | 22 |
| 8 | 355 | 377 | 22 |
| 9 | 401 | 420 | 19 |
| 10 | 427 | 449 | 22 |
| 11 | 464 | 486 | 22 |
| 12 | 493 | 512 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3223 MPSIQRHGTTERDSLLGENGQVVGATREPSEQSWWRTPSVYWLIGPFFLFTLTFAGILVPKLNLMLELICRKHLA ERASTTQSLSVLVGVDDAQCKAPDIQRRVATLSLFMNLITGGLSAVTAPKIGHLSDGYGRLRLLALASCGGLLGE LVTVLVAKFPDTIDYRWLLLGAAFDGLGGSFTTGSILSQSYTSDCTPPSRRSVSVGYIQACLFSGMAFGPVIAGY FAKWTGSLLSVFYVVIVSHFVLILFTGLLVPESVSKDNRLLVRQRWRKEKEARALGVAPSLSSTRQKWNPLAPLA ILWPTGPGTSKLRVNLLALAMCDTTIMGGAISATAVVILYAEYTFNWGNLETSRFVSAMSLMRVIILMGVFPAVN YFGRVRPRRGRTATHDTNSGSDRLDGWLLRFALLCEVLGCVGYTFSRTEPLFFGSGFITAFGALGMATTQAALTK HVPAERVGQVLGAVGMLHALARVVGPVIFSGLYAATVGSFPQAIFVALCVMYGIALAVSFVVKPGVHWEGEEQTG SGDAADVVVQ* |
| Coding | >OphauG2|3223 ATGCCTTCGATTCAGAGACACGGCACGACTGAGCGCGATTCCTTACTCGGCGAGAATGGCCAAGTCGTTGGAGCT ACTCGTGAGCCCTCAGAGCAGTCCTGGTGGCGCACGCCATCTGTCTATTGGCTTATTGGGCCCTTTTTCCTCTTT ACCCTGACCTTTGCAGGCATCTTGGTCCCCAAGCTCAATCTCATGCTCGAACTCATCTGCCGCAAGCACCTCGCA GAAAGGGCGTCGACAACACAGTCATTGTCAGTCCTTGTGGGCGTCGACGATGCACAGTGCAAGGCGCCAGATATT CAACGGCGCGTAGCCACGCTGTCTTTATTCATGAACCTCATCACTGGCGGCCTCAGTGCCGTGACGGCCCCCAAG ATTGGCCACCTGTCCGATGGCTACGGCCGTCTAAGGCTGTTGGCGCTCGCCTCTTGCGGCGGCCTACTGGGAGAG CTAGTCACGGTGCTTGTGGCAAAGTTTCCCGACACGATTGACTACCGCTGGCTCCTCCTCGGCGCAGCCTTTGAC GGCTTGGGCGGCTCCTTTACAACTGGCAGCATTCTCAGCCAGTCGTACACGAGCGACTGTACGCCTCCCTCTCGG CGGTCAGTTTCTGTAGGATACATTCAAGCCTGCCTCTTTAGCGGCATGGCCTTTGGTCCCGTGATTGCCGGATAC TTTGCCAAGTGGACTGGCAGCCTGTTGTCCGTCTTTTACGTGGTTATTGTCAGCCATTTCGTGCTAATTCTCTTC ACGGGCCTGCTTGTGCCTGAGTCTGTTTCAAAGGACAACCGGCTCTTGGTTCGACAGCGATGGCGCAAGGAAAAG GAAGCTCGCGCCCTCGGTGTGGCGCCGTCGTTGTCAAGCACGCGGCAAAAGTGGAATCCCCTGGCTCCTCTGGCA ATCCTCTGGCCCACAGGCCCTGGCACGTCGAAACTGCGCGTCAACTTGCTGGCGCTGGCCATGTGCGACACAACC ATCATGGGGGGCGCCATTTCTGCGACAGCAGTTGTGATTTTATACGCCGAGTACACCTTTAACTGGGGGAACCTC GAGACGTCTAGATTTGTATCAGCCATGTCTTTGATGCGCGTAATTATTCTCATGGGCGTCTTCCCAGCCGTCAAT TACTTCGGGCGCGTACGACCAAGGCGAGGCCGGACGGCGACCCACGATACCAACTCTGGCTCTGATAGGCTCGAT