Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3147
Gene name
Location	Contig_231:3737..5273
Strand	+
Gene length (bp)	1536
Transcript length (bp)	1536
Coding sequence length (bp)	1536
Protein length (aa)	512

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00890	FAD_binding_2	FAD binding domain	1.6E-38	10	480

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9Z4P0\|FRD2_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=ifcA PE=1 SV=1	5	500	1.0E-21
sp\|P0C278\|FRDA_SHEFR	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina GN=fccA PE=1 SV=1	22	499	7.0E-17
sp\|Q07WU7\|FRDA_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=fccA PE=1 SV=2	22	499	9.0E-17
sp\|P71864\|3O1D1_MYCTU	3-oxosteroid 1-dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=kstD PE=1 SV=3	164	493	4.0E-16
sp\|Q7D5C1\|3O1D2_MYCTO	3-oxosteroid 1-dehydrogenase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=kstD PE=1 SV=1	164	493	4.0E-16

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9Z4P0\|FRD2_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=ifcA PE=1 SV=1	5	500	1.0E-21
sp\|P0C278\|FRDA_SHEFR	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina GN=fccA PE=1 SV=1	22	499	7.0E-17
sp\|Q07WU7\|FRDA_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=fccA PE=1 SV=2	22	499	9.0E-17
sp\|P71864\|3O1D1_MYCTU	3-oxosteroid 1-dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=kstD PE=1 SV=3	164	493	4.0E-16
sp\|Q7D5C1\|3O1D2_MYCTO	3-oxosteroid 1-dehydrogenase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=kstD PE=1 SV=1	164	493	4.0E-16
sp\|A0R4S9\|3O1D_MYCS2	3-oxosteroid 1-dehydrogenase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=ksdD PE=1 SV=1	164	482	2.0E-14
sp\|Q8CVD0\|URDA_SHEON	Urocanate reductase OS=Shewanella oneidensis (strain MR-1) GN=urdA PE=1 SV=1	5	499	3.0E-14
sp\|P83223\|FRDA_SHEON	Fumarate reductase flavoprotein subunit OS=Shewanella oneidensis (strain MR-1) GN=SO_0970 PE=1 SV=2	300	499	1.0E-13
sp\|O13755\|OSM1_SCHPO	Fumarate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=osm1 PE=3 SV=1	11	498	1.0E-09

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3147 MEHMETTYGVLVVGGGNAAIVAALSAQRLGARVAIFEAAPLAYRGGNSRFSSGIFRIPHSGLSSVMPLLDAHGLA DAEHCQMQPYTKEAYKRDMTRTSKGLCDDDQVHVMLEYAFDTVKWMKHDAGVRWKLPLGKFFHRNQMSTTQDGKV DMPPWDTIMAMDEGTGLMESLWAAVGKTDIQVFYGSPVTDLIADGDSIKGIRVRLRDSTKSFSGQVILGCGGFEA SPSLRRQFLGEGWDLVALRGTRFNTGTMMQKAIAAGAGVAGHFGGCHATPHDLHTPKVLDPKDCDSMSRYSYPYS VMVNTLGRRFMDEGEDHFSLTYAKAGAAIVRQPEATAFQIFDQKTLHLLEPRYSTASPFEDKTLAGLATKLGLDA KVFCDTIRDFNAATPSSACDNFNAFILDGVSTDDRLVIPKSNWALPIDMGPFVAYGVTCGITFTYGGLRTDSAAR VLNQEGLHMPGLWAVGEISGGFFAHNYPGGTGLTRGAVFGRIAGRAAAERWRNVLNNAASS*
