© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3175 |
| Gene name | |
| Location | Contig_234:15112..15732 |
| Strand | - |
| Gene length (bp) | 620 |
| Transcript length (bp) | 444 |
| Coding sequence length (bp) | 444 |
| Protein length (aa) | 148 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08219 | TOM13 | Outer membrane protein TOM13 | 2.4E-37 | 18 | 96 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8X0G8|MIM1_NEUCR | Mitochondrial import protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B13O8.080 PE=3 SV=1 | 1 | 122 | 9.0E-41 |
| sp|Q08176|MIM1_YEAST | Mitochondrial import protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIM1 PE=1 SV=1 | 7 | 99 | 2.0E-13 |
| sp|P62512|MIM1_ASHGO | Mitochondrial import protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AAR013W PE=3 SV=1 | 30 | 118 | 1.0E-10 |
| sp|Q9C1W7|MIM1_SCHPO | Mitochondrial import protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mim1 PE=3 SV=1 | 46 | 98 | 2.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005741 | mitochondrial outer membrane | Yes |
| GO:0098588 | bounding membrane of organelle | No |
| GO:0031968 | organelle outer membrane | No |
| GO:0019867 | outer membrane | No |
| GO:0016020 | membrane | No |
| GO:0031966 | mitochondrial membrane | No |
| GO:0031090 | organelle membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3175 MDSEDPTSLVAESGATTHSDSEQYSQGEVLSTSPPSSSSPVILYRPPTLWSMLRGAAINLLLPFINGMMLGFGEL FAHEAAFRLGWGGTKVFPLSRRRAHAIGPGIEVRERREKPAVSLRDYASLELGCIFLDGDMMPCHQRFIQSE* |
| Coding | >OphauG2|3175 ATGGACTCGGAAGACCCAACAAGTCTTGTCGCCGAGTCGGGCGCCACCACGCACTCTGACAGCGAACAGTACTCG CAAGGCGAAGTGCTGTCGACATCGCCGCCGTCATCGTCCTCGCCCGTCATTCTGTATCGCCCGCCCACGCTATGG TCCATGCTGCGCGGCGCAGCCATCAATCTACTACTGCCGTTTATCAACGGCATGATGCTAGGTTTTGGCGAATTG TTTGCCCACGAGGCGGCATTTAGACTAGGATGGGGCGGCACAAAGGTCTTTCCGCTTTCACGAAGGAGAGCGCAC GCTATTGGTCCGGGGATCGAGGTGCGGGAACGCCGCGAGAAGCCTGCCGTGTCGCTGAGAGACTACGCAAGTTTG GAACTGGGGTGCATCTTCTTGGATGGCGACATGATGCCGTGTCATCAGAGATTCATTCAAAGCGAATAG |
| Transcript | >OphauG2|3175 ATGGACTCGGAAGACCCAACAAGTCTTGTCGCCGAGTCGGGCGCCACCACGCACTCTGACAGCGAACAGTACTCG CAAGGCGAAGTGCTGTCGACATCGCCGCCGTCATCGTCCTCGCCCGTCATTCTGTATCGCCCGCCCACGCTATGG TCCATGCTGCGCGGCGCAGCCATCAATCTACTACTGCCGTTTATCAACGGCATGATGCTAGGTTTTGGCGAATTG TTTGCCCACGAGGCGGCATTTAGACTAGGATGGGGCGGCACAAAGGTCTTTCCGCTTTCACGAAGGAGAGCGCAC GCTATTGGTCCGGGGATCGAGGTGCGGGAACGCCGCGAGAAGCCTGCCGTGTCGCTGAGAGACTACGCAAGTTTG GAACTGGGGTGCATCTTCTTGGATGGCGACATGATGCCGTGTCATCAGAGATTCATTCAAAGCGAATAG |
| Gene | >OphauG2|3175 ATGGACTCGGAAGACCCAACAAGTCTTGTCGCCGAGTCGGGCGCCACCACGCACTCTGACAGCGAACAGTACTCG CAAGGCGAAGTGCTGTCGACATCGCCGCCGTCATCGTCCTCGCCCGTCATTCTGTATCGCCCGCCCACGCTATGG TCCATGCTGCGCGGCGCAGCCATCAATCTACTACTGCCGTTTATCAACGGCATGATGCTAGGTTTTGGCGAATTG TTTGCCCACGAGGCGGCATTTAGACTAGGATGGGGCGGCACAAAGGTAAGAAATGCGCCTTTATACTCCGCCGCC GTCTTTTTCTTCTTCCTCTTCTTGTGCTTGCGGGCTTTGTTGGATACGGCAAATGTGCTAATGGGGCCAGGTCTT TCCGCTTTCACGAAGGAGAGCGCACGCTATTGGTCCGGGGATCGAGGTGCGGGAACGCCGCGAGAAGCCTGCCGT GTCGCTGAGAGACTACGCAAGTTTGGAGTAGGGGTTTCTTTATTGAATAGAATGGACTGGAAGGCGTGGCTTGTG CAAATACAGTACTGAGAATGGAGTTTAGACTGGGGTGCATCTTCTTGGATGGCGACATGATGCCGTGTCATCAGA GATTCATTCAAAGCGAATAG |