GGCTGGCTCCTGCGCTTTGCCCTCTTGTGCGAAGTGCTGGGCTGCGTTGGCTACACCTTTAGTCGGACGGAGCCT CTCTTCTTCGGCAGTGGCTTCATTACGGCCTTTGGCGCGCTTGGCATGGCTACCACACAAGCTGCCCTGACCAAG CACGTCCCAGCAGAGCGCGTGGGCCAGGTGCTCGGTGCCGTGGGCATGTTGCACGCCCTGGCCAGAGTTGTTGGG CCCGTCATCTTCAGCGGCTTATATGCCGCAACTGTCGGAAGCTTTCCACAGGCCATTTTTGTCGCTCTTTGCGTC ATGTATGGCATTGCGCTTGCCGTTAGTTTTGTGGTCAAGCCGGGTGTCCACTGGGAGGGAGAGGAGCAAACTGGA TCTGGAGATGCAGCCGACGTAGTGGTGCAGTAA |
| Transcript | >OphauG2|3223 ATGCCTTCGATTCAGAGACACGGCACGACTGAGCGCGATTCCTTACTCGGCGAGAATGGCCAAGTCGTTGGAGCT ACTCGTGAGCCCTCAGAGCAGTCCTGGTGGCGCACGCCATCTGTCTATTGGCTTATTGGGCCCTTTTTCCTCTTT ACCCTGACCTTTGCAGGCATCTTGGTCCCCAAGCTCAATCTCATGCTCGAACTCATCTGCCGCAAGCACCTCGCA GAAAGGGCGTCGACAACACAGTCATTGTCAGTCCTTGTGGGCGTCGACGATGCACAGTGCAAGGCGCCAGATATT CAACGGCGCGTAGCCACGCTGTCTTTATTCATGAACCTCATCACTGGCGGCCTCAGTGCCGTGACGGCCCCCAAG ATTGGCCACCTGTCCGATGGCTACGGCCGTCTAAGGCTGTTGGCGCTCGCCTCTTGCGGCGGCCTACTGGGAGAG CTAGTCACGGTGCTTGTGGCAAAGTTTCCCGACACGATTGACTACCGCTGGCTCCTCCTCGGCGCAGCCTTTGAC GGCTTGGGCGGCTCCTTTACAACTGGCAGCATTCTCAGCCAGTCGTACACGAGCGACTGTACGCCTCCCTCTCGG CGGTCAGTTTCTGTAGGATACATTCAAGCCTGCCTCTTTAGCGGCATGGCCTTTGGTCCCGTGATTGCCGGATAC TTTGCCAAGTGGACTGGCAGCCTGTTGTCCGTCTTTTACGTGGTTATTGTCAGCCATTTCGTGCTAATTCTCTTC ACGGGCCTGCTTGTGCCTGAGTCTGTTTCAAAGGACAACCGGCTCTTGGTTCGACAGCGATGGCGCAAGGAAAAG GAAGCTCGCGCCCTCGGTGTGGCGCCGTCGTTGTCAAGCACGCGGCAAAAGTGGAATCCCCTGGCTCCTCTGGCA ATCCTCTGGCCCACAGGCCCTGGCACGTCGAAACTGCGCGTCAACTTGCTGGCGCTGGCCATGTGCGACACAACC ATCATGGGGGGCGCCATTTCTGCGACAGCAGTTGTGATTTTATACGCCGAGTACACCTTTAACTGGGGGAACCTC GAGACGTCTAGATTTGTATCAGCCATGTCTTTGATGCGCGTAATTATTCTCATGGGCGTCTTCCCAGCCGTCAAT TACTTCGGGCGCGTACGACCAAGGCGAGGCCGGACGGCGACCCACGATACCAACTCTGGCTCTGATAGGCTCGAT GGCTGGCTCCTGCGCTTTGCCCTCTTGTGCGAAGTGCTGGGCTGCGTTGGCTACACCTTTAGTCGGACGGAGCCT CTCTTCTTCGGCAGTGGCTTCATTACGGCCTTTGGCGCGCTTGGCATGGCTACCACACAAGCTGCCCTGACCAAG CACGTCCCAGCAGAGCGCGTGGGCCAGGTGCTCGGTGCCGTGGGCATGTTGCACGCCCTGGCCAGAGTTGTTGGG CCCGTCATCTTCAGCGGCTTATATGCCGCAACTGTCGGAAGCTTTCCACAGGCCATTTTTGTCGCTCTTTGCGTC ATGTATGGCATTGCGCTTGCCGTTAGTTTTGTGGTCAAGCCGGGTGTCCACTGGGAGGGAGAGGAGCAAACTGGA TCTGGAGATGCAGCCGACGTAGTGGTGCAGTAA |
