Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3213
Gene name
Location	Contig_239:10360..11178
Strand	+
Gene length (bp)	818
Transcript length (bp)	678
Coding sequence length (bp)	678
Protein length (aa)	226

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01965	DJ-1_PfpI	DJ-1/PfpI family	1.0E-13	53	190

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q8G9F9\|INHA_PSEPU	Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1	67	194	2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3213 MAKNIHIGVYMAKDCQLLDTAAVDILGCMSKQFVSTLPVQLVANINLDQVPTVKISYITADDQANDITLSSQLMM RATHTIDHQDVAAGKLDIVVIPGPASWDNPDKRALAWLREQYTKGADVLSICTGIFICCDAGIASGKKATGPKSV QKILKDKYPHVDFQGDKYRYLQDGSFWSSGTVTNGNDLLAAYARASSLWPQPVVELVLDIMDTGNRGQTLPNAKV *
Coding	>OphauG2\|3213 ATGGCAAAAAATATTCACATTGGGGTCTACATGGCCAAGGATTGCCAGCTGCTCGACACTGCCGCCGTCGACATC TTGGGCTGCATGTCAAAGCAATTCGTCTCTACTCTTCCTGTCCAACTCGTTGCAAACATCAACTTGGACCAGGTT CCTACCGTCAAGATTAGCTACATCACGGCAGACGACCAAGCCAACGACATAACCCTGTCGTCCCAACTCATGATG CGGGCAACACACACGATTGATCATCAAGACGTGGCGGCGGGAAAGCTCGACATTGTCGTGATTCCAGGCCCGGCC AGCTGGGATAACCCGGATAAAAGAGCGCTGGCCTGGCTGCGCGAGCAGTACACCAAGGGCGCCGACGTCTTGTCC ATTTGCACAGGCATCTTCATCTGCTGCGACGCGGGTATTGCGAGCGGCAAGAAAGCCACGGGTCCCAAGTCCGTT CAAAAGATTCTCAAGGACAAATATCCCCACGTCGATTTCCAGGGAGACAAGTACCGCTATCTCCAGGACGGCAGC TTTTGGTCAAGCGGCACCGTCACCAATGGCAACGACTTGCTGGCAGCTTATGCCCGGGCCAGCAGCCTTTGGCCG CAGCCAGTTGTCGAACTGGTTCTCGACATCATGGATACGGGTAACCGCGGCCAAACATTGCCCAATGCCAAGGTC TGA
Transcript	>OphauG2\|3213 ATGGCAAAAAATATTCACATTGGGGTCTACATGGCCAAGGATTGCCAGCTGCTCGACACTGCCGCCGTCGACATC TTGGGCTGCATGTCAAAGCAATTCGTCTCTACTCTTCCTGTCCAACTCGTTGCAAACATCAACTTGGACCAGGTT CCTACCGTCAAGATTAGCTACATCACGGCAGACGACCAAGCCAACGACATAACCCTGTCGTCCCAACTCATGATG CGGGCAACACACACGATTGATCATCAAGACGTGGCGGCGGGAAAGCTCGACATTGTCGTGATTCCAGGCCCGGCC AGCTGGGATAACCCGGATAAAAGAGCGCTGGCCTGGCTGCGCGAGCAGTACACCAAGGGCGCCGACGTCTTGTCC ATTTGCACAGGCATCTTCATCTGCTGCGACGCGGGTATTGCGAGCGGCAAGAAAGCCACGGGTCCCAAGTCCGTT CAAAAGATTCTCAAGGACAAATATCCCCACGTCGATTTCCAGGGAGACAAGTACCGCTATCTCCAGGACGGCAGC TTTTGGTCAAGCGGCACCGTCACCAATGGCAACGACTTGCTGGCAGCTTATGCCCGGGCCAGCAGCCTTTGGCCG CAGCCAGTTGTCGAACTGGTTCTCGACATCATGGATACGGGTAACCGCGGCCAAACATTGCCCAATGCCAAGGTC TGA
Gene	>OphauG2\|3213 ATGGCAAAAAATATTCACATTGGGGTCTACATGGCCAAGGATTGCCAGCTGCTCGACACTGCCGCCGTCGACATC TTGGGCTGCATGTCAAAGCAATTCGTCTCTACTCTTCCTGTCCAACTCGTTGCAAACATCAACTTGGACCAGGTT CCTACCGTCAAGATTAGCTACATCACGGCAGACGACCAAGCCAACGACATAACCCTGTCGTCCCAACTCATGATG CGGGCAACACACACGATTGATCATCAAGACGTGGCGGCGGGAAAGCTCGACATTGTCGTGATTCCAGGCCCGGCC AGCTGGGATAACCCGGATAAAAGAGCGCTGGCCTGGCTGCGCGAGCAGTACACCAAGGGCGCCGACGTCTTGTCC ATTTGCACAGGCATCTTCATCTGCTGCGACGCGGGTATTGCGAGCGGCAAGAAAGCCACGGGTCCCAAGTCCGTT CAAAAGATTCTCAAGGACAAATATCCCCACGTCGATTTCCAGGGAGACAAGTACCGCTATCTCCAGGACGGCAGC TTTTGGTCAAGCGGTGCGTTGTCTCGGGCTTAGAGTAAAGGGCTCTGCGCAGTGTCTGACTCTTTTTTTTCTTCT AGGCACCGTCACCAATGGCAACGACTTGCTGGCAGCTTATGCCCGGGCCAGCAGCCTTTGGCCGCAGCCAGTTGT CGAACTGGTTCTCGACATCATGGATACGGGTAACCGCGGCCAAACATTGCCCAATGCCAAGGGTGAGTTGAGTCG TCCCGTCCTTGTGCGCTGAGGCAGCATCAAAGCGCTCACAAGTTTTTCTTTTGTTGGCACTAGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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