Coding	>OphauG2\|3147 ATGGAACACATGGAAACCACCTATGGCGTCCTCGTTGTTGGCGGTGGCAACGCAGCAATCGTAGCCGCCTTGTCT GCCCAACGACTGGGAGCGCGCGTCGCAATCTTTGAAGCGGCACCGCTCGCGTACCGTGGGGGGAATAGCCGCTTC TCGTCAGGCATCTTTCGCATCCCACATTCCGGCCTGTCATCTGTCATGCCACTTCTCGACGCCCATGGACTCGCT GACGCCGAGCATTGCCAGATGCAGCCTTACACAAAAGAGGCGTACAAGCGGGACATGACGCGTACAAGTAAAGGC CTATGTGATGATGACCAAGTGCATGTGATGCTTGAATATGCCTTTGACACGGTCAAGTGGATGAAGCATGATGCC GGCGTCCGATGGAAATTGCCACTGGGAAAGTTTTTTCATCGCAATCAGATGTCGACGACGCAGGACGGCAAAGTG GATATGCCACCATGGGATACCATTATGGCCATGGACGAGGGCACGGGCTTGATGGAGAGCTTATGGGCTGCAGTG GGCAAGACTGACATTCAAGTCTTTTATGGCTCCCCCGTCACTGATTTGATTGCGGATGGAGATAGCATCAAGGGC ATTCGAGTCAGACTGCGTGATTCCACCAAGAGTTTCTCGGGTCAGGTGATCCTTGGCTGCGGAGGATTTGAAGCC TCGCCCAGTCTTCGGAGACAGTTCCTCGGCGAGGGATGGGATCTAGTCGCCCTGCGCGGCACCCGTTTCAACACA GGCACCATGATGCAAAAAGCAATCGCTGCTGGGGCCGGTGTTGCAGGACACTTTGGCGGATGCCATGCTACACCC CATGACCTGCATACCCCCAAAGTACTAGATCCAAAGGACTGTGACAGCATGAGTCGATATAGTTATCCCTACTCT GTCATGGTCAATACGCTGGGTCGCCGCTTCATGGACGAGGGAGAGGACCACTTTAGCCTGACCTATGCCAAGGCT GGAGCAGCCATTGTCCGACAGCCTGAAGCCACAGCCTTTCAAATCTTTGACCAAAAGACGCTGCACCTCCTCGAG CCCCGGTACAGCACCGCATCACCCTTTGAGGACAAGACTCTCGCTGGGCTTGCCACCAAGCTGGGCCTTGATGCC AAAGTCTTTTGCGACACCATCCGTGACTTCAACGCGGCAACTCCATCCTCGGCCTGCGACAACTTCAACGCCTTT ATCCTCGACGGCGTTTCAACAGACGACCGACTCGTCATACCCAAGAGCAACTGGGCCCTACCAATCGACATGGGA CCCTTTGTCGCATATGGTGTGACGTGCGGCATCACTTTTACCTACGGCGGGTTGAGGACCGATTCAGCGGCGCGT GTTTTAAACCAAGAAGGACTACATATGCCTGGCCTTTGGGCAGTGGGCGAAATATCTGGAGGGTTTTTTGCCCAC AACTATCCCGGAGGGACTGGCTTAACCCGGGGGGCAGTGTTTGGGAGAATTGCTGGCCGGGCGGCAGCGGAGAGA TGGAGAAATGTTTTGAACAATGCTGCGTCGTCCTGA
Transcript	>OphauG2\|3147 ATGGAACACATGGAAACCACCTATGGCGTCCTCGTTGTTGGCGGTGGCAACGCAGCAATCGTAGCCGCCTTGTCT GCCCAACGACTGGGAGCGCGCGTCGCAATCTTTGAAGCGGCACCGCTCGCGTACCGTGGGGGGAATAGCCGCTTC TCGTCAGGCATCTTTCGCATCCCACATTCCGGCCTGTCATCTGTCATGCCACTTCTCGACGCCCATGGACTCGCT GACGCCGAGCATTGCCAGATGCAGCCTTACACAAAAGAGGCGTACAAGCGGGACATGACGCGTACAAGTAAAGGC CTATGTGATGATGACCAAGTGCATGTGATGCTTGAATATGCCTTTGACACGGTCAAGTGGATGAAGCATGATGCC GGCGTCCGATGGAAATTGCCACTGGGAAAGTTTTTTCATCGCAATCAGATGTCGACGACGCAGGACGGCAAAGTG GATATGCCACCATGGGATACCATTATGGCCATGGACGAGGGCACGGGCTTGATGGAGAGCTTATGGGCTGCAGTG GGCAAGACTGACATTCAAGTCTTTTATGGCTCCCCCGTCACTGATTTGATTGCGGATGGAGATAGCATCAAGGGC ATTCGAGTCAGACTGCGTGATTCCACCAAGAGTTTCTCGGGTCAGGTGATCCTTGGCTGCGGAGGATTTGAAGCC TCGCCCAGTCTTCGGAGACAGTTCCTCGGCGAGGGATGGGATCTAGTCGCCCTGCGCGGCACCCGTTTCAACACA