| Gene | >OphauG2|3223 ATGCCTTCGATTCAGAGACACGGCACGACTGAGCGCGATTCCTTACTCGGCGAGAATGGCCAAGTCGTTGGAGCT ACTCGTGAGCCCTCAGAGCAGTCCTGGTGGCGCACGCCATCTGTATGTACAACAACCAATATAATACACTGCTGC AAGAAAATCAAAAAAAAGTACTCATTCTACAATCCTAGGTCTATTGGCTTATTGGGCCCTTTTTCCTCTTTACCC TGACCTTTGCAGGCATCTTGGTCCCCAAGCTCAATCTGTGGGAGACTGTCCTGTCCACCACCAAAGGCCGCATGC TAATGAATATTGTGCAATGCGCAGCATGCTCGAACTCATCTGCCGCAAGCACCTCGCAGAAAGGGCGTCGACAAC ACAGTCATTGTCAGTCCTTGTGGGCGTCGACGATGCACAGTGCAAGGCGCCAGATATTCAACGGCGCGTAGCCAC GCTGTCTTTATTCATGAACCTCATCACTGGCGGCCTCAGTGCCGTGACGGCCCCCAAGATTGGCCACCTGTCCGA TGGCTACGGCCGTCTAAGGCTGTTGGCGCTCGCCTCTTGCGGCGGCCTACTGGGAGAGCTAGTCACGGTGCTTGT GGCAAAGTTTCCCGACACGATTGACTACCGCTGGCTCCTCCTCGGCGCAGCCTTTGACGGCTTGGGCGGCTCCTT TACAACTGGCAGCATTCTCAGCCAGTCGTACACGAGCGACTGTACGCCTCCCTCTCGGCGGTCAGTTTCTGTAGG ATACATTCAAGCCTGCCTCTTTAGCGGCATGGCCTTTGGTCCCGTGATTGCCGGATACTTTGCCAAGTGGACTGG CAGCCTGTTGTCCGTCTTTTACGTGGTTATTGTCAGCCATTTCGTGCTAATTCTCTTCACGGGCCTGCTTGTGCC TGAGTCTGTTTCAAAGGACAACCGGCTCTTGGTTCGACAGCGATGGCGCAAGGAAAAGGAAGCTCGCGCCCTCGG TGTGGCGCCGTCGTTGTCAAGCACGCGGCAAAAGTGGAATCCCCTGGCTCCTCTGGCAATCCTCTGGCCCACAGG CCCTGGCACGTCGAAACTGCGCGTCAACTTGCTGGCGCTGGCCATGTGCGACACAACCATCATGGGGGGCGCCAT TTCTGCGACAGCAGTTGTGATTTTATACGCCGAGTACACCTTTAACTGGGGGAACCTCGAGACGTCTAGATTTGT ATCAGCCATGTCTTTGATGCGCGTAATTATTCTCATGGGCGTCTTCCCAGCCGTCAATTACTTCGGGCGCGTACG ACCAAGGCGAGGCCGGACGGCGACCCACGATACCAACTCTGGCTCTGATAGGCTCGATGGCTGGCTCCTGCGCTT TGCCCTCTTGTGCGAAGTGCTGGGCTGCGTTGGCTACACCTTTAGTCGGACGGAGCCTCTCTTCTTCGGCAGTGG CTTCATTACGGCCTTTGGCGCGCTTGGCATGGCTACCACACAAGCTGCCCTGACCAAGCACGTCCCAGCAGAGCG CGTGGGCCAGGTGCTCGGTGCCGTGGGCATGTTGCACGCCCTGGCCAGAGTTGTTGGGCCCGTCATCTTCAGCGG CTTATATGCCGCAACTGTCGGAAGCTTTCCACAGGCCATTTTTGTCGCTCTTTGCGTCATGTATGGCATTGCGCT TGCCGTTAGTTTTGTGGTCAAGCCGGGTGGTAAGCTGAGCCCCGTATTGCCTGTTTTGGGATGCTATGAAGGAAT TGGAATCAAAAGCTAACTGTGTGCGTGTATGTGTGTGTCGACGATTAGTCCACTGGGAGGGAGAGGAGCAAACTG GATCTGGAGATGCAGCCGACGTAGTGGTCAGTGGAGATGAAGTTTGCTTCTAGAGGCACATAGTCAAAGTGTTCC TTCTTGGGCTAAACATGTTAAGTTTATAGGTGCAGTAA |