Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3218
Gene name
Location	Contig_239:17846..18904
Strand	+
Gene length (bp)	1058
Transcript length (bp)	873
Coding sequence length (bp)	873
Protein length (aa)	291

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03061	4HBT	Thioesterase superfamily	1.0E-09	188	259

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9HDW5\|YFW6_SCHPO	UPF0644 protein PB2B4.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB2B4.06 PE=3 SV=2	102	286	9.0E-23
sp\|O74793\|YOUB_SCHPO	Uncharacterized protein C26H8.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC26H8.11c PE=4 SV=1	176	285	2.0E-18
sp\|P53716\|YBJ5_CANAW	Uncharacterized protein CAWG_04269, mitochondrial OS=Candida albicans (strain WO-1) GN=CAWG_04269 PE=2 SV=2	110	281	2.0E-18
sp\|Q5T1C6\|THEM4_HUMAN	Acyl-coenzyme A thioesterase THEM4 OS=Homo sapiens GN=THEM4 PE=1 SV=1	173	278	1.0E-13
sp\|Q3UUI3\|THEM4_MOUSE	Acyl-coenzyme A thioesterase THEM4 OS=Mus musculus GN=Them4 PE=1 SV=1	162	278	3.0E-13

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9HDW5\|YFW6_SCHPO	UPF0644 protein PB2B4.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB2B4.06 PE=3 SV=2	102	286	9.0E-23
sp\|O74793\|YOUB_SCHPO	Uncharacterized protein C26H8.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC26H8.11c PE=4 SV=1	176	285	2.0E-18
sp\|P53716\|YBJ5_CANAW	Uncharacterized protein CAWG_04269, mitochondrial OS=Candida albicans (strain WO-1) GN=CAWG_04269 PE=2 SV=2	110	281	2.0E-18
sp\|Q5T1C6\|THEM4_HUMAN	Acyl-coenzyme A thioesterase THEM4 OS=Homo sapiens GN=THEM4 PE=1 SV=1	173	278	1.0E-13
sp\|Q3UUI3\|THEM4_MOUSE	Acyl-coenzyme A thioesterase THEM4 OS=Mus musculus GN=Them4 PE=1 SV=1	162	278	3.0E-13
sp\|Q566R0\|THEM4_RAT	Acyl-coenzyme A thioesterase THEM4 OS=Rattus norvegicus GN=Them4 PE=2 SV=1	162	278	4.0E-13
sp\|P38172\|MRX3_YEAST	MIOREX complex component 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRX3 PE=1 SV=1	137	256	9.0E-13
sp\|A1A4L1\|THEM4_BOVIN	Acyl-coenzyme A thioesterase THEM4 OS=Bos taurus GN=THEM4 PE=2 SV=1	163	278	4.0E-11
sp\|Q6GLK2\|THEM4_XENLA	Acyl-coenzyme A thioesterase THEM4 OS=Xenopus laevis GN=them4 PE=2 SV=2	162	278	3.0E-09
sp\|P40098\|FMP10_YEAST	Uncharacterized mitochondrial membrane protein FMP10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP10 PE=1 SV=1	100	264	2.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 15	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	60	82	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3218 MIIRRQLGRGAWRLAQQQCRGRGRGRSYATAKPEPAAASAAESSSSSAAAANGGRAAKMAGLALFGAAMGIAGAA AAWKVVTAKGMGFYSDEESLTRFSPSDADDEARRIYQAIESHPLVAQLRSRPDLTESRPHLKMPASYRRQSLTAN ALAGPRRVPVPAIAWTQANGQSVALIVYAGPELCGHPGLLHGGFLATLLDEGLAWCCFAALPHGIGVTARLAIDY RKPAPAGSLLLLRGETVKVEGRKAWVKGRVELLDEEGEKKEPVVVAEAEALYVSPRQAALMPRLR*