GGCACCATGATGCAAAAAGCAATCGCTGCTGGGGCCGGTGTTGCAGGACACTTTGGCGGATGCCATGCTACACCC CATGACCTGCATACCCCCAAAGTACTAGATCCAAAGGACTGTGACAGCATGAGTCGATATAGTTATCCCTACTCT GTCATGGTCAATACGCTGGGTCGCCGCTTCATGGACGAGGGAGAGGACCACTTTAGCCTGACCTATGCCAAGGCT GGAGCAGCCATTGTCCGACAGCCTGAAGCCACAGCCTTTCAAATCTTTGACCAAAAGACGCTGCACCTCCTCGAG CCCCGGTACAGCACCGCATCACCCTTTGAGGACAAGACTCTCGCTGGGCTTGCCACCAAGCTGGGCCTTGATGCC AAAGTCTTTTGCGACACCATCCGTGACTTCAACGCGGCAACTCCATCCTCGGCCTGCGACAACTTCAACGCCTTT ATCCTCGACGGCGTTTCAACAGACGACCGACTCGTCATACCCAAGAGCAACTGGGCCCTACCAATCGACATGGGA CCCTTTGTCGCATATGGTGTGACGTGCGGCATCACTTTTACCTACGGCGGGTTGAGGACCGATTCAGCGGCGCGT GTTTTAAACCAAGAAGGACTACATATGCCTGGCCTTTGGGCAGTGGGCGAAATATCTGGAGGGTTTTTTGCCCAC AACTATCCCGGAGGGACTGGCTTAACCCGGGGGGCAGTGTTTGGGAGAATTGCTGGCCGGGCGGCAGCGGAGAGA TGGAGAAATGTTTTGAACAATGCTGCGTCGTCCTGA
Gene	>OphauG2\|3147 ATGGAACACATGGAAACCACCTATGGCGTCCTCGTTGTTGGCGGTGGCAACGCAGCAATCGTAGCCGCCTTGTCT GCCCAACGACTGGGAGCGCGCGTCGCAATCTTTGAAGCGGCACCGCTCGCGTACCGTGGGGGGAATAGCCGCTTC TCGTCAGGCATCTTTCGCATCCCACATTCCGGCCTGTCATCTGTCATGCCACTTCTCGACGCCCATGGACTCGCT GACGCCGAGCATTGCCAGATGCAGCCTTACACAAAAGAGGCGTACAAGCGGGACATGACGCGTACAAGTAAAGGC CTATGTGATGATGACCAAGTGCATGTGATGCTTGAATATGCCTTTGACACGGTCAAGTGGATGAAGCATGATGCC GGCGTCCGATGGAAATTGCCACTGGGAAAGTTTTTTCATCGCAATCAGATGTCGACGACGCAGGACGGCAAAGTG GATATGCCACCATGGGATACCATTATGGCCATGGACGAGGGCACGGGCTTGATGGAGAGCTTATGGGCTGCAGTG GGCAAGACTGACATTCAAGTCTTTTATGGCTCCCCCGTCACTGATTTGATTGCGGATGGAGATAGCATCAAGGGC ATTCGAGTCAGACTGCGTGATTCCACCAAGAGTTTCTCGGGTCAGGTGATCCTTGGCTGCGGAGGATTTGAAGCC TCGCCCAGTCTTCGGAGACAGTTCCTCGGCGAGGGATGGGATCTAGTCGCCCTGCGCGGCACCCGTTTCAACACA GGCACCATGATGCAAAAAGCAATCGCTGCTGGGGCCGGTGTTGCAGGACACTTTGGCGGATGCCATGCTACACCC CATGACCTGCATACCCCCAAAGTACTAGATCCAAAGGACTGTGACAGCATGAGTCGATATAGTTATCCCTACTCT GTCATGGTCAATACGCTGGGTCGCCGCTTCATGGACGAGGGAGAGGACCACTTTAGCCTGACCTATGCCAAGGCT GGAGCAGCCATTGTCCGACAGCCTGAAGCCACAGCCTTTCAAATCTTTGACCAAAAGACGCTGCACCTCCTCGAG CCCCGGTACAGCACCGCATCACCCTTTGAGGACAAGACTCTCGCTGGGCTTGCCACCAAGCTGGGCCTTGATGCC AAAGTCTTTTGCGACACCATCCGTGACTTCAACGCGGCAACTCCATCCTCGGCCTGCGACAACTTCAACGCCTTT ATCCTCGACGGCGTTTCAACAGACGACCGACTCGTCATACCCAAGAGCAACTGGGCCCTACCAATCGACATGGGA CCCTTTGTCGCATATGGTGTGACGTGCGGCATCACTTTTACCTACGGCGGGTTGAGGACCGATTCAGCGGCGCGT GTTTTAAACCAAGAAGGACTACATATGCCTGGCCTTTGGGCAGTGGGCGAAATATCTGGAGGGTTTTTTGCCCAC AACTATCCCGGAGGGACTGGCTTAACCCGGGGGGCAGTGTTTGGGAGAATTGCTGGCCGGGCGGCAGCGGAGAGA TGGAGAAATGTTTTGAACAATGCTGCGTCGTCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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