Coding	>OphauG2\|3218 ATGATTATCCGACGGCAACTAGGACGCGGCGCATGGCGGCTGGCACAGCAGCAGTGTCGAGGACGAGGCCGAGGA CGAAGCTACGCCACGGCCAAACCCGAGCCAGCAGCAGCATCAGCAGCAGAATCATCATCATCATCAGCAGCAGCA GCAAACGGCGGCAGGGCTGCAAAGATGGCCGGGCTGGCTCTCTTTGGAGCGGCCATGGGCATAGCCGGAGCAGCA GCAGCATGGAAAGTCGTCACCGCCAAGGGCATGGGCTTCTACTCTGACGAGGAGAGCCTGACGCGATTCTCGCCA TCCGACGCCGACGACGAGGCGCGCCGCATCTACCAAGCCATTGAATCGCACCCCCTCGTCGCGCAGCTGCGCTCG CGCCCCGACCTGACGGAATCGCGCCCCCATCTCAAGATGCCCGCGTCGTACCGCCGCCAAAGCCTAACAGCCAAC GCGCTGGCCGGCCCGCGACGCGTGCCCGTGCCCGCCATTGCATGGACGCAGGCAAACGGGCAGTCGGTGGCGCTC ATAGTCTACGCCGGCCCAGAGCTGTGCGGACACCCGGGGCTGCTTCACGGCGGCTTCCTGGCCACGCTGCTGGAT GAGGGCTTGGCGTGGTGCTGCTTTGCGGCGCTGCCGCATGGCATCGGGGTGACGGCGCGGCTGGCAATTGATTAT CGAAAGCCGGCGCCCGCGGGCAGTCTGTTGCTGCTGAGGGGGGAGACGGTAAAGGTGGAGGGGAGGAAGGCTTGG GTCAAGGGGAGGGTGGAGTTGTTGGATGAGGAGGGGGAGAAGAAGGAGCCGGTCGTGGTGGCTGAGGCGGAAGCG TTGTATGTGTCGCCTCGACAGGCAGCCTTGATGCCGCGACTTCGCTAA
Transcript	>OphauG2\|3218 ATGATTATCCGACGGCAACTAGGACGCGGCGCATGGCGGCTGGCACAGCAGCAGTGTCGAGGACGAGGCCGAGGA CGAAGCTACGCCACGGCCAAACCCGAGCCAGCAGCAGCATCAGCAGCAGAATCATCATCATCATCAGCAGCAGCA GCAAACGGCGGCAGGGCTGCAAAGATGGCCGGGCTGGCTCTCTTTGGAGCGGCCATGGGCATAGCCGGAGCAGCA GCAGCATGGAAAGTCGTCACCGCCAAGGGCATGGGCTTCTACTCTGACGAGGAGAGCCTGACGCGATTCTCGCCA TCCGACGCCGACGACGAGGCGCGCCGCATCTACCAAGCCATTGAATCGCACCCCCTCGTCGCGCAGCTGCGCTCG CGCCCCGACCTGACGGAATCGCGCCCCCATCTCAAGATGCCCGCGTCGTACCGCCGCCAAAGCCTAACAGCCAAC GCGCTGGCCGGCCCGCGACGCGTGCCCGTGCCCGCCATTGCATGGACGCAGGCAAACGGGCAGTCGGTGGCGCTC ATAGTCTACGCCGGCCCAGAGCTGTGCGGACACCCGGGGCTGCTTCACGGCGGCTTCCTGGCCACGCTGCTGGAT GAGGGCTTGGCGTGGTGCTGCTTTGCGGCGCTGCCGCATGGCATCGGGGTGACGGCGCGGCTGGCAATTGATTAT CGAAAGCCGGCGCCCGCGGGCAGTCTGTTGCTGCTGAGGGGGGAGACGGTAAAGGTGGAGGGGAGGAAGGCTTGG GTCAAGGGGAGGGTGGAGTTGTTGGATGAGGAGGGGGAGAAGAAGGAGCCGGTCGTGGTGGCTGAGGCGGAAGCG TTGTATGTGTCGCCTCGACAGGCAGCCTTGATGCCGCGACTTCGCTAA
Gene	>OphauG2\|3218 ATGATTATCCGACGGCAACTAGGACGCGGCGCATGGCGGCTGGCACAGCAGCAGTGTCGAGGACGAGGCCGAGGA CGAAGCTACGCCACGGCCAAACCCGAGCCAGCAGCAGCATCAGCAGCAGAATCATCATCATCATCAGCAGCAGCA GCAAACGGCGGCAGGGCTGCAAAGATGGCCGGGCTGGCTCTCTTTGGAGCGGCCATGGGCATAGCCGGAGCAGCA GCAGCATGGAAAGTCGTCACCGCCAAGGGCATGGGCTTCTACTCTGACGAGGAGAGCCTGACGCGATTCTCGCCA TCCGACGCCGACGACGAGGCGCGCCGCATCTACCAAGCCATTGAATCGCACCCCCTCGTCGCGCAGCTGCGCTCG CGCCCCGACCTGACGGAATCGCGCCCCCATCTCAAGATGCCCGCGTCGTACCGCCGCCAAAGCCTAACAGCCAAC GCGCTGGCCGGCCCGCGACGCGTGCCCGTGCCCGCCATTGCATGGACGCAGGCAAACGGGCAGTCGGTGGCGCTC ATAGTCTACGCCGGCCCAGAGCTGTGCGGACACCCGGGGCTGCTTCACGGCGGCTTCCTGGCCACGCTGCTGGAT GAGGGCTTGGCGTGGTGCTGCTTTGCGGCGCTGCCGCATGGCATCGGGGTGACGGCGCGGCTGGCAATTGATTAT CGAAAGCCGGCGCCCGCGGGCAGTCTGTTGCTGCTGAGGGGGGAGACGGTAAAGGTGGAGGGGAGGAAGGCTTGG GTCAAGGGGAGGGTGGAGTTGTTGGATGAGGAGGGGGAGAAGAAGGAGCCGGTCGTGGTGGCTGAGGCGGAAGCG TTGTATGTGTCGCCTCGACAGGCAGCCGTGAGTTTTTTTTTTTTTCTTTTTTTCCTCTCTCTCTCTCTATCTCTC TTTTTTTTACACTCTGCATCTGGGATTCTGCATCTTGGATTCCGTCTTGGATTCTGCATCTTGCATTCTGCATCT TGGATTCCGTCTTGGATTCTGCATCTTGGTCTTGTTGGTGCTAACCCTCAAACTCTCTACAGTTGATGCCGCGAC TTCGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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